MacroAPE 1083:REST f1

Full Name: REST_f1

Motif matrix

PO A C G T 1 1682.6341852907099 1215.250506032494 3264.0348894672666 2330.5573469500728 2 1204.438562725072 260.5102595804774 5992.599692688221 1034.9284127473732 3 785.5690371237677 1738.17861758549 5043.2750750412615 925.4541979903299 4 2461.843929943416 3900.1762945378323 214.22717803407187 1916.229525225198 5 1088.9716395557482 1027.116725876913 5304.596633746136 1071.791928562129 6 151.59377747060148 7790.526543295917 276.72720556195367 273.62940141326214 7 149.0440698433637 146.08037484166672 69.28537182254826 8128.067111234196 8 340.6748315898464 1157.1793177912934 6847.93605627366 146.68672208662102 9 298.3970523970728 279.91863875256524 658.6156204792892 7255.545616112633 10 51.4319662265188 8152.387767412032 59.74176623938015 228.91542786387902 11 50.2334001057845 8120.498533691147 50.244588587372334 271.5004053574906 12 4180.914781918158 786.4455124114459 2286.3047974079464 1238.8118360030232 13 1679.2214753719236 1158.107955875621 1037.660866213782 4617.486630279428 14 374.65703427832557 140.86450261189952 7818.402899455532 158.55249139593838 15 86.72079123740112 155.89630121356805 8202.74584779785 47.113987492991384 16 102.53852696973894 98.21827686155525 86.41166831726962 8205.308455593227 17 771.9776690544152 1349.1437676970502 5695.255755224778 676.0997357648076 18 63.89335725303503 8069.1270670054755 186.74588758187545 172.71061590137805 19 170.32506175801834 427.5771306370153 172.86708263519117 7721.707652711475 20 528.393558406054 250.4298733431216 7349.822488356454 363.83100763598287 21 5996.293735640785 838.1151115281431 1392.692760569634 265.37532000261245 22 4667.796515011459 1886.8145816235872 832.7392656220069 1105.1265654837478

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
REST#MA0138.2	-1	2.8833e-37	1.37245e-34	2.74491e-34	21	GGGCGCTGTCCATGGTGCTGAA	GGCGCTGTCCATGGTGCTGAA	-
REST#MA0138.2	-2	1.92286e-21	9.15282e-19	9.15282e-19	19	GGGCGCTGTCCATGGTGCTGAA	GCGCTGTCCATGGTGCTGA	+
D#MA00445.1	-8	0.00446672	2.12616	1	11	GGGCGCTGTCCATGGTGCTGAA	TCCATTGTTCT	+
ROX1#MA0371.1	-8	0.0068876	3.2785	1	12	GGGCGCTGTCCATGGTGCTGAA	CCCATTGTTCTC	+
BAS1#MA0278.1	0	0.010184	4.84759	1	21	GGGCGCTGTCCATGGTGCTGAA	TTGACTTGACTCTGGCTGTGC	-
achi#MA0207.1	-5	0.0118911	5.66016	1	6	GGGCGCTGTCCATGGTGCTGAA	CTGTCA	-
ABF1#MA0265.1	-5	0.0128958	6.1384	1	16	GGGCGCTGTCCATGGTGCTGAA	TCGTATAAAGTGATAA	+
hth#MA0227.1	-5	0.0171925	8.18363	1	6	GGGCGCTGTCCATGGTGCTGAA	CTGTCA	-
vis#MA0252.1	-5	0.0171925	8.18363	1	6	GGGCGCTGTCCATGGTGCTGAA	CTGTCA	-
Pax4#MA0068.1	0	0.0175744	8.3654	1	22	GGGCGCTGTCCATGGTGCTGAA	GGGGGGGGAGTGGAGTATTGGAAATTTTTC	-