Personal tools

MacroAPE 1083:CCCCCTATTA,motif248

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CCCCCTATTA,motif248,CNhs11772,T:1384.0(40.03%),B:20640.3(29.61%),P:1e-38

Motif matrix
POACGT
1125.944989.56128.712139.784
2124.561017.24105.184137.016
3121.792966.032131.48164.696
495.496990.944141.168156.392
5135.632977.104125.944145.32
6137.016153.624142.552950.808
7923.128150.856130.096179.92
8128.712146.704131.48977.104
9148.088138.4123.176974.336
10927.28146.704132.864177.152

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

YER130C#MA0423.102.74954e-050.01308780.02614139CCCCCTATTAACCCCTATT+
GIS1#MA0306.100.0004136740.1969090.1351799CCCCCTATTAACCCCTAAA+
MSN4#MA0342.1-10.0005687230.2707120.1351795CCCCCTATTACCCCT-
RGM1#MA0366.1-10.0005687230.2707120.1351795CCCCCTATTACCCCT-
MSN2#MA0341.1-10.0007972270.379480.1515935CCCCCTATTACCCCT-
RPH1#MA0372.100.004916812.34040.7791128CCCCCTATTAACCCCTAA+
MZF1_5-13#MA0057.120.006253292.976570.8146518CCCCCTATTATTCCCCCTAC-
TBP#MA0108.220.008270293.936660.81465110CCCCCTATTACCCCGCCTTTTATAC-
AG#MA0005.1-10.008343183.971360.8146519CCCCCTATTAACCAAATTTGG-
TBP#MA0108.220.008568484.078590.81465110CCCCCTATTACCCCGCCTTTTATAC-
YML081W#MA0431.100.01134115.398370.9681189CCCCCTATTAACCCCGCAC+
RDS2#MA0362.1-10.01303346.203910.9681187CCCCCTATTACCCCGAG-
MCM1#MA0331.1-20.01323746.301020.9681188CCCCCTATTACCCAATTAGGAA+
YGR067C#MA0425.120.01493057.106930.99341610CCCCCTATTAACCCCACTTTTTTG+
Klf4#MA0039.100.01597227.602770.99341610CCCCCTATTACCTTCCTTTA-
Dr#MA0188.1-30.01671797.957740.9934167CCCCCTATTACCAATTA+