UBERON:0002079

Name:	left cardiac atrium
Namespace:	FANTOM
Definition:	"Left cardiac chamber which is continuous with the pulmonary venous trunk.[FMA]" [FMA:FMA, Wikipedia:Left_atrium]
Xrefs:	Expandlinks: AAO:0010247 BTO:0001702 EHDAA2:0000275 EMAPA:17315 FMA:7097 galen:LeftAtrium [1] [ 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png] MA:0000074 ncithesaurus:Left_Atrium OpenCyc:Mx4rkJN1AagEEdudWQACs5b6Bw OpenCyc:Mx8Ngh4rvgIFoJwpEbGdrcN5Y29ycB4rDJ89oqgPEdudWQACs5b6Bw SCTID:244387002 VHOG:0000369 XAO:0003191
Synonyms:	"atrium sinistrum" RELATED LATIN [Wikipedia:Left_atrium] "cardiac left atrium" EXACT [] "heart left atrium" EXACT [] "left atrium of heart" EXACT [] "left cardiac atrium" EXACT []
Comments:	This class was created automatically from a combination of ontologies
Alt_id:	UBERON:FMA_7097-MA_0000074
Subset:	uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	UBERON:0002081(cardiac atrium),UBERON:0015212(lateral structure)

Children

derives from:	FF:0010079 (human left atrium - adult sample)
part of:	UBERON:0005966 (outflow part of left atrium)

Ontology Tree: Loaded from BioPortal

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FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

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Human (Homo sapiens)

• 10079-102A7 (left atrium, adult, donor1)

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002079 (left cardiac atrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
5.42e-195	FFCP PHASE2:Hg19::chr17:79385898..79385905,-	p@chr17:79385898..79385905, -
5.42e-195	FFCP PHASE1:Hg19::chr17:79385898..79385905,-	p@chr17:79385898..79385905, -
5.42e-195	FFCP PHASE1:Hg19::chr1:11907474..11907481,-	p10@NPPA
5.42e-195	FFCP PHASE2:Hg19::chr1:43676416..43676417,-	p@chr1:43676416..43676417, -
5.42e-195	FFCP PHASE1:Hg19::chr1:43676416..43676417,-	p@chr1:43676416..43676417, -
5.42e-195	FFCP PHASE2:Hg19::chr1:11907474..11907481,-	p10@NPPA
9.37e-99	FFCP PHASE2:Hg19::chr1:11906044..11906050,-	p@chr1:11906044..11906050, -
9.37e-99	FFCP PHASE1:Hg19::chr15:26640282..26640290,+	p5@ENST00000451579
9.37e-99	FFCP PHASE2:Hg19::chr1:11907415..11907418,-	p15@NPPA
9.37e-99	FFCP PHASE1:Hg19::chr1:11907408..11907415,+	p@chr1:11907408..11907415, +
9.37e-99	FFCP PHASE2:Hg19::chr15:26640258..26640266,+	p4@ENST00000451579
9.37e-99	FFCP PHASE1:Hg19::chr1:11906044..11906050,-	p@chr1:11906044..11906050, -
9.37e-99	FFCP PHASE2:Hg19::chr1:11907440..11907450,+	p@chr1:11907440..11907450, +
9.37e-99	FFCP PHASE1:Hg19::chr1:11907415..11907418,-	p15@NPPA
9.37e-99	FFCP PHASE1:Hg19::chr12:94730118..94730123,-	p13@CCDC41
9.37e-99	FFCP PHASE2:Hg19::chr1:11907318..11907327,-	p7@NPPA
9.37e-99	FFCP PHASE2:Hg19::chr15:26640282..26640290,+	p5@ENST00000451579
9.37e-99	FFCP PHASE2:Hg19::chr1:109849679..109849688,-	p3@MYBPHL
9.37e-99	FFCP PHASE1:Hg19::chr12:70004523..70004545,-	p3@LRRC10
9.37e-99	FFCP PHASE1:Hg19::chr1:11907440..11907450,+	p@chr1:11907440..11907450, +
9.37e-99	FFCP PHASE2:Hg19::chr4:8321842..8321846,+	p5@ENST00000509453
9.37e-99	FFCP PHASE1:Hg19::chr1:11907318..11907327,-	p7@NPPA
9.37e-99	FFCP PHASE1:Hg19::chr1:109849679..109849688,-	p3@MYBPHL
9.37e-99	FFCP PHASE2:Hg19::chr12:94730118..94730123,-	p13@CCDC41
9.37e-99	FFCP PHASE2:Hg19::chr12:70004523..70004545,-	p3@LRRC10
9.37e-99	FFCP PHASE1:Hg19::chr15:26640258..26640266,+	p4@ENST00000451579
9.37e-99	FFCP PHASE2:Hg19::chr1:11907408..11907415,+	p@chr1:11907408..11907415, +
9.37e-99	FFCP PHASE1:Hg19::chr4:8321842..8321846,+	p5@ENST00000509453
2.55e-98	FFCP PHASE2:Hg19::chr8:142431453..142431493,+	p@chr8:142431453..142431493, +
2.55e-98	FFCP PHASE1:Hg19::chr11:45274072..45274078,-	p@chr11:45274072..45274078, -
2.55e-98	FFCP PHASE2:Hg19::chr1:207996071..207996074,-	p5@C1orf132
2.55e-98	FFCP PHASE1:Hg19::chr2:50059270..50059276,-	p@chr2:50059270..50059276, -
2.55e-98	FFCP PHASE2:Hg19::chr6:138423239..138423250,-	p@chr6:138423239..138423250, -
2.55e-98	FFCP PHASE1:Hg19::chr8:142431453..142431493,+	p@chr8:142431453..142431493, +
2.55e-98	FFCP PHASE1:Hg19::chr11:45274102..45274110,-	p@chr11:45274102..45274110, -
2.55e-98	FFCP PHASE1:Hg19::chr1:207996071..207996074,-	p5@C1orf132
2.55e-98	FFCP PHASE1:Hg19::chr14:23862118..23862122,-	p18@MYH6
2.55e-98	FFCP PHASE1:Hg19::chr6:138423239..138423250,-	p@chr6:138423239..138423250, -
2.55e-98	FFCP PHASE2:Hg19::chr11:45274072..45274078,-	p@chr11:45274072..45274078, -
2.55e-98	FFCP PHASE2:Hg19::chr11:45274102..45274110,-	p@chr11:45274102..45274110, -
2.55e-98	FFCP PHASE2:Hg19::chr14:23862118..23862122,-	p18@MYH6
2.55e-98	FFCP PHASE2:Hg19::chr18:28807557..28807562,-	p@chr18:28807557..28807562, -
2.55e-98	FFCP PHASE1:Hg19::chr18:28807557..28807562,-	p@chr18:28807557..28807562, -
2.55e-98	FFCP PHASE2:Hg19::chr2:50059270..50059276,-	p@chr2:50059270..50059276, -
1.23e-66	FFCP PHASE1:Hg19::chr18:21906552..21906584,+	p@chr18:21906552..21906584, +
1.23e-66	FFCP PHASE2:Hg19::chr7:145378479..145378484,-	p1@ENST00000422084
1.23e-66	FFCP PHASE2:Hg19::chr15:77964143..77964150,-	p@chr15:77964143..77964150, -
1.23e-66	FFCP PHASE2:Hg19::chr12:70004575..70004590,-	p4@LRRC10
1.23e-66	FFCP PHASE2:Hg19::chr14:23863078..23863082,+	p@chr14:23863078..23863082, +
1.23e-66	FFCP PHASE1:Hg19::chr4:65366184..65366190,-	p@chr4:65366184..65366190, -
1.23e-66	FFCP PHASE1:Hg19::chr14:104315251..104315260,-	p@chr14:104315251..104315260, -
1.23e-66	FFCP PHASE2:Hg19::chr1:11905799..11905806,-	p@chr1:11905799..11905806, -
1.23e-66	FFCP PHASE1:Hg19::chr7:145378479..145378484,-	p1@ENST00000422084
1.23e-66	FFCP PHASE2:Hg19::chr1:11907265..11907271,-	p9@NPPA
1.23e-66	FFCP PHASE2:Hg19::chr15:44172096..44172101,-	p@chr15:44172096..44172101, -
1.23e-66	FFCP PHASE1:Hg19::chr12:114886422..114886429,-	p@chr12:114886422..114886429, -
1.23e-66	FFCP PHASE1:Hg19::chr1:11905799..11905806,-	p@chr1:11905799..11905806, -
1.23e-66	FFCP PHASE1:Hg19::chr15:26640223..26640233,+	p2@ENST00000451579
1.23e-66	FFCP PHASE1:Hg19::chr14:23863067..23863074,+	p@chr14:23863067..23863074, +
1.23e-66	FFCP PHASE1:Hg19::chr1:11907265..11907271,-	p9@NPPA
1.23e-66	FFCP PHASE2:Hg19::chr14:104315251..104315260,-	p@chr14:104315251..104315260, -
1.23e-66	FFCP PHASE2:Hg19::chr1:11905915..11905921,-	p@chr1:11905915..11905921, -
1.23e-66	FFCP PHASE2:Hg19::chr2:69098566..69098571,-	p3@BMP10
1.23e-66	FFCP PHASE2:Hg19::chr5:172671810..172671816,-	p@chr5:172671810..172671816, -
1.23e-66	FFCP PHASE2:Hg19::chr12:114886422..114886429,-	p@chr12:114886422..114886429, -
1.23e-66	FFCP PHASE1:Hg19::chr15:77964143..77964150,-	p@chr15:77964143..77964150, -
1.23e-66	FFCP PHASE1:Hg19::chr14:23863078..23863082,+	p@chr14:23863078..23863082, +
1.23e-66	FFCP PHASE2:Hg19::chr4:65366184..65366190,-	p@chr4:65366184..65366190, -
1.23e-66	FFCP PHASE2:Hg19::chr1:11907395..11907410,-	p4@NPPA
1.23e-66	FFCP PHASE2:Hg19::chr18:21906552..21906584,+	p@chr18:21906552..21906584, +
1.23e-66	FFCP PHASE1:Hg19::chr12:70004575..70004590,-	p4@LRRC10
1.23e-66	FFCP PHASE2:Hg19::chr15:26640223..26640233,+	p2@ENST00000451579
1.23e-66	FFCP PHASE1:Hg19::chr1:11905915..11905921,-	p@chr1:11905915..11905921, -
1.23e-66	FFCP PHASE1:Hg19::chr15:44172096..44172101,-	p@chr15:44172096..44172101, -
1.23e-66	FFCP PHASE2:Hg19::chr14:23863067..23863074,+	p@chr14:23863067..23863074, +
1.23e-66	FFCP PHASE1:Hg19::chr2:69098566..69098571,-	p3@BMP10
1.23e-66	FFCP PHASE1:Hg19::chr5:172671810..172671816,-	p@chr5:172671810..172671816, -
1.23e-66	FFCP PHASE1:Hg19::chr1:11907395..11907410,-	p4@NPPA
2.39e-66	FFCP PHASE1:Hg19::chr3:119379472..119379475,-	p6@POPDC2
2.39e-66	FFCP PHASE2:Hg19::chr15:99383378..99383380,-	p@chr15:99383378..99383380, -
2.39e-66	FFCP PHASE1:Hg19::chr12:94073515..94073534,+	p@chr12:94073515..94073534, +
2.39e-66	FFCP PHASE1:Hg19::chr12:117491808..117491811,-	p6@TESC
2.39e-66	FFCP PHASE2:Hg19::chr12:3157390..3157430,+	p@chr12:3157390..3157430, +
2.39e-66	FFCP PHASE1:Hg19::chr10:97182338..97182349,-	p@chr10:97182338..97182349, -
2.39e-66	FFCP PHASE1:Hg19::chr1:78383264..78383274,+	p31@NEXN
2.39e-66	FFCP PHASE1:Hg19::chr6:3912296..3912301,-	p4@BX647262
2.39e-66	FFCP PHASE1:Hg19::chr2:220492830..220492865,+	p16@SLC4A3
2.39e-66	FFCP PHASE1:Hg19::chr11:19231405..19231414,+	p@chr11:19231405..19231414, +
2.39e-66	FFCP PHASE2:Hg19::chr5:160729887..160729898,+	p@chr5:160729887..160729898, +
2.39e-66	FFCP PHASE2:Hg19::chr12:117491808..117491811,-	p6@TESC
2.39e-66	FFCP PHASE2:Hg19::chr20:55732283..55732288,-	p@chr20:55732283..55732288, -
2.39e-66	FFCP PHASE2:Hg19::chr2:101728712..101728734,+	p@chr2:101728712..101728734, +
2.39e-66	FFCP PHASE2:Hg19::chr12:94073515..94073534,+	p@chr12:94073515..94073534, +
2.39e-66	FFCP PHASE1:Hg19::chr5:160729887..160729898,+	p@chr5:160729887..160729898, +
2.39e-66	FFCP PHASE2:Hg19::chr10:97182338..97182349,-	p@chr10:97182338..97182349, -
2.39e-66	FFCP PHASE1:Hg19::chr20:55732283..55732288,-	p@chr20:55732283..55732288, -
2.39e-66	FFCP PHASE1:Hg19::chr2:101728712..101728734,+	p@chr2:101728712..101728734, +
2.39e-66	FFCP PHASE1:Hg19::chr12:114841717..114841726,-	p15@TBX5
2.39e-66	FFCP PHASE2:Hg19::chr11:19231405..19231414,+	p@chr11:19231405..19231414, +
2.39e-66	FFCP PHASE2:Hg19::chr2:163978183..163978189,+	p@chr2:163978183..163978189, +

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