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MacroAPE 1083:CNhs11990 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;124.12100716396925;41.9820231714098;51.06486426348211;243.95886917669824!2;9.10581641148089;58.01246671682129;111.3787880800352;282.62969256...")
 
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0827-111C8;0.650876!10789-110H6;0.818454!10828-111C9;0.281424!10788-110H5;0.507175!10792-110H9;0.841243!10765-110E9;0.834854!10829-111D1;0.871164!10830-111D2;0.685964!10831-111D3;0.703238!10832-111D4;0.863718!10833-111D5;0.688704!10764-110E8;0.540808!10770-110F5;0.572755!10399-106A3;0.731964!10400-106A4;0.743162!10405-106A9;0.69954!10834-111D6;0.777155!10835-111D7;0.603095!10836-111D8;0.857402!10837-111D9;0.933524!10699-109G6;0.98496!10802-111A1;0.656159!10796-110I4;0.693002!10010-101C1;0.148257!10810-111A9;0.926017!10421-106C7;0.791372!10708-109H6;0.406784!12235-129G3;0.334274!12236-129G4;0.877185!12237-129G5;0.978277!10167-103B5;0.207941!10151-102I7;0.82954!10428-106D5;0.871675!10795-110I3;0.0105743!10805-111A4;0.394196!10052-101G7;0.133786!10189-103D9;0.220372!10589-108D4;0.446885!10425-106D2;0.16691!10427-106D4;0.198941!10702-109G9;0.724853!10432-106D9;0.884279!10496-107C1;0.516809!10718-109I7;0.424779!10011-101C2;0.787668!10053-101G8;0.426891!10686-109F2;0.151077!10084-102B3;0.961281!10012-101C3;0.399221!10085-102B4;0.709154!10482-107A5;0.410446!10419-106C5;0.58271!10080-102A8;0.127921!10760-110E4;0.922666!10709-109H7;0.42891!10710-109H8;0.600416!10703-109H1;0.725073!10719-109I8;0.357091!10642-109A3;0.266616!10177-103C6;0.00381149!10164-103B2;0.188092!10173-103C2;0.297542!10166-103B4;0.201371!10083-102B2;0.237599!10188-103D8;0.198888!10552-107I3;0.51705!10553-107I4;0.0329665!10013-101C4;0.155356!10536-107G5;0.377601!10618-108G6;0.760227!10423-106C9;0.997793!10785-110H2;0.532458!12238-129G6;0.0573362!12239-129G7;0.494134!12240-129G8;0.276074!10416-106C2;0.267469!10801-110I9;0.820567!10766-110F1;0.605728!10824-111C5;0.798272!10825-111C6;0.603949!10826-111C7;0.591938!10454-106G4;0.434566!10409-106B4;0.803441!10638-108I8;0.778277!10636-108I6;0.0394485!10513-107D9;0.050613!10420-106C6;0.0136798!10082-102B1;0.0418926!10014-101C5;0.0803754!10070-101I7;0.066357!10452-106G2;0.0426097!10453-106G3;0.115974!10449-106F8;0.254895!10042-101F6;0.282553!10069-101I6;0.147232!10193-103E4;0.933836!10631-108I1;0.231094!10438-106E6;0.972025!10488-107B2;0.513423!10196-103E7;0.826458!10071-101I8;0.408837!10071-101I8;0.218264!10041-101F5;0.599537!10451-106G1;0.182611!10450-106F9;0.0682943!10604-108F1;0.0192427!10605-108F2;0.396926!10606-108F3;0.7301!10603-108E9;0.62744!10497-107C2;0.866601!10448-106F7;0.052181!10643-109A4;0.818952!10426-106D3;0.00592568!10431-106D8;0.617032!10197-103E8;0.46772!10443-106F2;0.947077!10815-111B5;0.269478!10816-111B6;0.234791!10817-111B7;0.176104!10015-101C6;0.180455!10410-106B5;0.834211!10054-101G9;0.534549!10758-110E2;0.679615!10711-109H9;0.702407!10040-101F4;0.45861!10470-106I2;0.606707!10415-106C1;0.199325!10198-103E9;0.943312!10614-108G2;0.705687!10612-108F9;0.543168!10549-107H9;0.894728!10615-108G3;0.383579!10487-107B1;0.257456!10433-106E1;0.530987!10688-109F4;0.538345!10444-106F3;0.0222439!10444-106F3;0.405174!10485-107A8;0.571751!10413-106B8;0.36301!10175-103C4;0.995389!10161-103A8;0.0887759!12131-128D7;0.122249!10624-108H3;0.618464!10712-109I1;0.380735!10205-103F7;0.828425!10206-103F8;0.713914!10207-103F9;0.92384!10050-101G5;0.544677!10051-101G6;0.866555!10016-101C7;0.811545!10046-101G1;0.834059!10778-110G4;0.43861!10633-108I3;0.898304!10818-111B8;0.074565!10819-111B9;0.201796!10820-111C1;0.217335!10484-107A7;0.17737!10808-111A7;0.0127412!10169-103B7;0.766573!10153-102I9;0.456029!13425-144D5;0.410134!13433-144E4;0.297698!13437-144E8;0.101833!11904-125F5;0.195855!11905-125F6;0.854247!10039-101F3;0.602693!10791-110H8;0.586086!10017-101C8;0.635559!10045-101F9;0.352672!10509-107D5;0.267606!10839-111E2;0.986854!10692-109F8;0.0340335!10079-102A7;0.921784!10078-102A6;0.63323!10721-110A1;0.933755!10569-108B2;0.559477!10570-108B3;0.478474!10571-108B4;0.534937!10647-109A8;0.478516!10752-110D5;0.161329!10782-110G8;0.703035!10726-110A6;0.456302!10018-101C9;0.887323!10086-102B5;0.592058!10182-103D2;0.74394!10165-103B3;0.23275!10499-107C4;0.176752!10408-106B3;0.0443821!10019-101D1;0.35163!10068-101I5;0.925988!10075-102A3;0.922007!10077-102A5;0.815104!10727-110A7;0.326053!10775-110G1;0.68791!10412-106B7;0.494778!12231-129F8;0.421708!12232-129F9;0.129825!12233-129G1;0.669224!12234-129G2;0.435177!10414-106B9;0.409811!10170-103B8;0.210748!10183-103D3;0.667413!10150-102I6;0.849503!10174-103C3;0.763457!10155-103A2;0.344935!10038-101F2;0.358851!10838-111E1;0.323543!10759-110E3;0.0535102!10514-107E1;0.592641!10465-106H6;0.0682897!10691-109F7;0.194024!10843-111E6;0.11386!10844-111E7;0.244638!11747-123G1;0.415086!11748-123G2;0.394818!11749-123G3;0.263031!11750-123G4;0.396357!11751-123G5;0.110935!11840-124H4;0.167929!11752-123G6;0.296907!11753-123G7;0.0216535!11754-123G8;0.128914!11755-123G9;0.256385!11756-123H1;0.342274!11833-124G6;0.201203!11760-123H5;0.0202192!11836-124G9;0.272988!11758-123H3;0.136951!11835-124G8;0.121456!11762-123H7;0.247202!11838-124H2;0.0637383!11757-123H2;0.440802!11759-123H4;0.125732!11761-123H6;0.164937!11842-124H6;0.0636468!11837-124H1;0.0513057!10568-108B1;0.286064!13230-141I8;0.194454!13231-141I9;0.97472!10696-109G3;0.83422!10493-107B7;0.915224!10494-107B8;0.538816!10850-111F4;0.540256!10851-111F5;0.185063!10852-111F6;0.69377!10853-111F7;0.636999!10854-111F8;0.400315!10855-111F9;0.0350004!10856-111G1;0.371678!10847-111F1;0.73767!10846-111E9;0.248354!10848-111F2;0.579558!10845-111E8;0.959017!10857-111G2;0.271573!10858-111G3;0.932529!10156-103A3;0.904821!11901-125F2;0.81088!11902-125F3;0.429316!11903-125F4;0.406208!10689-109F5;0.517492!10648-109A9;0.338304!10784-110H1;0.233004!10744-110C6;0.710066!10772-110F7;0.66474!10474-106I6;0.378405!10600-108E6;0.679748!10684-109E9;0.859126!12226-129F3;0.46844!12227-129F4;0.987678!10508-107D4;0.710202!10539-107G8;0.0449068!10607-108F4;0.340881!10555-107I6;0.0755332!10774-110F9;0.220345!10637-108I7;0.125203!10663-109C6;0.00370053!10728-110A8;0.0441482!10729-110A9;0.362346!10430-106D7;0.52445!10730-110B1;0.698224!10813-111B3;0.0924338!10812-111B2;0.604456!10037-101F1;0.93122!10172-103C1;0.445036!10163-103B1;0.816566!10076-102A4;0.475836!10073-102A1;0.709073!10036-101E9;0.618042!10195-103E6;0.547584!10277-104E7;0.957121!10434-106E2;0.266145!10550-107I1;0.729998!10545-107H5;0.0547409!10544-107H4;0.195131!10704-109H2;0.75128!10510-107D6;0.0610895!10558-107I9;0.0731958!10020-101D2;0.252772!10732-110B3;0.798898!10049-101G4;0.0449227!10698-109G5;0.449993!10437-106E5;0.937817!10417-106C3;0.611602!10035-101E8;0.865705!10171-103B9;0.603072!10157-103A4;0.700307!10034-101E7;0.690364!10072-101I9;0.587546!10199-103F1;0.278391!10200-103F2;0.117907!10697-109G4;0.413836!10723-110A3;0.17238!10179-103C8;0.649613!10160-103A7;0.346956!10180-103C9;0.298365!10162-103A9;0.544102!10021-101D3;0.916426!10840-111E3;0.304215!10706-109H4;0.352013!10033-101E6;0.520357!10032-101E5;0.475857!10490-107B4;0.728689!10439-106E7;0.0960513!10022-101D4;0.00747434!10176-103C5;0.419833!10469-106I1;0.262262!10067-101I4;0.301967!10411-106B6;0.0361637!10471-106I3;0.0423515!10030-101E3;0.0528123!10475-106I7;0.379362!10787-110H4;0.172847!10477-106I9;0.849893!10695-109G2;0.21161!11771-123I7;0.0480857!11772-123I8;0.00483623!11773-123I9;0.0240708!10093-102C3;0.0841187!10442-106F1;0.101314!10442-106F1;0.051538!10201-103F3;0.0597301!10639-108I9;0.232502!11843-124H7;0.214943!11841-124H5;0.826732!10693-109F9;0.198046!10436-106E4;0.48321!10483-107A6;0.453206!10282-104F3;0.945567!10023-101D5;0.767791!10066-101I3;0.853864!10065-101I2;0.937894!10800-110I8;0.413967!10610-108F7;0.0124445!10841-111E4;0.161092!10541-107H1;0.398929!10842-111E5;0.0248279!10562-108A4;0.200671!10024-101D6;0.0396898!10064-101I1;0.224745!10609-108F6;0.226231!10048-101G3;0.375186!10781-110G7;0.636989!10181-103D1;0.541923!10159-103A6;0.364122!10056-101H2;0.113035!10737-110B8;0.344544!10025-101D7;0.427185!10044-101F8;0.800322!10424-106D1;0.641046!10463-106H4;0.715154!10616-108G4;0.610256!10486-107A9;0.657957!10062-101H8;0.391229!10202-103F4;0.0496902!10158-103A5;0.773042!10441-106E9;0.440253!10031-101E4;0.139871!10063-101H9;0.617468!10063-101H9;0.590548!11763-123H8;0.324413!11765-123I1;0.592826!11768-123I4;0.241272!10807-111A6;0.905698!10790-110H7;0.030634!10798-110I6;0.223475!10786-110H3;0.113551!10591-108D6;0.401518!10593-108D8;0.655014!10590-108D5;0.703254!10026-101D8;0.676576!10096-102C6;0.558997!10168-103B6;0.857692!10154-103A1;0.19285!10209-103G2;0.219156!10061-101H7;0.348214!10027-101D9;0.583882!10043-101F7;0.9139!10783-110G9;0.593162!10028-101E1;0.28644!10060-101H6;0.662135!10203-103F5;0.763551!10059-101H5;0.182596!10047-101G2;0.460645!10029-101E2;0.0749519!10058-101H4;0.0405729!10418-106C4;0.426997!10492-107B6;0.470003!10694-109G1;0.323547!10797-110I5;0.0248911!10057-101H3;0.268302!10100-102D1;0.94329!10055-101H1;0.680719!10204-103F6;0.840804!10191-103E2;0.302973!10563-108A5;0.574401
|name=CNhs11990_bl_f1
|name=CNhs11990_bl_f1
|tomtom_result=SPT23#MA0388.1;0;0.000309994;0.147557;0.295115;8;TTAATTTCTTAA;TTGATTTC;-!br_Z1#MA0010.1;-2;0.00298285;1.41984;1;10;TTAATTTCTTAA;GATTTGTCTATTAC;-!SUM1#MA0398.1;0;0.00429915;2.0464;1;9;TTAATTTCTTAA;AAAATTTTT;+!PEND#MA0127.1;-3;0.00866562;4.12484;1;9;TTAATTTCTTAA;ACTTCTTATT;+!HMG-I/Y#MA0045.1;5;0.011736;5.58632;1;11;TTAATTTCTTAA;GTTTTTCCATTTGTTG;-!br_Z4#MA0013.1;-1;0.016486;7.84733;1;11;TTAATTTCTTAA;TTTGTTTACTA;-!fkh#MA0446.1;-1;0.0173864;8.27592;1;11;TTAATTTCTTAA;TGTTTGCTTAA;+!AZF1#MA0277.1;0;0.0181688;8.64833;1;9;TTAATTTCTTAA;TTTCTTTTT;-!tll#MA0459.1;1;0.0190617;9.07336;1;9;TTAATTTCTTAA;TTTGACTTTT;-
}}
}}

Latest revision as of 14:36, 7 September 2012

Full Name: CNhs11990_bl_f1

Motif matrix
POACGT
1124.1210071639692541.982023171409851.06486426348211243.95886917669824
29.1058164114808958.01246671682129111.3787880800352282.6296925672222
3166.0684451668430830.28275893665283128.3440147775089136.43154489455458
4264.8280218999471531.3014470683229385.0299395657790779.96735524151016
50.11437800097086127136.274485300090221.1325221116186426323.6053783628796
60.00.00.0461.12676377555925
70.00.03.578244022854491457.54851975270475
84.603564581344992312.56034277166546.867508767396307137.0953476551526
981.6194532080511339.193854052964781.2026082895498371339.11084822499345
1013.873734061622766179.7488025856866339.06486162677365228.43936550147635
11212.91604915876250.802831981555214.608569362028575192.79931327321378
12309.9325365943855716.15816170942039897.9635085272315137.072556944521914

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SPT23#MA0388.100.0003099940.1475570.2951158TTAATTTCTTAATTGATTTC-
br_Z1#MA0010.1-20.002982851.41984110TTAATTTCTTAAGATTTGTCTATTAC-
SUM1#MA0398.100.004299152.046419TTAATTTCTTAAAAAATTTTT+
PEND#MA0127.1-30.008665624.1248419TTAATTTCTTAAACTTCTTATT+
HMG-I/Y#MA0045.150.0117365.58632111TTAATTTCTTAAGTTTTTCCATTTGTTG-
br_Z4#MA0013.1-10.0164867.84733111TTAATTTCTTAATTTGTTTACTA-
fkh#MA0446.1-10.01738648.27592111TTAATTTCTTAATGTTTGCTTAA+
AZF1#MA0277.100.01816888.6483319TTAATTTCTTAATTTCTTTTT-
tll#MA0459.110.01906179.0733619TTAATTTCTTAATTTGACTTTT-
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