UBERON:0000982
From FANTOM5_SSTAR
| Name: | skeletal joint | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Anatomical cluster that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO]." [VSAO:0000101, Wikipedia:Joint] | ||
| Xrefs: |
| ||
| Synonyms: |
"articular joint" RELATED [BTO:0001686] "articulation" BROAD [VSAO:0000101] "joint" BROAD [FMA:7490, VSAO:0000101] | ||
| Alt_id: | UBERON:FBbt_00004645-FMA_228659-FMA_7490-MA_0000319-MIAA_0000188-XAO_0000171-ZFA_0001596 | ||
| Subset: |
organ_slim uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004905(articulation) |
|---|---|
| disjoint_from: | UBERON:0001474(bone element) |
| union_of: | UBERON:0002217(synovial joint),UBERON:0011134(nonsynovial joint) |
| part_of: | UBERON:0004770(articular system) |
Children
| is a: | UBERON:0002217 (synovial joint),UBERON:0003657 (limb joint),UBERON:0011134 (nonsynovial joint) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10267-104D6
- 10295-104G7 (cruciate ligament, donor2)
- 10323-105A8
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11252-116F1 (Nucleus Pulposus Cell, donor1)
- 11291-117A4 (Synoviocyte, donor1)
- 11368-117I9 (Synoviocyte, donor2)
- 11409-118E5 (Nucleus Pulposus Cell, donor2)
- 11440-118H9 (Synoviocyte, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000982 (skeletal joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.05e-102 | FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_b1ecf261b483c6257460cdb5e61692be | p@chr3:174737010..174737023, + |
| 5.05e-102 | FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_b1ecf261b483c6257460cdb5e61692be | p@chr3:174737010..174737023, + |
| 6.68e-88 | FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_954cbe2f4583cab6ca97335e6355beb5 | p4@PAX1 |
| 6.68e-88 | FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_954cbe2f4583cab6ca97335e6355beb5 | p4@PAX1 |
| 5.7e-81 | FFCP PHASE2:Hg19::chr2:242004292..242004308,+#_3a6d6fd927550657ed2cf47799211a0f | p15@SNED1 |
| 5.7e-81 | FFCP PHASE1:Hg19::chr2:242004292..242004308,+#_3a6d6fd927550657ed2cf47799211a0f | p15@SNED1 |
| 3.87e-62 | FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_16b8648578283daf3e4c9dda5487b9ad | p@chr5:30104176..30104187, - |
| 3.87e-62 | FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_16b8648578283daf3e4c9dda5487b9ad | p@chr5:30104176..30104187, - |
| 5.39e-52 | FFCP PHASE2:Hg19::chr21:39705383..39705394,-#_27390d93e0ae3513d383cfc7c3e635a8 | p1@ENST00000436845 |
| 5.39e-52 | FFCP PHASE1:Hg19::chr21:39705383..39705394,-#_27390d93e0ae3513d383cfc7c3e635a8 | p1@ENST00000436845 |
| 5.25e-50 | FFCP PHASE2:Hg19::chr14:61190754..61190776,-#_a064797364a574ba49f27ccf254ba349 | p6@SIX4 |
| 5.25e-50 | FFCP PHASE1:Hg19::chr14:61190754..61190776,-#_a064797364a574ba49f27ccf254ba349 | p6@SIX4 |
| 1.71e-49 | FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_66eadedaa2566d6970c24e73df81bb8c | p4@NKX3-2 |
| 1.71e-49 | FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_66eadedaa2566d6970c24e73df81bb8c | p4@NKX3-2 |
| 4.01e-47 | FFCP PHASE2:Hg19::chr5:140887761..140887777,+#_6fcebd35458a11de934ecb03fbb75672 | p@chr5:140887761..140887777, + |
| 4.01e-47 | FFCP PHASE1:Hg19::chr5:140887761..140887777,+#_6fcebd35458a11de934ecb03fbb75672 | p@chr5:140887761..140887777, + |
| 3.73e-45 | FFCP PHASE1:Hg19::chr2:242009429..242009432,+#_3ae92f11804214545e7d59030247fed4 | p@chr2:242009429..242009432, + |
| 3.73e-45 | FFCP PHASE2:Hg19::chr2:242009429..242009432,+#_3ae92f11804214545e7d59030247fed4 | p@chr2:242009429..242009432, + |
| 5.04e-45 | FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_b3e0fd9188c1f214584e0fa4f1c7a0a1 | p@chr9:114135497..114135526, - |
| 5.04e-45 | FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_b3e0fd9188c1f214584e0fa4f1c7a0a1 | p@chr9:114135497..114135526, - |
| 1.45e-44 | FFCP PHASE1:Hg19::chr2:241897125..241897142,-#_510fcef1366d329167042ac2d30aa366 | p@chr2:241897125..241897142, - |
| 1.45e-44 | FFCP PHASE2:Hg19::chr2:241897125..241897142,-#_510fcef1366d329167042ac2d30aa366 | p@chr2:241897125..241897142, - |
| 5.55e-44 | FFCP PHASE1:Hg19::chr3:80727046..80727051,-#_7cb74435875f0979b11e68c1e10189b0 | p@chr3:80727046..80727051, - |
| 5.55e-44 | FFCP PHASE2:Hg19::chr3:80727046..80727051,-#_7cb74435875f0979b11e68c1e10189b0 | p@chr3:80727046..80727051, - |
| 5.66e-42 | FFCP PHASE1:Hg19::chr7:100202784..100202796,-#_701720b73d744b2d3f0853e554fb5754 | p@chr7:100202784..100202796, - |
| 5.66e-42 | FFCP PHASE2:Hg19::chr7:100202784..100202796,-#_701720b73d744b2d3f0853e554fb5754 | p@chr7:100202784..100202796, - |
| 9.63e-42 | FFCP PHASE1:Hg19::chr1:19811132..19811155,-#_3482ce59ea7e0ef30e61dd09f0c58cbd | p20@CAPZB |
| 9.63e-42 | FFCP PHASE2:Hg19::chr1:19811132..19811155,-#_3482ce59ea7e0ef30e61dd09f0c58cbd | p20@CAPZB |
| 2.13e-39 | FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_57a4c69b200305e1cd70b23f2ad439bc | p@chr1:19778678..19778689, - |
| 2.13e-39 | FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_57a4c69b200305e1cd70b23f2ad439bc | p@chr1:19778678..19778689, - |
| 1.04e-37 | FFCP PHASE1:Hg19::chr2:241897189..241897221,-#_47c9a74722964c8683496907625bdacf | p@chr2:241897189..241897221, - |
| 1.04e-37 | FFCP PHASE2:Hg19::chr2:241897189..241897221,-#_47c9a74722964c8683496907625bdacf | p@chr2:241897189..241897221, - |
| 1.51e-37 | FFCP PHASE1:Hg19::chr2:241987807..241987808,+#_8475d26d970679fc109de4870a5a58d4 | p22@SNED1 |
| 1.51e-37 | FFCP PHASE2:Hg19::chr2:241987807..241987808,+#_8475d26d970679fc109de4870a5a58d4 | p22@SNED1 |
| 3.4e-36 | FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_bd256bfad7ee90cc9618e352df4555c5 | p1@uc010aki.1 |
| 3.4e-36 | FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_bd256bfad7ee90cc9618e352df4555c5 | p1@uc010aki.1 |
| 6.5e-34 | FFCP PHASE2:Hg19::chr7:80546293..80546302,-#_7ec5d95a9316539fcea2f0e6ed75681e | p31@SEMA3C |
| 6.5e-34 | FFCP PHASE1:Hg19::chr7:80546293..80546302,-#_7ec5d95a9316539fcea2f0e6ed75681e | p31@SEMA3C |
| 9.08e-34 | FFCP PHASE2:Hg19::chr14:23574164..23574179,-#_ef35dd31c71fd7b20f2a46f5220264d5 | p3@uc010aki.1 |
| 9.08e-34 | FFCP PHASE1:Hg19::chr14:23574164..23574179,-#_ef35dd31c71fd7b20f2a46f5220264d5 | p3@uc010aki.1 |
| 1.15e-32 | FFCP PHASE1:Hg19::chr20:21687260..21687270,+#_c6717be6bc0c3c41cc425ef5433c083c | p3@PAX1 |
| 1.15e-32 | FFCP PHASE2:Hg19::chr20:21687260..21687270,+#_c6717be6bc0c3c41cc425ef5433c083c | p3@PAX1 |
| 1.77e-32 | FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_b3319de5309e55dbba91e36b0a8b25da | p@chr10:81923378..81923389, - |
| 1.77e-32 | FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_b3319de5309e55dbba91e36b0a8b25da | p@chr10:81923378..81923389, - |
| 2.19e-32 | FFCP PHASE2:Hg19::chr2:12248310..12248334,-#_dfd994c339fe899a84aa61e00d6fbcdb | p@chr2:12248310..12248334, - |
| 2.19e-32 | FFCP PHASE1:Hg19::chr2:12248310..12248334,-#_dfd994c339fe899a84aa61e00d6fbcdb | p@chr2:12248310..12248334, - |
| 8.44e-32 | FFCP PHASE1:Hg19::chr7:18832913..18832946,+#_97d0f3b2af38cf04b5a1669d02f67564 | p19@HDAC9 |
| 8.44e-32 | FFCP PHASE2:Hg19::chr7:18832913..18832946,+#_97d0f3b2af38cf04b5a1669d02f67564 | p19@HDAC9 |
| 3.34e-31 | FFCP PHASE1:Hg19::chr20:43343610..43343645,+#_95a7e7bab68d711268570331b1700d7e | p5@WISP2 |
| 3.34e-31 | FFCP PHASE2:Hg19::chr20:43343610..43343645,+#_95a7e7bab68d711268570331b1700d7e | p5@WISP2 |
| 1.1e-30 | FFCP PHASE2:Hg19::chr7:158224707..158224729,-#_25a00504750ff441e16444a290823341 | p@chr7:158224707..158224729, - |
| 1.1e-30 | FFCP PHASE1:Hg19::chr7:158224707..158224729,-#_25a00504750ff441e16444a290823341 | p@chr7:158224707..158224729, - |
| 4.93e-30 | FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_1c45ffec85a00cf30068ae796e5559c0 | p@chr1:65888177..65888194, + |
| 4.93e-30 | FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_1c45ffec85a00cf30068ae796e5559c0 | p@chr1:65888177..65888194, + |
| 1.3e-29 | FFCP PHASE1:Hg19::chr2:241937787..241937803,+#_4ba210b1c2eb552e30ea71cd43d4c366 | p5@SNED1 |
| 1.3e-29 | FFCP PHASE2:Hg19::chr2:241937787..241937803,+#_4ba210b1c2eb552e30ea71cd43d4c366 | p5@SNED1 |
| 6.39e-29 | FFCP PHASE1:Hg19::chr17:38613285..38613298,-#_ccb8b1d4b4efe981a8712c45fab8da08 | p@chr17:38613285..38613298, - |
| 6.39e-29 | FFCP PHASE2:Hg19::chr17:38613285..38613298,-#_ccb8b1d4b4efe981a8712c45fab8da08 | p@chr17:38613285..38613298, - |
| 6.71e-29 | FFCP PHASE1:Hg19::chr9:113798560..113798572,-#_d2d124841fc83868f8ec5cd24a2c660e | p34@LPAR1 |
| 6.71e-29 | FFCP PHASE2:Hg19::chr9:113798560..113798572,-#_d2d124841fc83868f8ec5cd24a2c660e | p34@LPAR1 |
| 1.23e-28 | FFCP PHASE1:Hg19::chr4:13546583..13546593,-#_5c8403bef8ac1b1d7b095c65a1097c95 | p3@NKX3-2 |
| 1.23e-28 | FFCP PHASE2:Hg19::chr4:13546583..13546593,-#_5c8403bef8ac1b1d7b095c65a1097c95 | p3@NKX3-2 |
| 1.72e-28 | FFCP PHASE1:Hg19::chr20:43343596..43343608,+#_9755f19284a873f84fa37a6b47130880 | p6@WISP2 |
| 1.72e-28 | FFCP PHASE2:Hg19::chr20:43343596..43343608,+#_9755f19284a873f84fa37a6b47130880 | p6@WISP2 |
| 1.13e-27 | FFCP PHASE1:Hg19::chr1:78695274..78695292,+#_1b3082048b573a26dcd0d7ab0b091227 | p1@MGC27382 |
| 1.13e-27 | FFCP PHASE2:Hg19::chr1:78695274..78695292,+#_1b3082048b573a26dcd0d7ab0b091227 | p1@MGC27382 |
| 3.37e-27 | FFCP PHASE1:Hg19::chr7:18832834..18832859,+#_fa9b7b64171dcec5b717d3de4e352bcd | p18@HDAC9 |
| 3.37e-27 | FFCP PHASE2:Hg19::chr7:18832834..18832859,+#_fa9b7b64171dcec5b717d3de4e352bcd | p18@HDAC9 |
| 9.5e-27 | FFCP PHASE1:Hg19::chr8:25337491..25337504,+#_d0b54eb3c8ed6142b2a46aa604db10a2 | p@chr8:25337491..25337504, + |
| 9.5e-27 | FFCP PHASE2:Hg19::chr8:25337491..25337504,+#_d0b54eb3c8ed6142b2a46aa604db10a2 | p@chr8:25337491..25337504, + |
| 2.17e-26 | FFCP PHASE2:Hg19::chr14:61113228..61113233,-#_e47e486b3e6360ee7e09add98eab25df | p@chr14:61113228..61113233, - |
| 2.17e-26 | FFCP PHASE1:Hg19::chr14:61113228..61113233,-#_e47e486b3e6360ee7e09add98eab25df | p@chr14:61113228..61113233, - |
| 5.22e-26 | FFCP PHASE1:Hg19::chr1:172134736..172134739,+#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr1:172134736..172134739, + |
| 5.22e-26 | FFCP PHASE1:Hg19::chr13:24914614..24914622,-#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr13:24914614..24914622, - |
| 5.22e-26 | FFCP PHASE2:Hg19::chr12:130786785..130786827,-#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr12:130786785..130786827, - |
| 5.22e-26 | FFCP PHASE2:Hg19::chr1:172134736..172134739,+#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr1:172134736..172134739, + |
| 5.22e-26 | FFCP PHASE1:Hg19::chr1:172134755..172134764,+#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr1:172134755..172134764, + |
| 5.22e-26 | FFCP PHASE1:Hg19::chr9:33028063..33028067,-#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr9:33028063..33028067, - |
| 5.22e-26 | FFCP PHASE1:Hg19::chr15:68117826..68117829,+#_ecbc0d75eaf45575b2714e00d4874f7a | p9@SKOR1 |
| 5.22e-26 | FFCP PHASE1:Hg19::chr2:181751144..181751146,+#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr2:181751144..181751146, + |
| 5.22e-26 | FFCP PHASE2:Hg19::chr1:172134755..172134764,+#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr1:172134755..172134764, + |
| 5.22e-26 | FFCP PHASE2:Hg19::chr13:24914614..24914622,-#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr13:24914614..24914622, - |
| 5.22e-26 | FFCP PHASE1:Hg19::chr8:37411632..37411639,-#_ecbc0d75eaf45575b2714e00d4874f7a | p1@ENST00000517363 |
| 5.22e-26 | FFCP PHASE2:Hg19::chr15:68117826..68117829,+#_ecbc0d75eaf45575b2714e00d4874f7a | p9@SKOR1 |
| 5.22e-26 | FFCP PHASE2:Hg19::chr2:181751144..181751146,+#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr2:181751144..181751146, + |
| 5.22e-26 | FFCP PHASE2:Hg19::chr9:33028063..33028067,-#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr9:33028063..33028067, - |
| 5.22e-26 | FFCP PHASE2:Hg19::chr8:37411632..37411639,-#_ecbc0d75eaf45575b2714e00d4874f7a | p1@ENST00000517363 |
| 5.22e-26 | FFCP PHASE1:Hg19::chr1:172134667..172134711,+#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr1:172134667..172134711, + |
| 5.22e-26 | FFCP PHASE1:Hg19::chr12:130786785..130786827,-#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr12:130786785..130786827, - |
| 5.22e-26 | FFCP PHASE2:Hg19::chr1:172134667..172134711,+#_ecbc0d75eaf45575b2714e00d4874f7a | p@chr1:172134667..172134711, + |
| 8.65e-26 | FFCP PHASE2:Hg19::chr18:22150956..22150983,+#_1198995c9191029adea2359747dc2cbc | p@chr18:22150956..22150983, + |
| 8.65e-26 | FFCP PHASE2:Hg19::chr1:78769549..78769554,+#_1198995c9191029adea2359747dc2cbc | p5@PTGFR |
| 8.65e-26 | FFCP PHASE1:Hg19::chr18:22150956..22150983,+#_1198995c9191029adea2359747dc2cbc | p@chr18:22150956..22150983, + |
| 8.65e-26 | FFCP PHASE1:Hg19::chr1:78769549..78769554,+#_1198995c9191029adea2359747dc2cbc | p5@PTGFR |
| 9.05e-26 | FFCP PHASE1:Hg19::chr6:1626414..1626429,-#_13fee1f9cf825426ff98a937d49d53fd | p7@GMDS |
| 9.05e-26 | FFCP PHASE2:Hg19::chr6:1626414..1626429,-#_13fee1f9cf825426ff98a937d49d53fd | p7@GMDS |
| 1.44e-25 | FFCP PHASE1:Hg19::chr9:113798435..113798442,-#_8aef5617c783673d961017fc8baebdfe | p42@LPAR1 |
| 1.44e-25 | FFCP PHASE2:Hg19::chr9:113798435..113798442,-#_8aef5617c783673d961017fc8baebdfe | p42@LPAR1 |
| 1.56e-25 | FFCP PHASE1:Hg19::chr5:17743903..17743914,+#_74496285239d2ae33f689d48d05eea00 | p@chr5:17743903..17743914, + |
| 1.56e-25 | FFCP PHASE2:Hg19::chr5:17743903..17743914,+#_74496285239d2ae33f689d48d05eea00 | p@chr5:17743903..17743914, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster that consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster which consists of two or more adjacent bones or cartilages, which may be interconnected by various types of tissue.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
