Personal tools

MacroAPE 1083:Motif432

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: motif432

Motif matrix
POACGT
01036711315170
0268228000
0300682280
0400682280
0568228000
06469922123600
0768228000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

FEV#MA0156.100.0001601270.07622030.1519197CAGGAAACAGGAAAT+
SPIB#MA0081.110.001895690.9023480.533836CAGGAAAAGAGGAA+
ETS1#MA0098.1-10.002598151.236720.533836CAGGAAACGGAAA-
ELF5#MA0136.100.002638481.255920.533837CAGGAAAAAGGAAGTA-
Stat3#MA0144.130.002813351.339160.533837CAGGAAATTCCAGGAAG+
STAT1#MA0137.260.003857221.836040.5493267CAGGAAAGGTTTCCGGGAAATG-
NFATC2#MA0152.1-10.004172881.986290.5493266CAGGAAATGGAAAA-
Eip74EF#MA0026.100.004965242.363460.5493267CAGGAAACCGGAAG+
SPI1#MA0080.2-10.005578912.655560.5493266CAGGAAAAGGAAGT+
ttk#MA0460.100.005790042.756060.5493267CAGGAAAAAGGATAAT+
MAC1#MA0326.110.006687593.183290.5768017CAGGAAATGAGCAAA-
RELA#MA0107.1-20.01252735.9630.8600185CAGGAAAGGAAATTCCC-
TEAD1#MA0090.120.01269076.040790.8600187CAGGAAACGGAGGAATGTG-
YRM1#MA0438.100.01570787.476930.904957CAGGAAAACGGAAAT+
dl_2#MA0023.1-20.01631787.767270.904955CAGGAAAGGAAAACCCC-
EDS1#MA0294.1-10.01684518.018250.904956CAGGAAACGGAAAAAT+
ELK1#MA0028.130.01716918.17250.904957CAGGAAAGAGCCGGAAG+
REL#MA0101.1-20.01993139.487280.9952455CAGGAAAGGAAATCCCC-