Personal tools

MacroAPE 1083:IRF2 f1

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: IRF2_f1

Motif matrix
POACGT
111.42399530846545222.5758030857086734.3010903740104714.699111231815309
219.8985248723693863.215282261657654458.619566520471421.266626345501503
373.06185482760361.85122312034834967.3074596855855790.7794623664624615
478.555690526956440.00.87689516227026943.567414310773272
582.561552418864820.00.00.4384475811351347
617.024257396039059.64584678497292352.919747965714643.410147853273267
73.75116263860059630.6118850684774453.215282261657654445.42167003126419
83.70244624069669030.079.297553759303230.0
981.684657256594520.01.31534274340540.0
1081.538508062882830.97432795807807990.00.4871639790390383
1180.953911288035981.0717607538858820.00.9743279580780799
124.38447581135134728.07863237747447445.080655245936835.456236565237229
135.74853495266065233.1075386253648713.12694556372671431.01698085824773
1429.38285785709159414.53972110293989126.58378864899244212.49363239097597

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

IRF2#MA0051.101.12215e-145.34144e-121.06463e-1114GGAAAGTGAAAGCAGGAAAGCGAAACCAAAAC+
IRF1#MA0050.1-11.6081e-097.65454e-077.62836e-0712GGAAAGTGAAAGCAGAAAGCGAAACC+
STAT1#MA0137.106.75755e-083.2166e-052.13706e-0514GGAAAGTGAAAGCAGGAAAACGAAACTG+
tll#MA0459.1-10.0006681160.3180230.15846810GGAAAGTGAAAGCAAAAAGTCAAA+
Dof3#MA0021.1-20.001210230.5760710.229646GGAAAGTGAAAGCAAAAGCG+
AZF1#MA0277.1-20.001900290.904540.3004829GGAAAGTGAAAGCAAAAAAGAAA+
THI2#MA0407.100.002825311.344850.38292814GGAAAGTGAAAGCAGGAAACTCTAAGAAC+
id1#MA0120.110.003374421.606220.40018211GGAAAGTGAAAGCACGAAAAGGAAAA-
SWI4#MA0401.1-30.005849022.784130.616588GGAAAGTGAAAGCAACGCGAAA+
PBF#MA0064.1-20.008130323.870030.7713595GGAAAGTGAAAGCAAAAGC+
Trl#MA0205.1-10.01027324.890030.82295610GGAAAGTGAAAGCAGAGAGAGCAA-
SPT23#MA0388.1-20.01096225.218020.8229568GGAAAGTGAAAGCAGAAATCAA+
STB3#MA0390.100.01127645.367580.82295614GGAAAGTGAAAGCACCAGAGTGAAAAATTTTGGAC-
Klf4#MA0039.1-20.01483317.060540.9362610GGAAAGTGAAAGCATAAAGGAAGG+
MNB1A#MA0053.1-20.01503617.157180.936265GGAAAGTGAAAGCAAAAGC+
ABF1#MA0265.140.0157987.519840.9362612GGAAAGTGAAAGCATCGTATAAAGTGATAA+
INO4#MA0322.1-10.01678127.987840.936269GGAAAGTGAAAGCAGCATGTGAA+
HMG-I/Y#MA0045.130.01776328.455260.9362613GGAAAGTGAAAGCACAACAAATGGAAAAAC+
INO2#MA0321.1-10.01899319.040710.9483999GGAAAGTGAAAGCAGCATGTGAA+