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UBERON:0007277

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Name:presumptive hindbrain
Namespace:FANTOM
Xrefs:
links:

EFO:0003440
TAO:0000569

ZFA:0000569

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0006598(presumptive structure)
develops_from:UBERON:0003076(posterior neural tube)
part_of:UBERON:0006238(future brain)



Children

develops from:UBERON:0002028 (hindbrain)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007277 (presumptive hindbrain), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.71e-110FFCP PHASE2:Hg19::chr2:72381655..72381673,-#_68c021991af7067ce93c2f3e81d0a29fp@chr2:72381655..72381673, -
1.71e-110FFCP PHASE1:Hg19::chr2:72381655..72381673,-#_68c021991af7067ce93c2f3e81d0a29fp@chr2:72381655..72381673, -
5.84e-89FFCP PHASE2:Hg19::chr11:20621148..20621166,+#_252f0ef80f50fd74743ee022c61862e5p1@SLC6A5
5.84e-89FFCP PHASE1:Hg19::chr11:20621148..20621166,+#_252f0ef80f50fd74743ee022c61862e5p1@SLC6A5
2.65e-84FFCP PHASE2:Hg19::chr11:122733138..122733178,+#_255d149ee939be3538b87af0e123cdb5p3@CRTAM
2.65e-84FFCP PHASE1:Hg19::chr11:122733138..122733178,+#_255d149ee939be3538b87af0e123cdb5p3@CRTAM
3.05e-84FFCP PHASE2:Hg19::chr9:135457981..135458003,+#_8b7864b35933ba594696c87384b4c007p1@BARHL1
3.05e-84FFCP PHASE1:Hg19::chr9:135457981..135458003,+#_8b7864b35933ba594696c87384b4c007p1@BARHL1
4.43e-82FFCP PHASE1:Hg19::chr6:152884391..152884402,-#_b6930b0f3a58041856b6b2ded15839f8p@chr6:152884391..152884402, -
4.43e-82FFCP PHASE1:Hg19::chr4:117873850..117873861,-#_b6930b0f3a58041856b6b2ded15839f8p@chr4:117873850..117873861, -
4.43e-82FFCP PHASE2:Hg19::chr6:152884391..152884402,-#_b6930b0f3a58041856b6b2ded15839f8p@chr6:152884391..152884402, -
4.43e-82FFCP PHASE2:Hg19::chr4:117873850..117873861,-#_b6930b0f3a58041856b6b2ded15839f8p@chr4:117873850..117873861, -
6.69e-74FFCP PHASE2:Hg19::chr6:152884406..152884453,-#_f94f5933eddb4090785b3ed0549ba33cp@chr6:152884406..152884453, -
6.69e-74FFCP PHASE1:Hg19::chr6:152884406..152884453,-#_f94f5933eddb4090785b3ed0549ba33cp@chr6:152884406..152884453, -
1.11e-73FFCP PHASE2:Hg19::chr13:100311142..100311153,+#_2f83c01b797eeb98f10fdd2e2129127dp@chr13:100311142..100311153, +
1.11e-73FFCP PHASE1:Hg19::chr13:100311142..100311153,+#_2f83c01b797eeb98f10fdd2e2129127dp@chr13:100311142..100311153, +
4.59e-73FFCP PHASE1:Hg19::chr10:130489605..130489614,-#_7ace898e1f96e2cb4740cb632489aacbp@chr10:130489605..130489614, -
4.59e-73FFCP PHASE2:Hg19::chr10:130489605..130489614,-#_7ace898e1f96e2cb4740cb632489aacbp@chr10:130489605..130489614, -
3.5e-70FFCP PHASE1:Hg19::chr9:73736442..73736451,-#_e82cf00b4eeb04842b9a8fed256d7e5bp9@TRPM3
3.5e-70FFCP PHASE2:Hg19::chr9:73736442..73736451,-#_e82cf00b4eeb04842b9a8fed256d7e5bp9@TRPM3
1.26e-68FFCP PHASE1:Hg19::chr11:43855489..43855503,-#_a937bac231da90907b2ce665bf2a0c52p1@ENST00000524643
1.26e-68FFCP PHASE1:Hg19::chr5:161112715..161112736,+#_a937bac231da90907b2ce665bf2a0c52p1@GABRA6
1.26e-68FFCP PHASE2:Hg19::chr11:43855489..43855503,-#_a937bac231da90907b2ce665bf2a0c52p1@ENST00000524643
1.26e-68FFCP PHASE2:Hg19::chr5:161112715..161112736,+#_a937bac231da90907b2ce665bf2a0c52p1@GABRA6
1.26e-68FFCP PHASE2:Hg19::chr3:147110022..147110050,-#_a937bac231da90907b2ce665bf2a0c52p8@ZIC4
1.26e-68FFCP PHASE1:Hg19::chr3:147110022..147110050,-#_a937bac231da90907b2ce665bf2a0c52p8@ZIC4
1.45e-68FFCP PHASE2:Hg19::chr6:72922590..72922605,+#_5d1ca1646482e189b4562729bdb904ccp5@RIMS1
1.45e-68FFCP PHASE1:Hg19::chr6:72922590..72922605,+#_5d1ca1646482e189b4562729bdb904ccp5@RIMS1
1.67e-68FFCP PHASE2:Hg19::chr11:27742115..27742119,-#_cb53461ff11610d7c75c1c7af85ed262p17@BDNF
1.67e-68FFCP PHASE1:Hg19::chr11:27742115..27742119,-#_cb53461ff11610d7c75c1c7af85ed262p17@BDNF
6.16e-67FFCP PHASE2:Hg19::chr19:29493486..29493497,+#_484915dd3afcb085114590442e4e468ep2@LOC100505835
6.16e-67FFCP PHASE1:Hg19::chr19:29493486..29493497,+#_484915dd3afcb085114590442e4e468ep2@LOC100505835
5.11e-66FFCP PHASE1:Hg19::chr5:161112968..161112988,+#_a441d8eedf5a6701a552659d8bd53cc4p3@GABRA6
5.11e-66FFCP PHASE1:Hg19::chr3:98519943..98519958,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr3:98519943..98519958, -
5.11e-66FFCP PHASE1:Hg19::chr1:16366392..16366411,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr1:16366392..16366411, -
5.11e-66FFCP PHASE1:Hg19::chr14:60049016..60049032,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr14:60049016..60049032, -
5.11e-66FFCP PHASE2:Hg19::chr18:8783586..8783597,+#_a441d8eedf5a6701a552659d8bd53cc4p2@CCDC165
5.11e-66FFCP PHASE2:Hg19::chr20:45061746..45061763,-#_a441d8eedf5a6701a552659d8bd53cc4p4@ELMO2
5.11e-66FFCP PHASE1:Hg19::chr6:72922614..72922626,+#_a441d8eedf5a6701a552659d8bd53cc4p19@RIMS1
5.11e-66FFCP PHASE2:Hg19::chr5:161112968..161112988,+#_a441d8eedf5a6701a552659d8bd53cc4p3@GABRA6
5.11e-66FFCP PHASE2:Hg19::chr6:72922728..72922737,+#_a441d8eedf5a6701a552659d8bd53cc4p29@RIMS1
5.11e-66FFCP PHASE2:Hg19::chr20:39790925..39790940,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr20:39790925..39790940, +
5.11e-66FFCP PHASE1:Hg19::chr17:50236110..50236119,-#_a441d8eedf5a6701a552659d8bd53cc4p22@CA10
5.11e-66FFCP PHASE1:Hg19::chr17:588423..588441,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr17:588423..588441, -
5.11e-66FFCP PHASE1:Hg19::chr20:45061746..45061763,-#_a441d8eedf5a6701a552659d8bd53cc4p4@ELMO2
5.11e-66FFCP PHASE2:Hg19::chr2:149835088..149835109,+#_a441d8eedf5a6701a552659d8bd53cc4p9@KIF5C
5.11e-66FFCP PHASE1:Hg19::chr15:81489280..81489292,+#_a441d8eedf5a6701a552659d8bd53cc4p15@IL16
5.11e-66FFCP PHASE1:Hg19::chr17:36720287..36720302,-#_a441d8eedf5a6701a552659d8bd53cc4p18@SRCIN1
5.11e-66FFCP PHASE2:Hg19::chr14:77582905..77582916,+#_a441d8eedf5a6701a552659d8bd53cc4p5@TMEM63C
5.11e-66FFCP PHASE2:Hg19::chr14:52168958..52169000,+#_a441d8eedf5a6701a552659d8bd53cc4p27@FRMD6
5.11e-66FFCP PHASE2:Hg19::chr14:60049016..60049032,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr14:60049016..60049032, -
5.11e-66FFCP PHASE1:Hg19::chr11:122733033..122733052,+#_a441d8eedf5a6701a552659d8bd53cc4p4@CRTAM
5.11e-66FFCP PHASE2:Hg19::chr5:161112654..161112669,+#_a441d8eedf5a6701a552659d8bd53cc4p2@GABRA6
5.11e-66FFCP PHASE1:Hg19::chr5:161112654..161112669,+#_a441d8eedf5a6701a552659d8bd53cc4p2@GABRA6
5.11e-66FFCP PHASE2:Hg19::chr1:16366392..16366411,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr1:16366392..16366411, -
5.11e-66FFCP PHASE1:Hg19::chr2:149835088..149835109,+#_a441d8eedf5a6701a552659d8bd53cc4p9@KIF5C
5.11e-66FFCP PHASE2:Hg19::chr17:36720287..36720302,-#_a441d8eedf5a6701a552659d8bd53cc4p18@SRCIN1
5.11e-66FFCP PHASE1:Hg19::chr20:39790925..39790940,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr20:39790925..39790940, +
5.11e-66FFCP PHASE2:Hg19::chr3:98519943..98519958,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr3:98519943..98519958, -
5.11e-66FFCP PHASE2:Hg19::chr9:135538143..135538152,-#_a441d8eedf5a6701a552659d8bd53cc4p2@CU680380
5.11e-66FFCP PHASE1:Hg19::chr18:8783586..8783597,+#_a441d8eedf5a6701a552659d8bd53cc4p2@CCDC165
5.11e-66FFCP PHASE1:Hg19::chr17:72857611..72857619,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr17:72857611..72857619, -
5.11e-66FFCP PHASE2:Hg19::chr6:127533959..127533972,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr6:127533959..127533972, -
5.11e-66FFCP PHASE2:Hg19::chr17:72857611..72857619,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr17:72857611..72857619, -
5.11e-66FFCP PHASE1:Hg19::chr3:147125238..147125275,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr3:147125238..147125275, +
5.11e-66FFCP PHASE1:Hg19::chr18:8783637..8783650,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr18:8783637..8783650, +
5.11e-66FFCP PHASE2:Hg19::chr11:122733033..122733052,+#_a441d8eedf5a6701a552659d8bd53cc4p4@CRTAM
5.11e-66FFCP PHASE1:Hg19::chr14:77582905..77582916,+#_a441d8eedf5a6701a552659d8bd53cc4p5@TMEM63C
5.11e-66FFCP PHASE1:Hg19::chr6:34073743..34073761,-#_a441d8eedf5a6701a552659d8bd53cc4p1@GRM4
5.11e-66FFCP PHASE2:Hg19::chr17:72667462..72667471,+#_a441d8eedf5a6701a552659d8bd53cc4p11@RAB37
5.11e-66FFCP PHASE1:Hg19::chr11:123448159..123448170,+#_a441d8eedf5a6701a552659d8bd53cc4p4@AB384137
5.11e-66FFCP PHASE2:Hg19::chr11:123448159..123448170,+#_a441d8eedf5a6701a552659d8bd53cc4p4@AB384137
5.11e-66FFCP PHASE2:Hg19::chr17:50236110..50236119,-#_a441d8eedf5a6701a552659d8bd53cc4p22@CA10
5.11e-66FFCP PHASE2:Hg19::chr6:72922614..72922626,+#_a441d8eedf5a6701a552659d8bd53cc4p19@RIMS1
5.11e-66FFCP PHASE1:Hg19::chr6:127533978..127533993,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr6:127533978..127533993, -
5.11e-66FFCP PHASE1:Hg19::chr6:72922728..72922737,+#_a441d8eedf5a6701a552659d8bd53cc4p29@RIMS1
5.11e-66FFCP PHASE2:Hg19::chr3:147125238..147125275,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr3:147125238..147125275, +
5.11e-66FFCP PHASE1:Hg19::chr15:79724672..79724683,+#_a441d8eedf5a6701a552659d8bd53cc4p1@KIAA1024
5.11e-66FFCP PHASE2:Hg19::chr17:588423..588441,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr17:588423..588441, -
5.11e-66FFCP PHASE2:Hg19::chr15:81489280..81489292,+#_a441d8eedf5a6701a552659d8bd53cc4p15@IL16
5.11e-66FFCP PHASE1:Hg19::chr14:60031159..60031181,-#_a441d8eedf5a6701a552659d8bd53cc4p1@ENST00000556936
5.11e-66FFCP PHASE2:Hg19::chr18:8783637..8783650,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr18:8783637..8783650, +
5.11e-66FFCP PHASE2:Hg19::chr6:127533978..127533993,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr6:127533978..127533993, -
5.11e-66FFCP PHASE2:Hg19::chr14:60031159..60031181,-#_a441d8eedf5a6701a552659d8bd53cc4p1@ENST00000556936
5.11e-66FFCP PHASE2:Hg19::chr15:79724672..79724683,+#_a441d8eedf5a6701a552659d8bd53cc4p1@KIAA1024
5.11e-66FFCP PHASE1:Hg19::chr6:127533959..127533972,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr6:127533959..127533972, -
5.11e-66FFCP PHASE1:Hg19::chr9:135538143..135538152,-#_a441d8eedf5a6701a552659d8bd53cc4p2@CU680380
5.11e-66FFCP PHASE1:Hg19::chr14:52168958..52169000,+#_a441d8eedf5a6701a552659d8bd53cc4p27@FRMD6
5.11e-66FFCP PHASE1:Hg19::chr17:72667462..72667471,+#_a441d8eedf5a6701a552659d8bd53cc4p11@RAB37
5.11e-66FFCP PHASE2:Hg19::chr6:34073743..34073761,-#_a441d8eedf5a6701a552659d8bd53cc4p1@GRM4
1.63e-65FFCP PHASE2:Hg19::chr10:62149532..62149539,-#_35868b1c3bdee1baa0bb3307e28f96c8p38@ANK3
1.63e-65FFCP PHASE1:Hg19::chr10:62149532..62149539,-#_35868b1c3bdee1baa0bb3307e28f96c8p38@ANK3
2.29e-65FFCP PHASE1:Hg19::chrX:106692537..106692551,+#_909d1e3ce28b993e0b49b4f950266aeap@chrX:106692537..106692551, +
2.29e-65FFCP PHASE2:Hg19::chrX:106692537..106692551,+#_909d1e3ce28b993e0b49b4f950266aeap@chrX:106692537..106692551, +
8.77e-62FFCP PHASE2:Hg19::chr7:153445213..153445251,+#_9ac8f1ecc516e57b75f09616f474f555p@chr7:153445213..153445251, +
8.77e-62FFCP PHASE1:Hg19::chr7:153445213..153445251,+#_9ac8f1ecc516e57b75f09616f474f555p@chr7:153445213..153445251, +
9.7e-62FFCP PHASE2:Hg19::chr9:8779377..8779397,-#_10388c442398d05618e552008602f7dfp@chr9:8779377..8779397, -
9.7e-62FFCP PHASE1:Hg19::chr9:8779377..8779397,-#_10388c442398d05618e552008602f7dfp@chr9:8779377..8779397, -
2.04e-59FFCP PHASE2:Hg19::chr12:72332618..72332632,+#_d88a45b4a137dac98448fa44366eb19dp1@TPH2
2.04e-59FFCP PHASE1:Hg19::chr12:72332618..72332632,+#_d88a45b4a137dac98448fa44366eb19dp1@TPH2

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