NonredundantMotifs:122

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant122
• db :SWISSREGULON
• Id :EWSR1-FLI1.p2
• name :EWSR1-FLI1
• score :0.050506215753953636
  
• External refs:

EntrezGene:2130
UniProt:2130

EntrezGene:2313
UniProt:2313

• Internal refs:

EntrezGene:2130

EntrezGene:2313

Motif matrix
PO A C G T 1 0 0 105 0 2 2 0 103 0 3 104 0 1 0 4 104 0 1 0 5 1 0 104 0 6 2 0 102 1 7 103 0 2 0 8 102 0 3 0 9 0 0 104 1 10 0 2 103 0 11 99 4 2 0 12 105 0 0 0 13 0 0 105 0 14 0 2 103 0 15 100 3 0 2 16 102 0 2 1 17 5 0 97 3 18 3 3 97 2