NonredundantMotifs:13

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant13
• db :HOMER
• Id :STAT1_HelaS3-STAT1-ChIP-Seq
• name  :
• score :0.14724825034947067
  
• External refs:

EntrezGene:6772
UniProt:6772

• Internal refs:

EntrezGene:6772

Motif matrix
PO A C G T 1 1045 1873 1726 1227 2 2413 957 1339 1162 3 904 1327 634 3006 4 6 6 6 5853 5 6 6 6 5853 6 816 4943 6 106 7 70 4192 6 1603 8 1820 1092 1115 1844 9 1568 6 4162 135 10 141 6 4926 798 11 5853 6 6 6 12 5853 6 6 6 13 2983 634 1362 892 14 1121 1303 1016 2431