FFCP PHASE1:Mm9::chr12:116685088..116685116,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr12:116685088..116685116,- | |id=chr12:116685088..116685116,- | ||
|ontology_enrichment_celltype=CL:0000553!2.60e-12!6;CL:0000556!2.60e-12!6;CL:0000050!7.52e-08!9;CL:0002027!5.93e-07!3;CL:0002006!5.93e-07!3;CL:0002024!5.93e-07!3 | |ontology_enrichment_celltype=CL:0000553!2.60e-12!6;CL:0000556!2.60e-12!6;CL:0000050!7.52e-08!9;CL:0002027!5.93e-07!3;CL:0002006!5.93e-07!3;CL:0002024!5.93e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.22e-30,6;CL:0000556,2.22e-30,6;CL:0000050,3.83e-20,9;CL:0002027,5.18e-16,3;CL:0002006,5.18e-16,3;CL:0002024,5.18e-16,3;CL:0000839,7.99e-14,13;CL:0000763,3.77e-11,16;CL:0002031,2.42e-09,25;CL:0000049,2.57e-09,19;CL:0000988,3.92e-07,32;CL:0002032,3.92e-07,32;CL:0000037,3.92e-07,32;CL:0000837,3.92e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.03e-09!48;UBERON:0007023!5.54e-09!51;UBERON:0007823!7.98e-09!5;UBERON:0002529!2.85e-07!6;UBERON:0003081!3.36e-07!88;UBERON:0000981!5.66e-07!4;UBERON:0002495!5.66e-07!4;UBERON:0003608!5.66e-07!4;UBERON:0003826!5.66e-07!4;UBERON:0008202!5.66e-07!4;UBERON:0004375!5.66e-07!4;UBERON:0002428!5.66e-07!4;UBERON:0003464!5.66e-07!4;UBERON:0003606!5.66e-07!4;UBERON:0009749!5.66e-07!4;UBERON:0003860!5.66e-07!4;UBERON:0005856!5.66e-07!4;UBERON:0005866!5.66e-07!4;UBERON:0007828!5.66e-07!4;UBERON:0005254!5.66e-07!4;UBERON:0001271!5.66e-07!4;UBERON:0002091!5.66e-07!4;UBERON:0001464!5.66e-07!4;UBERON:0003285!5.66e-07!4;UBERON:0010129!5.66e-07!4;UBERON:0006234!5.66e-07!4;UBERON:0002465!9.11e-07!3;UBERON:0001474!9.86e-07!22;UBERON:0004765!9.86e-07!22;UBERON:0001434!9.86e-07!22 | |ontology_enrichment_uberon=UBERON:0002193!2.03e-09!48;UBERON:0007023!5.54e-09!51;UBERON:0007823!7.98e-09!5;UBERON:0002529!2.85e-07!6;UBERON:0003081!3.36e-07!88;UBERON:0000981!5.66e-07!4;UBERON:0002495!5.66e-07!4;UBERON:0003608!5.66e-07!4;UBERON:0003826!5.66e-07!4;UBERON:0008202!5.66e-07!4;UBERON:0004375!5.66e-07!4;UBERON:0002428!5.66e-07!4;UBERON:0003464!5.66e-07!4;UBERON:0003606!5.66e-07!4;UBERON:0009749!5.66e-07!4;UBERON:0003860!5.66e-07!4;UBERON:0005856!5.66e-07!4;UBERON:0005866!5.66e-07!4;UBERON:0007828!5.66e-07!4;UBERON:0005254!5.66e-07!4;UBERON:0001271!5.66e-07!4;UBERON:0002091!5.66e-07!4;UBERON:0001464!5.66e-07!4;UBERON:0003285!5.66e-07!4;UBERON:0010129!5.66e-07!4;UBERON:0006234!5.66e-07!4;UBERON:0002465!9.11e-07!3;UBERON:0001474!9.86e-07!22;UBERON:0004765!9.86e-07!22;UBERON:0001434!9.86e-07!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.49e-18,48;UBERON:0002405,2.49e-18,48;UBERON:0002465,1.63e-15,3;UBERON:0002106,3.42e-13,6;UBERON:0004457,3.42e-13,6;UBERON:0000042,3.42e-13,6;UBERON:0004854,3.42e-13,6;UBERON:0009034,3.42e-13,6;UBERON:0002095,3.42e-13,6;UBERON:0004782,3.42e-13,6;UBERON:0003281,3.42e-13,6;UBERON:0009664,3.42e-13,6;UBERON:0002296,3.42e-13,6;UBERON:0005602,3.42e-13,6;UBERON:0001179,3.42e-13,6;UBERON:0006293,3.42e-13,6;UBERON:0002390,7.84e-12,45;UBERON:0003061,7.84e-12,45;UBERON:0002371,3.77e-11,16;UBERON:0001474,1.35e-10,22;UBERON:0004765,1.35e-10,22;UBERON:0001434,1.35e-10,22;UBERON:0001962,1.70e-10,2;UBERON:0001961,1.70e-10,2;UBERON:0001744,1.70e-10,2;UBERON:0003887,5.45e-08,10;UBERON:0002204,4.71e-07,32;UBERON:0004923,7.68e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32908547449759,21.6648536107114,16.7894850750755,17.9813434254195,17.9619908023518,7.63901373236454,0,0,0,2.3998863419011,2.52350209173887,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72469551500229,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,36.251303710604,0,0,0,0,0,0,0,0,0.578397427679647,1.76922110389975,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,18.3929079750186,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0.318909537314974,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,12.9861869406368,0,0,1.13021074202815,2.59719032669948,2.74533807847827,0,0.69975726161829,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.194915761479505,0.384847366561318,0.350630706544707,0,0,0,0,0.772758376128762,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32908547449759,21.6648536107114,16.7894850750755,17.9813434254195,17.9619908023518,7.63901373236454,0,0,0,2.3998863419011,2.52350209173887,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72469551500229,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,36.251303710604,0,0,0,0,0,0,0,0,0.578397427679647,1.76922110389975,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,18.3929079750186,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0.318909537314974,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,12.9861869406368,0,0,1.13021074202815,2.59719032669948,2.74533807847827,0,0.69975726161829,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.194915761479505,0.384847366561318,0.350630706544707,0,0,0,0,0.772758376128762,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p1@ENSMUST00000163467 | |short_description=p1@ENSMUST00000163467 | ||
}} | }} |
Revision as of 03:58, 14 November 2012
Short description: | p1@ENSMUST00000163467 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000163467_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -167bp_to_ENSMUST00000163467_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.22e-30 | 6 |
megakaryocyte | 2.22e-30 | 6 |
megakaryocyte-erythroid progenitor cell | 3.83e-20 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 5.18e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.18e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.18e-16 | 3 |
myeloid lineage restricted progenitor cell | 7.99e-14 | 13 |
myeloid cell | 3.77e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 2.42e-09 | 25 |
common myeloid progenitor | 2.57e-09 | 19 |
hematopoietic cell | 3.92e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.92e-07 | 32 |
hematopoietic stem cell | 3.92e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.92e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.49e-18 | 48 |
immune system | 2.49e-18 | 48 |
lymphoid system | 1.63e-15 | 3 |
spleen | 3.42e-13 | 6 |
cavity lining | 3.42e-13 | 6 |
serous membrane | 3.42e-13 | 6 |
gastrointestinal system mesentery | 3.42e-13 | 6 |
stomach region | 3.42e-13 | 6 |
mesentery | 3.42e-13 | 6 |
gastrointestinal system serosa | 3.42e-13 | 6 |
mesentery of stomach | 3.42e-13 | 6 |
gut mesentery | 3.42e-13 | 6 |
dorsal mesentery | 3.42e-13 | 6 |
dorsal mesogastrium | 3.42e-13 | 6 |
peritoneal cavity | 3.42e-13 | 6 |
spleen primordium | 3.42e-13 | 6 |
hematopoietic system | 7.84e-12 | 45 |
blood island | 7.84e-12 | 45 |
bone marrow | 3.77e-11 | 16 |
bone element | 1.35e-10 | 22 |
skeletal element | 1.35e-10 | 22 |
skeletal system | 1.35e-10 | 22 |
gut-associated lymphoid tissue | 1.70e-10 | 2 |
mucosa-associated lymphoid tissue | 1.70e-10 | 2 |
lymphoid tissue | 1.70e-10 | 2 |
intraembryonic coelom | 5.45e-08 | 10 |
musculoskeletal system | 4.71e-07 | 32 |
organ component layer | 7.68e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.