FFCP PHASE1:Mm9::chr5:138187341..138187406,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr5:138187341..138187406,+ | |id=chr5:138187341..138187406,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.38e-08!23;UBERON:0000974!3.38e-08!23;UBERON:0004807!3.38e-08!23;UBERON:0005058!3.38e-08!23;UBERON:0003351!3.38e-08!23;UBERON:0009113!3.38e-08!23;UBERON:0003295!3.38e-08!23;UBERON:0009722!3.38e-08!23;UBERON:0005562!3.38e-08!23;UBERON:0007690!3.38e-08!23;UBERON:0003408!2.07e-07!24;UBERON:0006562!2.18e-07!24;UBERON:0001557!2.18e-07!24;UBERON:0001042!2.18e-07!24;UBERON:0008814!2.18e-07!24;UBERON:0009145!2.18e-07!24;UBERON:0004177!4.48e-07!29 | |ontology_enrichment_uberon=UBERON:0002370!3.38e-08!23;UBERON:0000974!3.38e-08!23;UBERON:0004807!3.38e-08!23;UBERON:0005058!3.38e-08!23;UBERON:0003351!3.38e-08!23;UBERON:0009113!3.38e-08!23;UBERON:0003295!3.38e-08!23;UBERON:0009722!3.38e-08!23;UBERON:0005562!3.38e-08!23;UBERON:0007690!3.38e-08!23;UBERON:0003408!2.07e-07!24;UBERON:0006562!2.18e-07!24;UBERON:0001557!2.18e-07!24;UBERON:0001042!2.18e-07!24;UBERON:0008814!2.18e-07!24;UBERON:0009145!2.18e-07!24;UBERON:0004177!4.48e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.17e-08,23;UBERON:0000974,3.17e-08,23;UBERON:0004807,3.17e-08,23;UBERON:0005058,3.17e-08,23;UBERON:0003351,3.17e-08,23;UBERON:0009113,3.17e-08,23;UBERON:0003295,3.17e-08,23;UBERON:0009722,3.17e-08,23;UBERON:0005562,3.17e-08,23;UBERON:0007690,3.17e-08,23;UBERON:0000926,1.42e-07,120;UBERON:0004120,1.42e-07,120;UBERON:0006603,1.42e-07,120;UBERON:0003408,1.95e-07,24;UBERON:0006562,2.05e-07,24;UBERON:0001557,2.05e-07,24;UBERON:0001042,2.05e-07,24;UBERON:0008814,2.05e-07,24;UBERON:0009145,2.05e-07,24;UBERON:0004177,4.24e-07,29;UBERON:0005057,4.24e-07,29;UBERON:0000153,7.55e-07,43 | |||
|phase1_expression=12.6517589212787,2.79180326111489,0.909998478779072,2.11724947914781,1.00179145989269,1.17515490338323,3.27057696833736,10.5881125222093,33.2261384277934,39.7909694747389,6.50628279256919,7.97721589953364,16.7776715332582,14.1621051918776,1.99865857089398,3.03712901084739,2.09868563438444,5.36285681109004,3.97631857456642,1.69755860719212,4.42225108785563,47.0639108692196,30.5603753292554,3.67982572424835,2.52350209173887,1.72269589234506,1.7230479846363,3.44753972297422,3.42042155021473,2.26827116783938,1.33038306393183,5.08024538767705,4.92051830067656,0,0.577703239502549,0.664938581433969,1.02084678131185,10.0447591376858,4.6880120671428,5.23523743973798,4.1176204162171,6.14740936462601,6.79714494243615,3.77690453926732,4.1564541800001,8.07605709511399,91.5397872887206,11.9913836009246,21.7489320907127,15.9432517240912,20.9979632438044,17.2503077237966,4.36234775750115,9.42970784614748,6.72187598284928,14.9210472900849,7.73640287834643,7.21940929188419,6.87875966922632,4.23192783417626,7.60597684207415,64.041616561066,43.5754450094458,13.498495759221,15.8218618010716,16.3410426437603,27.8628102782116,31.5059010363675,7.98410014775278,5.40023753326763,9.04397333810943,9.99778445413313,9.05561017901615,4.28717797252339,4.50473713785711,1.83843757322004,0,2.042997409363,1.22885226604995,4.74790635828698,5.39777097254217,4.68822033501084,1.95428099300967,0.56276261003168,1.83357897332172,7.95497180778903,6.97621235915604,5.40558392893372,4.46784540665786,5.7434385681157,5.50742528533188,6.0229671388697,0.679971333707751,0,0,0,3.37066608316204,3.57903677413921,4.41636207824877,4.59341446863442,8.87313544593087,11.5493829672886,0,7.11066703153331,1.73192832808971,2.02687892380079,3.0331466700887,3.4255163915718,4.91981978929626,2.22663208597237,26.5432549952188,11.5696881758614,10.6083128737787,7.53613202763113,9.17191915658498,2.26199864393416,8.89901883843746,1.59059292611903,5.30766331169925,9.86777784679196,7.28777010919299,7.75800405016355,1.86391761218122,2.92780797011547,6.49284791121711,2.29911349687732,7.78798309288482,6.59893004092748,8.38663498682227,2.69623150928681,0.457500602818626,4.90051973240171,1.39059456153821,3.06858548796397,1.0389402227978,2.59586020908412,18.8402823123085,6.96679035416521,2.0217820674694,0.420883711772948,17.6963802429277,11.9549094305406,19.4467100189777,11.4535661555143,8.91278138882395,6.66191345481219,7.58983968933804,2.84573707812917,17.8921434134259,15.5066985737612,17.9470146647228,24.5499220318884,22.2437799380478,21.5916343243743,14.404749548556,32.6416197582329,14.0442637462647,14.6688307055388,11.6507034752193,39.3538967817454,31.8955441574291,23.768192112854,31.2503050972478,22.6278866509514,20.5175260140213,18.1376476905318,16.3646774853768,16.5806786161381,13.9875872426458,14.1184019108022,12.4035278605159,10.2339991197733,9.66020507280623,4.2946054003319,0.841159794256509,11.8340304236177,1.65209391491899,4.23120906661671,32.2065258308203,28.1006372951131,24.871420035164,17.9498336914775,14.4545728499166,14.2669219584419,1.42358718463353,8.89374355509659,9.0480675168097,8.15721535368718,7.79856348476481,1.79763881730844,1.94524244887225,2.78797782556114,32.2435431620239,17.4800224292885,23.6686244913469,21.7906920794486,14.5464365375719,16.2013743946636,7.58838445491087,3.39503340353085,2.82597710114475,5.79966670432462,1.48226313543574,17.5187361001899,14.7419246334902,10.5685192820881,10.7515864335907,9.16473207059184,7.12952384987975,5.75392274901621,11.9980067813526,5.49122826376163,17.2521847832825,6.69853705803306,3.12037673114561,2.52578877947112,0.538192240565737,1.92977408545347,2.21703828199926,22.9284608242287,29.6596257124487,20.5391553787978,18.5405296147917,20.938282180227,17.377185784679,14.0496226457615,9.30047350226527,10.4088404134924,6.53764551495697,3.11340297959902,2.93564469172023,2.60368305446721,7.53956419696361,13.5976420954677,2.45882136509518,2.75936746304733,1.60550589987792,2.34423373184406,8.85248705034047,2.01976741763498,19.5615096038079,23.8167634020949,19.3881057959519,29.1541933502113,28.0726329343817,20.6645867475848,27.1223170122179,21.6269334854371,22.9266911208984,1.60660658210904,8.23252494207958,36.3253831481201,23.455722146915,10.3931177472697,1.32745138339963,20.1507928008635,14.8138542912728,9.43025398779491,15.651000322681,8.60818414242997,7.49442050187841,7.27067458955011,5.70395805415554,0.948110273807448,1.05418608574999,4.12542172992747,1.70219802876894,16.9257428389432,28.5882691159887,21.8623775732224,23.7635913080647,17.8368817602071,14.973960874793,14.3098526083862,7.74416636610244,6.14313005505079,1.7642271844397,3.95727007059552,13.5630118424561,5.00597276903694,3.22305328808468,2.1338316966858,4.37221254944776,1.29797711407357,5.29699730473343,35.9113150256007,17.4082855727529,5.46268525313604,5.19438065339896,5.71945433016307,7.13909405974192,7.97723278244851,7.87739850685216,0,31.7917673549041,24.3983360552218,18.6849239621716,14.6361807210128,13.7568415160092,9.57536859332227,9.00922667406162,3.92633912976044,3.24037433229482,2.4853572523477,6.76431526421028,30.3518588469277,26.1424414922214,28.9732270632631,29.1901201059672,21.7953401883104,27.2268793658149,18.8796358023728,14.9948862528767,6.03960302065015,3.45636007509439,75.5266578301346,32.4360344464263,27.5265365201737,35.9880679648492,54.9611955699168,56.0281420483167,35.4576576083908,51.691334511102,44.425237977185,47.9340813859949,44.0610429047993,47.5594458009992,51.3771234359359,53.0621135904323,2.26730383615211,22.8645531975287,25.9273045601385,24.1753847564273,7.53439416725543,8.25802891985201,9.15758121336325,2.57242054894879,3.00943262421218,1.12950368523413,1.84130094602871,0.572895513439397,1.89038500578056,2.05524755931193,0.755393897389701,1.35004500046361,1.35096360967266,1.35942722695261,0,17.5400617417259,28.3307660114732,17.75629499843,22.1227112532148,22.0093820759381,19.3035683872515,14.446037307105,12.7741735488114,14.1204452220399,13.8983466470089,12.9274442944022,11.3175804831646,14.1398676279522,13.3812568526177,14.2439963009921,15.7176918123414,13.0949288317687,13.1178269915319,13.5988347265091,11.9231125308862,12.0004238334895,13.665637074269,9.77588378784016,11.7730597472186,11.387235030255,10.8306698101346,16.2805895856768,12.6273461490165,11.81495790459,12.906272248128,10.3212465768031,13.0025916735744,13.5046244245997,12.7048209772492,15.2396222675102,18.2361721894701,10.5269223800434,15.4707158914775,17.2159498861959,9.26483960301965,6.4922993973718 | |phase1_expression=12.6517589212787,2.79180326111489,0.909998478779072,2.11724947914781,1.00179145989269,1.17515490338323,3.27057696833736,10.5881125222093,33.2261384277934,39.7909694747389,6.50628279256919,7.97721589953364,16.7776715332582,14.1621051918776,1.99865857089398,3.03712901084739,2.09868563438444,5.36285681109004,3.97631857456642,1.69755860719212,4.42225108785563,47.0639108692196,30.5603753292554,3.67982572424835,2.52350209173887,1.72269589234506,1.7230479846363,3.44753972297422,3.42042155021473,2.26827116783938,1.33038306393183,5.08024538767705,4.92051830067656,0,0.577703239502549,0.664938581433969,1.02084678131185,10.0447591376858,4.6880120671428,5.23523743973798,4.1176204162171,6.14740936462601,6.79714494243615,3.77690453926732,4.1564541800001,8.07605709511399,91.5397872887206,11.9913836009246,21.7489320907127,15.9432517240912,20.9979632438044,17.2503077237966,4.36234775750115,9.42970784614748,6.72187598284928,14.9210472900849,7.73640287834643,7.21940929188419,6.87875966922632,4.23192783417626,7.60597684207415,64.041616561066,43.5754450094458,13.498495759221,15.8218618010716,16.3410426437603,27.8628102782116,31.5059010363675,7.98410014775278,5.40023753326763,9.04397333810943,9.99778445413313,9.05561017901615,4.28717797252339,4.50473713785711,1.83843757322004,0,2.042997409363,1.22885226604995,4.74790635828698,5.39777097254217,4.68822033501084,1.95428099300967,0.56276261003168,1.83357897332172,7.95497180778903,6.97621235915604,5.40558392893372,4.46784540665786,5.7434385681157,5.50742528533188,6.0229671388697,0.679971333707751,0,0,0,3.37066608316204,3.57903677413921,4.41636207824877,4.59341446863442,8.87313544593087,11.5493829672886,0,7.11066703153331,1.73192832808971,2.02687892380079,3.0331466700887,3.4255163915718,4.91981978929626,2.22663208597237,26.5432549952188,11.5696881758614,10.6083128737787,7.53613202763113,9.17191915658498,2.26199864393416,8.89901883843746,1.59059292611903,5.30766331169925,9.86777784679196,7.28777010919299,7.75800405016355,1.86391761218122,2.92780797011547,6.49284791121711,2.29911349687732,7.78798309288482,6.59893004092748,8.38663498682227,2.69623150928681,0.457500602818626,4.90051973240171,1.39059456153821,3.06858548796397,1.0389402227978,2.59586020908412,18.8402823123085,6.96679035416521,2.0217820674694,0.420883711772948,17.6963802429277,11.9549094305406,19.4467100189777,11.4535661555143,8.91278138882395,6.66191345481219,7.58983968933804,2.84573707812917,17.8921434134259,15.5066985737612,17.9470146647228,24.5499220318884,22.2437799380478,21.5916343243743,14.404749548556,32.6416197582329,14.0442637462647,14.6688307055388,11.6507034752193,39.3538967817454,31.8955441574291,23.768192112854,31.2503050972478,22.6278866509514,20.5175260140213,18.1376476905318,16.3646774853768,16.5806786161381,13.9875872426458,14.1184019108022,12.4035278605159,10.2339991197733,9.66020507280623,4.2946054003319,0.841159794256509,11.8340304236177,1.65209391491899,4.23120906661671,32.2065258308203,28.1006372951131,24.871420035164,17.9498336914775,14.4545728499166,14.2669219584419,1.42358718463353,8.89374355509659,9.0480675168097,8.15721535368718,7.79856348476481,1.79763881730844,1.94524244887225,2.78797782556114,32.2435431620239,17.4800224292885,23.6686244913469,21.7906920794486,14.5464365375719,16.2013743946636,7.58838445491087,3.39503340353085,2.82597710114475,5.79966670432462,1.48226313543574,17.5187361001899,14.7419246334902,10.5685192820881,10.7515864335907,9.16473207059184,7.12952384987975,5.75392274901621,11.9980067813526,5.49122826376163,17.2521847832825,6.69853705803306,3.12037673114561,2.52578877947112,0.538192240565737,1.92977408545347,2.21703828199926,22.9284608242287,29.6596257124487,20.5391553787978,18.5405296147917,20.938282180227,17.377185784679,14.0496226457615,9.30047350226527,10.4088404134924,6.53764551495697,3.11340297959902,2.93564469172023,2.60368305446721,7.53956419696361,13.5976420954677,2.45882136509518,2.75936746304733,1.60550589987792,2.34423373184406,8.85248705034047,2.01976741763498,19.5615096038079,23.8167634020949,19.3881057959519,29.1541933502113,28.0726329343817,20.6645867475848,27.1223170122179,21.6269334854371,22.9266911208984,1.60660658210904,8.23252494207958,36.3253831481201,23.455722146915,10.3931177472697,1.32745138339963,20.1507928008635,14.8138542912728,9.43025398779491,15.651000322681,8.60818414242997,7.49442050187841,7.27067458955011,5.70395805415554,0.948110273807448,1.05418608574999,4.12542172992747,1.70219802876894,16.9257428389432,28.5882691159887,21.8623775732224,23.7635913080647,17.8368817602071,14.973960874793,14.3098526083862,7.74416636610244,6.14313005505079,1.7642271844397,3.95727007059552,13.5630118424561,5.00597276903694,3.22305328808468,2.1338316966858,4.37221254944776,1.29797711407357,5.29699730473343,35.9113150256007,17.4082855727529,5.46268525313604,5.19438065339896,5.71945433016307,7.13909405974192,7.97723278244851,7.87739850685216,0,31.7917673549041,24.3983360552218,18.6849239621716,14.6361807210128,13.7568415160092,9.57536859332227,9.00922667406162,3.92633912976044,3.24037433229482,2.4853572523477,6.76431526421028,30.3518588469277,26.1424414922214,28.9732270632631,29.1901201059672,21.7953401883104,27.2268793658149,18.8796358023728,14.9948862528767,6.03960302065015,3.45636007509439,75.5266578301346,32.4360344464263,27.5265365201737,35.9880679648492,54.9611955699168,56.0281420483167,35.4576576083908,51.691334511102,44.425237977185,47.9340813859949,44.0610429047993,47.5594458009992,51.3771234359359,53.0621135904323,2.26730383615211,22.8645531975287,25.9273045601385,24.1753847564273,7.53439416725543,8.25802891985201,9.15758121336325,2.57242054894879,3.00943262421218,1.12950368523413,1.84130094602871,0.572895513439397,1.89038500578056,2.05524755931193,0.755393897389701,1.35004500046361,1.35096360967266,1.35942722695261,0,17.5400617417259,28.3307660114732,17.75629499843,22.1227112532148,22.0093820759381,19.3035683872515,14.446037307105,12.7741735488114,14.1204452220399,13.8983466470089,12.9274442944022,11.3175804831646,14.1398676279522,13.3812568526177,14.2439963009921,15.7176918123414,13.0949288317687,13.1178269915319,13.5988347265091,11.9231125308862,12.0004238334895,13.665637074269,9.77588378784016,11.7730597472186,11.387235030255,10.8306698101346,16.2805895856768,12.6273461490165,11.81495790459,12.906272248128,10.3212465768031,13.0025916735744,13.5046244245997,12.7048209772492,15.2396222675102,18.2361721894701,10.5269223800434,15.4707158914775,17.2159498861959,9.26483960301965,6.4922993973718 | ||
|short_description=p3@Tsc22d4 | |short_description=p3@Tsc22d4 | ||
}} | }} |
Revision as of 23:41, 13 November 2012
Short description: | p3@Tsc22d4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tsc22d4_5end |
Coexpression cluster: | NA |
Association with transcript: | 117bp_to_ENSMUST00000100539, uc009adt.1, uc009adu.1, uc009adv.1_5end |
EntrezGene: | Tsc22d4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.17e-08 | 23 |
neck | 3.17e-08 | 23 |
respiratory system epithelium | 3.17e-08 | 23 |
hemolymphoid system gland | 3.17e-08 | 23 |
pharyngeal epithelium | 3.17e-08 | 23 |
thymic region | 3.17e-08 | 23 |
pharyngeal gland | 3.17e-08 | 23 |
entire pharyngeal arch endoderm | 3.17e-08 | 23 |
thymus primordium | 3.17e-08 | 23 |
early pharyngeal endoderm | 3.17e-08 | 23 |
mesoderm | 1.42e-07 | 120 |
mesoderm-derived structure | 1.42e-07 | 120 |
presumptive mesoderm | 1.42e-07 | 120 |
gland of gut | 1.95e-07 | 24 |
pharynx | 2.05e-07 | 24 |
upper respiratory tract | 2.05e-07 | 24 |
chordate pharynx | 2.05e-07 | 24 |
pharyngeal arch system | 2.05e-07 | 24 |
pharyngeal region of foregut | 2.05e-07 | 24 |
hemopoietic organ | 4.24e-07 | 29 |
immune organ | 4.24e-07 | 29 |
anterior region of body | 7.55e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.