FFCP PHASE1:Mm9::chr16:91729561..91729635,+: Difference between revisions
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|id=chr16:91729561..91729635,+ | |id=chr16:91729561..91729635,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.88e-18!44;CL:0000133!2.88e-18!44;CL:0002319!7.04e-18!43;CL:0000055!1.33e-17!50;CL:0000540!2.31e-15!33;CL:0000047!2.31e-15!33;CL:0000031!2.31e-15!33;CL:0000404!2.31e-15!33;CL:0000393!1.37e-14!39;CL:0000211!1.37e-14!39;CL:0000117!6.43e-14!23;CL:0000337!6.43e-14!23;CL:0002321!4.11e-12!70;CL:0000220!4.11e-12!70 | |ontology_enrichment_celltype=CL:0000221!2.88e-18!44;CL:0000133!2.88e-18!44;CL:0002319!7.04e-18!43;CL:0000055!1.33e-17!50;CL:0000540!2.31e-15!33;CL:0000047!2.31e-15!33;CL:0000031!2.31e-15!33;CL:0000404!2.31e-15!33;CL:0000393!1.37e-14!39;CL:0000211!1.37e-14!39;CL:0000117!6.43e-14!23;CL:0000337!6.43e-14!23;CL:0002321!4.11e-12!70;CL:0000220!4.11e-12!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.79e-18,44;CL:0000133,2.79e-18,44;CL:0002319,6.81e-18,43;CL:0000540,2.24e-15,33;CL:0000047,2.24e-15,33;CL:0000031,2.24e-15,33;CL:0000404,2.24e-15,33;CL:0000393,1.34e-14,39;CL:0000211,1.34e-14,39;CL:0000117,6.27e-14,23;CL:0000337,6.27e-14,23;CL:0002321,3.19e-12,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.55e-17!75;UBERON:0001016!5.55e-17!75;UBERON:0001017!3.90e-16!73;UBERON:0005743!3.90e-16!73;UBERON:0004121!1.07e-15!102;UBERON:0000924!1.07e-15!102;UBERON:0006601!1.07e-15!102;UBERON:0002346!3.48e-10!71;UBERON:0003075!3.48e-10!71;UBERON:0007284!3.48e-10!71;UBERON:0001049!5.17e-10!52;UBERON:0005068!5.17e-10!52;UBERON:0006241!5.17e-10!52;UBERON:0007135!5.17e-10!52;UBERON:0000033!1.98e-09!63;UBERON:0002616!5.01e-09!49;UBERON:0002020!7.19e-09!34;UBERON:0000955!8.34e-09!50;UBERON:0006238!8.34e-09!50;UBERON:0003056!1.95e-07!49;UBERON:0002791!7.18e-07!29;UBERON:0003528!7.18e-07!29;UBERON:0001893!7.18e-07!29 | |ontology_enrichment_uberon=UBERON:0000073!5.55e-17!75;UBERON:0001016!5.55e-17!75;UBERON:0001017!3.90e-16!73;UBERON:0005743!3.90e-16!73;UBERON:0004121!1.07e-15!102;UBERON:0000924!1.07e-15!102;UBERON:0006601!1.07e-15!102;UBERON:0002346!3.48e-10!71;UBERON:0003075!3.48e-10!71;UBERON:0007284!3.48e-10!71;UBERON:0001049!5.17e-10!52;UBERON:0005068!5.17e-10!52;UBERON:0006241!5.17e-10!52;UBERON:0007135!5.17e-10!52;UBERON:0000033!1.98e-09!63;UBERON:0002616!5.01e-09!49;UBERON:0002020!7.19e-09!34;UBERON:0000955!8.34e-09!50;UBERON:0006238!8.34e-09!50;UBERON:0003056!1.95e-07!49;UBERON:0002791!7.18e-07!29;UBERON:0003528!7.18e-07!29;UBERON:0001893!7.18e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.41e-17,75;UBERON:0004121,5.82e-17,95;UBERON:0000924,5.82e-17,95;UBERON:0006601,5.82e-17,95;UBERON:0001017,3.80e-16,73;UBERON:0010371,6.93e-12,73;UBERON:0002346,1.77e-11,64;UBERON:0003075,1.77e-11,64;UBERON:0007284,1.77e-11,64;UBERON:0000073,4.89e-11,54;UBERON:0010314,1.52e-10,92;UBERON:0001049,5.10e-10,52;UBERON:0005068,5.10e-10,52;UBERON:0006241,5.10e-10,52;UBERON:0007135,5.10e-10,52;UBERON:0002020,7.08e-09,34;UBERON:0002616,1.09e-07,46;UBERON:0000955,1.73e-07,47;UBERON:0006238,1.73e-07,47;UBERON:0003056,1.93e-07,49;UBERON:0003528,7.11e-07,29;UBERON:0002791,7.11e-07,29;UBERON:0001893,7.11e-07,29 | |||
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| ||
|short_description=p1@Itsn1 | |short_description=p1@Itsn1 | ||
}} | }} |
Revision as of 18:31, 13 November 2012
Short description: | p1@Itsn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Itsn1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000056482, ENSMUST00000064797, ENSMUST00000095909, ENSMUST00000113996, ENSMUST00000113999, ENSMUST00000114002, NM_001110275, NM_001110276, NM_010587, uc007zyh.1, uc007zyi.2, uc007zyj.1_5end |
EntrezGene: | Itsn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.79e-18 | 44 |
neurectodermal cell | 2.79e-18 | 44 |
neural cell | 6.81e-18 | 43 |
neuron | 2.24e-15 | 33 |
neuronal stem cell | 2.24e-15 | 33 |
neuroblast | 2.24e-15 | 33 |
electrically signaling cell | 2.24e-15 | 33 |
electrically responsive cell | 1.34e-14 | 39 |
electrically active cell | 1.34e-14 | 39 |
CNS neuron (sensu Vertebrata) | 6.27e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.27e-14 | 23 |
embryonic cell | 3.19e-12 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.41e-17 | 75 |
ectoderm-derived structure | 5.82e-17 | 95 |
ectoderm | 5.82e-17 | 95 |
presumptive ectoderm | 5.82e-17 | 95 |
central nervous system | 3.80e-16 | 73 |
ecto-epithelium | 6.93e-12 | 73 |
neurectoderm | 1.77e-11 | 64 |
neural plate | 1.77e-11 | 64 |
presumptive neural plate | 1.77e-11 | 64 |
regional part of nervous system | 4.89e-11 | 54 |
structure with developmental contribution from neural crest | 1.52e-10 | 92 |
neural tube | 5.10e-10 | 52 |
neural rod | 5.10e-10 | 52 |
future spinal cord | 5.10e-10 | 52 |
neural keel | 5.10e-10 | 52 |
gray matter | 7.08e-09 | 34 |
regional part of brain | 1.09e-07 | 46 |
brain | 1.73e-07 | 47 |
future brain | 1.73e-07 | 47 |
pre-chordal neural plate | 1.93e-07 | 49 |
brain grey matter | 7.11e-07 | 29 |
regional part of telencephalon | 7.11e-07 | 29 |
telencephalon | 7.11e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.