FFCP PHASE1:Mm9::chr1:87546572..87546579,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr1:87546572..87546579,+ | |id=chr1:87546572..87546579,+ | ||
|ontology_enrichment_celltype=CL:0000553!3.02e-07!6;CL:0000556!3.02e-07!6 | |ontology_enrichment_celltype=CL:0000553!3.02e-07!6;CL:0000556!3.02e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.16e-23,6;CL:0000556,1.16e-23,6;CL:0000839,5.42e-19,13;CL:0000049,5.64e-16,19;CL:0000050,1.29e-15,9;CL:0000763,3.20e-15,16;CL:0002027,8.61e-13,3;CL:0002006,8.61e-13,3;CL:0002024,8.61e-13,3;CL:0002476,1.82e-09,2;CL:0002031,2.49e-09,25;CL:0000473,2.99e-09,7;CL:0000988,6.54e-09,32;CL:0002032,6.54e-09,32;CL:0000037,6.54e-09,32;CL:0000837,6.54e-09,32;CL:0002320,3.37e-07,46;CL:0000134,3.37e-07,46;CL:0000355,6.17e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.02e-12,3;DOID:4045,3.02e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.04e-11!48;UBERON:0002390!1.93e-09!45;UBERON:0003061!1.93e-09!45;UBERON:0002204!1.16e-08!32;UBERON:0003081!1.57e-08!88;UBERON:0002405!1.11e-07!70 | |ontology_enrichment_uberon=UBERON:0002193!5.04e-11!48;UBERON:0002390!1.93e-09!45;UBERON:0003061!1.93e-09!45;UBERON:0002204!1.16e-08!32;UBERON:0003081!1.57e-08!88;UBERON:0002405!1.11e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.63e-22,32;UBERON:0001474,8.94e-17,22;UBERON:0004765,8.94e-17,22;UBERON:0001434,8.94e-17,22;UBERON:0002371,3.20e-15,16;UBERON:0002193,3.27e-08,48;UBERON:0002405,3.27e-08,48;UBERON:0002390,2.56e-07,45;UBERON:0003061,2.56e-07,45;UBERON:0002384,3.37e-07,46;UBERON:0001134,6.17e-07,9;UBERON:0002036,6.17e-07,9;UBERON:0002385,6.17e-07,9;UBERON:0000486,6.17e-07,9;UBERON:0007503,6.17e-07,9;UBERON:0001015,6.17e-07,9;UBERON:0002329,6.17e-07,9;UBERON:0003082,6.17e-07,9;UBERON:0003059,6.17e-07,9;UBERON:0007282,6.17e-07,9;UBERON:0004290,6.17e-07,9;UBERON:0009618,6.17e-07,9 | |||
|phase1_expression=0,1.04692622291808,0,0.30246421130683,0,0.16787927191189,0,0.387369970324729,0,0,0,0,0,0.437102012094987,1.66554880907831,5.4668322195253,2.79824751251259,5.20512572841092,1.64537320326887,1.69755860719212,0.0850432901510698,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,1.29228598847722,1.07735616342945,0,0,0,0,0,0,0,0,0,1.67412652294763,3.906676722619,1.0470474879476,0.588231488031014,0,1.94204141212461,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,0.838913030288682,0.725362142011344,0.336093799142464,0.257259436035947,0,1.03134418455488,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,3.18850937571846,0,0,0,0,0,0.140444420131752,0,0,0,0,0,5.09610479413291,0,0,0,0,0.11418387971906,1.29468941823586,0.29688427812965,0,0,0,0,0.23517741427141,0.502666365318702,0,0.144599356919912,1.76922110389975,0.161766849947409,1.76673214768315,0,0,0,0,0.255457055208591,0.359445373517761,0,1.90605340609597,0,0,0,0.173824320192276,0,0,0,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0.268273401399619,0.700592054203017,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0.823684239564244,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0,0.390267295715598,0.315270288212382,0.44292937929755,0,0.163863314715738,0,0.723245292907558,6.03165135757089,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0,1.02522528478712,0,0,0.188368457004691,0.136694227721025,0.457556346413045,0,0.559805809294632,0.690999869022119,0,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.632022241256357,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.480781798079875,0.295379054349154,0.302899349844443,0.15241361331,0.504130925684203,0.194915761479505,0.288635524920988,0.584384510907845,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,1.04692622291808,0,0.30246421130683,0,0.16787927191189,0,0.387369970324729,0,0,0,0,0,0.437102012094987,1.66554880907831,5.4668322195253,2.79824751251259,5.20512572841092,1.64537320326887,1.69755860719212,0.0850432901510698,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,1.29228598847722,1.07735616342945,0,0,0,0,0,0,0,0,0,1.67412652294763,3.906676722619,1.0470474879476,0.588231488031014,0,1.94204141212461,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,0.838913030288682,0.725362142011344,0.336093799142464,0.257259436035947,0,1.03134418455488,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,3.18850937571846,0,0,0,0,0,0.140444420131752,0,0,0,0,0,5.09610479413291,0,0,0,0,0.11418387971906,1.29468941823586,0.29688427812965,0,0,0,0,0.23517741427141,0.502666365318702,0,0.144599356919912,1.76922110389975,0.161766849947409,1.76673214768315,0,0,0,0,0.255457055208591,0.359445373517761,0,1.90605340609597,0,0,0,0.173824320192276,0,0,0,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0.268273401399619,0.700592054203017,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0.823684239564244,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0,0.390267295715598,0.315270288212382,0.44292937929755,0,0.163863314715738,0,0.723245292907558,6.03165135757089,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0,1.02522528478712,0,0,0.188368457004691,0.136694227721025,0.457556346413045,0,0.559805809294632,0.690999869022119,0,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.632022241256357,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.480781798079875,0.295379054349154,0.302899349844443,0.15241361331,0.504130925684203,0.194915761479505,0.288635524920988,0.584384510907845,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p4@Sp100 | |short_description=p4@Sp100 | ||
}} | }} |
Revision as of 00:45, 14 November 2012
Short description: | p4@Sp100 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sp100_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENSMUST00000145440_5end |
EntrezGene: | Sp100 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.16e-23 | 6 |
megakaryocyte | 1.16e-23 | 6 |
myeloid lineage restricted progenitor cell | 5.42e-19 | 13 |
common myeloid progenitor | 5.64e-16 | 19 |
megakaryocyte-erythroid progenitor cell | 1.29e-15 | 9 |
myeloid cell | 3.20e-15 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 8.61e-13 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.61e-13 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.61e-13 | 3 |
bone marrow macrophage | 1.82e-09 | 2 |
hematopoietic lineage restricted progenitor cell | 2.49e-09 | 25 |
defensive cell | 2.99e-09 | 7 |
hematopoietic cell | 6.54e-09 | 32 |
hematopoietic oligopotent progenitor cell | 6.54e-09 | 32 |
hematopoietic stem cell | 6.54e-09 | 32 |
hematopoietic multipotent progenitor cell | 6.54e-09 | 32 |
connective tissue cell | 3.37e-07 | 46 |
mesenchymal cell | 3.37e-07 | 46 |
multi-potent skeletal muscle stem cell | 6.17e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.63e-22 | 32 |
bone element | 8.94e-17 | 22 |
skeletal element | 8.94e-17 | 22 |
skeletal system | 8.94e-17 | 22 |
bone marrow | 3.20e-15 | 16 |
hemolymphoid system | 3.27e-08 | 48 |
immune system | 3.27e-08 | 48 |
hematopoietic system | 2.56e-07 | 45 |
blood island | 2.56e-07 | 45 |
connective tissue | 3.37e-07 | 46 |
skeletal muscle tissue | 6.17e-07 | 9 |
striated muscle tissue | 6.17e-07 | 9 |
muscle tissue | 6.17e-07 | 9 |
multilaminar epithelium | 6.17e-07 | 9 |
epithelial vesicle | 6.17e-07 | 9 |
musculature | 6.17e-07 | 9 |
somite | 6.17e-07 | 9 |
myotome | 6.17e-07 | 9 |
presomitic mesoderm | 6.17e-07 | 9 |
presumptive segmental plate | 6.17e-07 | 9 |
dermomyotome | 6.17e-07 | 9 |
trunk paraxial mesoderm | 6.17e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.02e-12 | 3 |
muscle cancer | 3.02e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.