NonredundantMotifs:96

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant96
• db :JASPAR
• Id :MA0068.1
• name :Pax4
• score :0.15303533036622993
  
• External refs:

EntrezGene:5078
UniProt:5078

• Internal refs:

EntrezGene:5078

Motif matrix
P0 A C G T 1 7 2 11 1 2 20 0 1 0 3 16 2 1 2 4 11 1 1 8 5 13 1 3 4 6 11 3 1 6 7 6 1 2 12 8 9 1 1 10 9 5 3 6 7 10 5 11 1 4 11 6 11 4 0 12 7 7 5 2 13 8 7 2 4 14 6 5 1 9 15 10 5 4 2 16 4 8 4 5 17 3 6 4 8 18 7 8 3 3 19 4 9 3 5 20 9 6 2 4 21 5 7 5 4 22 5 6 2 8 23 7 11 0 3 24 6 9 1 5 25 3 12 2 4 26 7 9 2 3 27 3 12 2 4 28 1 11 3 6 29 6 11 1 3 30 3 13 2 3