Personal tools

MacroAPE 1083:7-TGTTTCT

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: 7-TGTTTCT,CNhs13224,BestGuess:IRF4(IRF)/GM12878-IRF4-ChIP-Seq/Homer(0.743952126212434),T:1865.0(72.43%),B:28110.1(60.79%),P:1e-34

Motif matrix
POACGT
1257.37287.21473.71848.575
21.8651.8651736.315124.955
335.4355.59559.681764.29
420.51576.465617.3151150.705
5462.52234.99359.945809.41
61.8651859.4051.8651.865
7665.80550.355123.091025.75

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ovo#MA0126.120.0001110990.05288290.05288297TGTTTCTACTGTTACT-
prd#MA0239.120.0001110990.05288290.05288297TGTTTCTACTGTTACT-
STE12#MA0393.100.0008769270.4174170.2782787TGTTTCTTGTTTCA-
RFX1#MA0365.100.007152993.4048217TGTTTCTGGTTGCTA+
CUP9#MA0288.120.01289736.139117TGTTTCTAATGTGTCA-
che-1#MA0260.100.01371676.5291616TGTTTCTGGTTTC-
mirr#MA0233.100.01562497.4374715TGTTTCTTGTTT-
ara#MA0210.100.01998149.5111615TGTTTCTTGTTA-