UBERON:0003464
From FANTOM5_SSTAR
| Name: | hindlimb bone | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "A bone that is part of a hindlimb region. Examples: any foot phalanx, femur. Counter-examples: ischium, pubis (they are part of the pelvic girdle)" [UBERON:cjm] | |
| Xrefs: |
| |
| Synonyms: |
"bone of hind limb" EXACT [OBOL:automatic] "bone of hindlimb" EXACT [OBOL:automatic] "bone of inferior member" EXACT [OBOL:automatic] "bone of lower extremity" EXACT [OBOL:automatic] "bone organ of hind limb" EXACT [OBOL:automatic] "bone organ of hindlimb" EXACT [OBOL:automatic] "bone organ of inferior member" EXACT [OBOL:automatic] "bone organ of lower extremity" EXACT [OBOL:automatic] "hind limb bone" EXACT [OBOL:automatic] "hind limb bone organ" EXACT [OBOL:automatic] "hindlimb bone organ" EXACT [OBOL:automatic] "inferior member bone" EXACT [OBOL:automatic] "inferior member bone organ" EXACT [OBOL:automatic] "lower extremity bone" EXACT [OBOL:automatic] "lower extremity bone organ" EXACT [OBOL:automatic] | |
| Comments: | Note that the MA class is actually bone of pelvic complex; in contrast the NCIT class excludes ilium etc |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002428(limb bone),UBERON:0010742(bone of pelvic complex),UBERON:0015022(hindlimb endochondral element) |
|---|---|
| develops_from: | UBERON:0010885(hindlimb cartilage element) |
| part_of: | UBERON:0002103(hindlimb),UBERON:0001441(hindlimb skeleton),UBERON:0002103(hindlimb) |
Children
| is a: | UBERON:0003608 (hindlimb long bone),UBERON:0005893 (leg bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 1350-25C3 (bone (os femoris), neonate N20)
- 1525-43A6 (bone (os femoris), neonate N16)
- 1985-43F5 (bone (os femoris), neonate N02)
- 56-12G2 (bone (os femoris), adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003464 (hindlimb bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
