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FFCP PHASE1:Mm9::chr12:112404624..112404682,+: Difference between revisions

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|id=chr12:112404624..112404682,+
|id=chr12:112404624..112404682,+
|ontology_enrichment_celltype=CL:0000117!4.28e-10!23;CL:0000337!4.28e-10!23
|ontology_enrichment_celltype=CL:0000117!4.28e-10!23;CL:0000337!4.28e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.28e-10,23;CL:0000337,4.28e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!8.48e-16!52;UBERON:0005068!8.48e-16!52;UBERON:0006241!8.48e-16!52;UBERON:0007135!8.48e-16!52;UBERON:0002616!1.25e-13!49;UBERON:0007811!1.43e-13!86;UBERON:0000955!1.72e-13!50;UBERON:0006238!1.72e-13!50;UBERON:0001017!7.08e-13!73;UBERON:0005743!7.08e-13!73;UBERON:0000153!1.12e-12!94;UBERON:0002020!1.88e-12!34;UBERON:0003080!3.24e-12!40;UBERON:0000033!3.54e-12!63;UBERON:0002780!9.70e-12!39;UBERON:0001890!9.70e-12!39;UBERON:0006240!9.70e-12!39;UBERON:0003056!1.38e-11!49;UBERON:0000073!1.44e-11!75;UBERON:0001016!1.44e-11!75;UBERON:0002346!1.51e-10!71;UBERON:0003075!1.51e-10!71;UBERON:0007284!1.51e-10!71;UBERON:0000064!1.18e-09!99;UBERON:0002791!1.69e-09!29;UBERON:0003528!1.69e-09!29;UBERON:0001893!1.69e-09!29;UBERON:0004121!6.63e-08!102;UBERON:0000924!6.63e-08!102;UBERON:0006601!6.63e-08!102
|ontology_enrichment_uberon=UBERON:0001049!8.48e-16!52;UBERON:0005068!8.48e-16!52;UBERON:0006241!8.48e-16!52;UBERON:0007135!8.48e-16!52;UBERON:0002616!1.25e-13!49;UBERON:0007811!1.43e-13!86;UBERON:0000955!1.72e-13!50;UBERON:0006238!1.72e-13!50;UBERON:0001017!7.08e-13!73;UBERON:0005743!7.08e-13!73;UBERON:0000153!1.12e-12!94;UBERON:0002020!1.88e-12!34;UBERON:0003080!3.24e-12!40;UBERON:0000033!3.54e-12!63;UBERON:0002780!9.70e-12!39;UBERON:0001890!9.70e-12!39;UBERON:0006240!9.70e-12!39;UBERON:0003056!1.38e-11!49;UBERON:0000073!1.44e-11!75;UBERON:0001016!1.44e-11!75;UBERON:0002346!1.51e-10!71;UBERON:0003075!1.51e-10!71;UBERON:0007284!1.51e-10!71;UBERON:0000064!1.18e-09!99;UBERON:0002791!1.69e-09!29;UBERON:0003528!1.69e-09!29;UBERON:0001893!1.69e-09!29;UBERON:0004121!6.63e-08!102;UBERON:0000924!6.63e-08!102;UBERON:0006601!6.63e-08!102
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.14e-16,54;UBERON:0001049,8.48e-16,52;UBERON:0005068,8.48e-16,52;UBERON:0006241,8.48e-16,52;UBERON:0007135,8.48e-16,52;UBERON:0002346,7.93e-14,64;UBERON:0003075,7.93e-14,64;UBERON:0007284,7.93e-14,64;UBERON:0001017,7.08e-13,73;UBERON:0010371,1.43e-12,73;UBERON:0002020,1.88e-12,34;UBERON:0002616,2.21e-12,46;UBERON:0000955,3.00e-12,47;UBERON:0006238,3.00e-12,47;UBERON:0003080,3.24e-12,40;UBERON:0002780,9.70e-12,39;UBERON:0001890,9.70e-12,39;UBERON:0006240,9.70e-12,39;UBERON:0003056,1.38e-11,49;UBERON:0001016,1.44e-11,75;UBERON:0004121,5.07e-10,95;UBERON:0000924,5.07e-10,95;UBERON:0006601,5.07e-10,95;UBERON:0003528,1.69e-09,29;UBERON:0002791,1.69e-09,29;UBERON:0001893,1.69e-09,29
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|phase1_expression=5.76535849577258,11.5161884520989,9.09998478779072,4.83942738090928,7.51343594919521,9.73699777088961,9.81173090501208,15.8821687833139,13.7972947708633,11.9372908424217,11.9852577757853,15.3162545271046,15.7504671536709,14.0746847894586,6.32908547449759,3.84703008040669,2.09868563438444,19.0854610041734,23.0352248457641,17.3999757237192,4.42225108785563,3.87234709683453,3.6567970479451,6.39969691173627,5.50582274561208,5.7423196411502,7.32295393470427,7.75696437669201,4.75058548640935,5.04060259519861,5.32153225572731,3.17515336729816,3.07532393792285,15.8481681015439,2.3108129580102,4.48833542467929,3.67504841272264,24.6933662134776,11.720030167857,10.470474879476,19.9998705930545,21.8574555186703,22.3334762394331,5.28766635497425,4.25783111121961,2.56965453026354,3.12956537739216,7.63088047331563,5.27246838562732,5.8328969722285,4.75953833526233,11.5002051491977,16.9460432118314,24.6623128283857,14.7881271622684,6.43148590089868,4.58453503902011,5.15672092277442,13.9598357993122,11.6378015439847,15.8457850876545,2.37191172448392,1.77858959222228,2.6996991518442,1.97773272513395,6.3943210345149,4.49400165777607,4.61061966385865,5.80661828927475,5.67024940993101,6.94072372459561,27.7081454871689,20.3199057675484,5.14461356702807,8.53024692062304,10.1114066527102,9.91042928994498,11.7472351038373,10.9060638611933,14.3756053625911,13.2657083223494,12.5019208933622,15.6342479440773,14.069065250792,13.7518422999129,16.4992007865254,16.9422300150933,15.8439528951505,3.02904773332736,2.49386148352392,7.24661221754194,2.58127163094416,2.03991400112325,3.2382191498269,1.94932925234301,3.13618820968135,4.0728881838208,3.91989741929533,2.85764605063156,3.18005617059306,5.49289337129054,5.13305909657271,0,7.11066703153331,8.65964164044856,12.1612735428047,9.0994400102661,4.22480354960522,11.3932668804756,5.49235914539852,3.81667718885499,2.13125834818499,2.99800146432876,2.11011696773672,3.52766121407114,5.27799683584637,3.70792451601561,4.19338135067744,7.07688441559899,9.70601099684455,4.63767188766826,2.90925151881133,1.86391761218122,3.22058876712702,10.4723353406728,6.89734049063197,5.03223522924865,2.39961092397363,3.68503658511888,12.8819949888148,6.40500843946077,5.52879149296603,9.73416193076748,14.0643501531682,9.97382613885888,13.1415423084884,5.70300437561771,6.34475550111474,4.0435641349388,8.83855794723191,5.85541993332167,3.44853156650209,6.66229880279792,5.27466862425003,5.17077393550092,5.50888997224854,5.99691037182265,6.20888089773638,2.80238390812695,3.21480336285293,4.75068035242662,7.01426343768239,5.00485048606076,6.268538997399,4.52720700097476,5.9710280045548,3.51106593656617,4.63226232806487,6.25159698670304,3.10688658803253,3.28336483973535,4.8616756594474,4.02466050494857,3.73852040320067,2.62254091908543,3.95307706075693,3.75582761959467,3.03589890154641,2.96207729844265,4.10418660197738,4.62092214411378,6.72519942156529,7.90380415047782,4.42881181909227,13.8791366052324,6.89460902941206,6.93879444265976,4.23120906661671,3.19932375802851,4.87697010906921,4.25262622362908,2.21851877085677,2.66853652613844,3.04361001780095,3.32170343081158,3.29397909448022,4.27269854960458,2.78539060857611,3.50935356814416,4.49409704327111,5.61958929674205,2.38969527905241,3.98302592001472,4.68418901699888,6.76246414038483,4.07302655690629,2.71533482034676,3.36651935473529,4.93244989569207,2.80459281161244,3.1399745568275,3.82531208157582,3.55743152504579,3.17005700860579,1.76903095601883,1.79889689907883,1.82574109249653,3.37648023653384,2.03700681425136,3.16465751195892,1.94562272130042,2.47105271869273,4.31304619582064,1.48856379067401,2.49630138491648,3.03094653536534,2.69096120282868,0.964887042726734,6.09685527549795,5.49525094134406,4.88894929326078,5.09235257325564,3.52035372432753,2.68010011906905,5.2369600994923,4.87834119644497,6.46304090835383,4.20782910332672,5.74037167166954,5.73521601505083,8.97961905702657,6.07526046042349,6.03165135757089,5.98296252200581,4.91764273019036,6.34654516500885,12.8440471990234,20.8636802134122,5.08198330667694,8.33154059774431,3.47059041357882,4.29482618726302,4.52389135238878,2.62865677747807,4.01037613348309,3.96307143104365,4.45291771842384,3.21481443702443,2.76701444562566,5.46246237917072,3.40656204499845,4.98583690268315,4.39794790254655,8.08353602565424,10.619611067197,2.42780636154981,4.53485335447127,2.82907619633847,3.83892460745005,6.14870295887855,5.42699415653264,5.81653967164009,6.06045543254026,8.84902922220285,9.48767477174989,14.4389760547462,8.17055053809091,6.84232157318979,6.46793418913772,8.3591443662321,7.09360934569094,7.84822797449111,5.92376474167636,6.69822888052118,4.22409074514679,4.2366414172764,5.95426674748397,3.79238381765404,4.68246837418126,5.30753739367772,4.17803204010978,6.23735419031233,2.91480836629851,11.1255181206306,6.83483523191411,4.54051109519089,3.1483069652851,3.01389531207506,7.24479406921433,6.63456702298916,7.64902934972349,4.47844647435706,6.63359874261234,0.954670618015114,4.11236791655476,3.45643094115643,4.53622431451565,4.39085421630384,3.49380101993884,4.5853877770839,4.46328660916814,6.28214260761671,4.40690909192096,4.97071450469541,0.56369293868419,3.13984746692355,3.14371131868485,6.22243802700952,5.16639293910924,4.89972763923257,4.3422178298929,3.6457227756306,3.98465508817701,2.65742532908607,2.88030006257865,5.05617793005085,4.66267995167378,4.00572732942826,4.54722880422283,4.47566739168704,3.57626438606277,6.73094517311826,7.53216588590344,5.95702054694071,6.85861259894999,6.55370203389463,6.33476224808391,6.34998154826174,5.37633750035217,3.40095575422817,3.32978930061097,2.87084341150322,3.35769232728157,7.14801497919105,4.50437941082837,5.31139710375069,4.93047271881851,3.00943262421218,20.3310663342144,18.4130094602871,18.9055519435001,22.1690605223357,8.90607275701835,12.8416962556249,10.1253375034771,10.8077088773813,8.15656336171568,8.28416498802912,5.39694207437719,5.98537310101547,5.80494259564056,6.56388136084394,3.5634237646757,7.72142735490059,4.4449345560323,4.73880631649457,5.77654577265267,5.05394423527595,9.63221339582911,5.47016390019621,5.89941497060259,4.86591158277006,5.74354689556133,4.28664322154766,8.22778714208474,5.98018583437486,4.94503080963968,6.47675248591348,5.48590803816665,3.90446773550542,4.05341522910446,5.66851024866081,4.14081273827455,7.10762706290083,5.48783918618318,4.47218509444333,6.11118512306378,6.17256498823512,5.81311588808453,6.50129583678719,4.91077251803627,5.26785260032284,7.9091710502268,5.9954538705107,7.01794825336225,6.01638951335235,7.26895661861605,3.08827986767322,4.86922454802885
|short_description=p1@Traf3
|short_description=p1@Traf3
}}
}}

Revision as of 00:19, 14 November 2012

Short description:p1@Traf3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Traf3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000021706_5end
EntrezGene:Traf3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Traf3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.75
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.07
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.04
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A617.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G824.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G920.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H221.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H422.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.26
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.63
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.95
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I924.66
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.79
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.43
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C313.96
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.32
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.38
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.84
Mouse Schwann, donor1.CNhs12507.11728-123D93.03
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D75.49
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F59.71
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H76.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A412.88
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F214.06
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B213.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G48.84
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C65.17
eyeball, neonate N01.CNhs11140.1532-43E75.51
eyeball, neonate N02.CNhs11205.1551-44G86.00
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I65.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I94.86
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G14.62
heart, neonate N20.CNhs11127.821-26I66.73
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E813.88
hippocampus, neonate N00.CNhs11228.627-43G16.89
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E65.74
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C78.98
lung, neonate N30.CNhs11133.1394-42H26.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C212.84
medulla oblongata, neonate N30.CNhs11200.1396-42A320.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C76.47
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F67.85
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H35.31
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C46.24
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G26.83
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H17.24
spleen, neonate N25.CNhs11099.1354-25G36.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.63
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D44.54
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A94.46
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I55.17
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D93.98
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C14.48
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F86.73
thymus, neonate N03.CNhs11137.2104-43C77.53
thymus, neonate N06.CNhs11197.681-26C45.96
thymus, neonate N07.CNhs11211.713-19D36.86
thymus, neonate N10.CNhs11194.748-24E46.55
thymus, neonate N20.CNhs11186.820-7A26.33
thymus, neonate N25.CNhs11125.1362-25G76.35
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E47.15
uterus, adult pregnant day19.CNhs10497.590-15F54.50
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I85.40
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.50
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.28e-1023
neuroblast (sensu Vertebrata)4.28e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.14e-1654
neural tube8.48e-1652
neural rod8.48e-1652
future spinal cord8.48e-1652
neural keel8.48e-1652
neurectoderm7.93e-1464
neural plate7.93e-1464
presumptive neural plate7.93e-1464
central nervous system7.08e-1373
ecto-epithelium1.43e-1273
gray matter1.88e-1234
regional part of brain2.21e-1246
brain3.00e-1247
future brain3.00e-1247
anterior neural tube3.24e-1240
regional part of forebrain9.70e-1239
forebrain9.70e-1239
future forebrain9.70e-1239
pre-chordal neural plate1.38e-1149
nervous system1.44e-1175
ectoderm-derived structure5.07e-1095
ectoderm5.07e-1095
presumptive ectoderm5.07e-1095
brain grey matter1.69e-0929
regional part of telencephalon1.69e-0929
telencephalon1.69e-0929







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