Personal tools

MacroAPE 1083:CNhs12096 bl f2

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CNhs12096_bl_f2

Motif matrix
POACGT
12.3765712449069483174.2788213890675635.41860762805528436.93800490277519
2177.16690594077336.551758668252321455.520459754160139.772880801619193
322.9699921178850843.2669166839611012207.5000509815094515.275045381449193
456.539711700791523.2302566308943685152.1780968759370337.063939957182036
50.66039126183475020.4869177015602503247.864696201409880.0
6249.01200516480490.00.00.0
70.124146652693878150.12414665269387815248.639565206723230.12414665269387815
86.011470370367686145.0641902575030456.9289633964956641.00738114043857
936.10688218435036120.6533420144732486.713540917260665.538240048720689
1089.62118288356214120.5691646463124732.571059810846416.250597824083926
1153.736313945202469.191074125320002111.985807626331474.09880946795104
1229.54029193691984102.19375806384285104.5548008504043312.723154313637899

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Trl#MA0205.100.0009089840.4326760.86535210CAGGGAGCCCGGGAGAGAGCAA-
CTCF#MA0139.170.00242041.15211112CAGGGAGCCCGGTGGCCACCAGGGGGCGCTA+
ESR1#MA0112.240.004589252.18448112CAGGGAGCCCGGAGGTCAGGGTGACCTGGGCC-
IXR1#MA0323.130.005729862.72742112CAGGGAGCCCGGAAGCCGGAAGCGGGG+
INSM1#MA0155.130.006130932.9183219CAGGGAGCCCGGTGTCAGGGGGCG+
GCR2#MA0305.1-10.006386213.0398417CAGGGAGCCCGGAGGAAGC-
ESR2#MA0258.160.00977434.65257112CAGGGAGCCCGGCAAGGTCACGGTGACCTG+
USV1#MA0413.180.01409846.71083112CAGGGAGCCCGGCACAAATTCAGGGGGAATTT-
Stat3#MA0144.130.01438166.8456617CAGGGAGCCCGGTTCCAGGAAG+
opa#MA0456.130.0169238.0553319CAGGGAGCCCGGCAGCGGGGGGTC-
GABPA#MA0062.200.01818698.65694111CAGGGAGCCCGGCCGGAAGTGGC+
MZF1_1-4#MA0056.100.01886448.9794516CAGGGAGCCCGGTGGGGA+
Macho-1#MA0118.100.01908299.0834719CAGGGAGCCCGGTGGGGGGTC+
SPI1#MA0080.2-10.02055159.7824917CAGGGAGCCCGGAGGAAGT+