NonredundantMotifs:3

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant3
• db :HOCOMOCO
• Id :HIF1A_si
• name  :
• score :0.627881956384904
  
• External refs:

EntrezGene:3091
UniProt:3091

• Internal refs:

EntrezGene:3091

Motif matrix

P0 A C G T 1 49.35073723170061 150.7683740892913 253.09512650745353 45.702811667594396 2 55.39665095234532 177.5259004806322 173.39542471041662 92.59907335264587 3 67.5527924307494 181.64982064577737 232.70337908917296 17.011057330340236 4 37.03304980879144 99.20871780863575 107.466564738888 255.20871713972505 5 423.9836515158341 0.514682110703455 72.87466953739238 1.5440463321103701 6 0.0 498.40236738533685 0.0 0.514682110703455 7 0.0 1.02936422140691 497.3730031639301 0.514682110703455 8 0.0 0.0 0.0 498.91704949604 9 0.0 0.0 498.91704949604 0.0 10 103.88964770479032 294.76191451619604 51.77168729100009 48.493799984054206 11 67.98080621865238 131.67867617287078 232.34384398606207 66.91372311845431 12 31.222632805291347 153.94855506020525 195.21194695602236 118.53391467452127