NonredundantMotifs:184

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant184
• db :HOCOMOCO
• Id :PTF1A_f1
• name  :
• score :0.30416999849236315
  
• External refs:

EntrezGene:256297
UniProt:256297

• Internal refs:

EntrezGene:256297

Motif matrix

P0 A C G T 1 2.0918367346938798 4.642857142857141 1.1734693877551 2.0918367346938798 2 4.3877551020408205 0.0 3.7755102040816304 1.83673469387755 3 1.83673469387755 1.02040816326531 7.1428571428571495 0.0 4 0.0 1.83673469387755 8.163265306122451 0.0 5 5.6122448979591795 0.0 4.3877551020408205 0.0 6 7.1428571428571495 1.02040816326531 1.83673469387755 0.0 7 8.979591836734691 0.0 0.0 1.02040816326531 8 2.6530612244898 3.6734693877551 1.7346938775510201 1.93877551020408 9 3.6734693877551 1.7346938775510201 0.918367346938776 3.6734693877551 10 0.918367346938776 3.57142857142857 4.48979591836735 1.02040816326531 11 4.59183673469388 2.7551020408163303 0.918367346938776 1.7346938775510201 12 6.3265306122449 1.93877551020408 1.7346938775510201 0.0 13 1.02040816326531 8.979591836734691 0.0 0.0 14 8.163265306122451 0.0 0.0 1.83673469387755 15 0.0 2.7551020408163303 5.510204081632651 1.7346938775510201 16 1.93877551020408 5.30612244897959 2.7551020408163303 0.0 17 1.83673469387755 0.0 0.0 8.163265306122451 18 0.0 0.0 10.0 0.0 19 1.7346938775510201 3.6734693877551 0.0 4.59183673469388 20 0.0 5.20408163265306 4.79591836734694 0.0 21 2.5255102040816304 5.280612244897959 0.688775510204082 1.5051020408163298