FFCP PHASE1:Mm9::chr19:6363896..6363941,+: Difference between revisions
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|id=chr19:6363896..6363941,+ | |id=chr19:6363896..6363941,+ | ||
|ontology_enrichment_celltype=CL:0000791!5.03e-07!9;CL:0000789!5.03e-07!9;CL:0002420!5.03e-07!9;CL:0002419!5.03e-07!9;CL:0000790!5.03e-07!9 | |ontology_enrichment_celltype=CL:0000791!5.03e-07!9;CL:0000789!5.03e-07!9;CL:0002420!5.03e-07!9;CL:0002419!5.03e-07!9;CL:0000790!5.03e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.03e-07,9;CL:0000789,5.03e-07,9;CL:0002420,5.03e-07,9;CL:0002419,5.03e-07,9;CL:0000790,5.03e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.88e-13!29;UBERON:0002370!3.29e-12!23;UBERON:0000974!3.29e-12!23;UBERON:0004807!3.29e-12!23;UBERON:0005058!3.29e-12!23;UBERON:0003351!3.29e-12!23;UBERON:0009113!3.29e-12!23;UBERON:0003295!3.29e-12!23;UBERON:0009722!3.29e-12!23;UBERON:0005562!3.29e-12!23;UBERON:0007690!3.29e-12!23;UBERON:0003408!2.08e-11!24;UBERON:0006562!2.46e-11!24;UBERON:0001557!2.46e-11!24;UBERON:0001042!2.46e-11!24;UBERON:0008814!2.46e-11!24;UBERON:0009145!2.46e-11!24;UBERON:0002390!1.28e-09!45;UBERON:0003061!1.28e-09!45;UBERON:0000065!4.70e-09!41;UBERON:0001004!1.22e-08!42;UBERON:0002193!1.40e-08!48;UBERON:0000072!3.64e-08!27;UBERON:0005057!8.60e-08!51;UBERON:0001048!6.45e-07!147 | |ontology_enrichment_uberon=UBERON:0004177!2.88e-13!29;UBERON:0002370!3.29e-12!23;UBERON:0000974!3.29e-12!23;UBERON:0004807!3.29e-12!23;UBERON:0005058!3.29e-12!23;UBERON:0003351!3.29e-12!23;UBERON:0009113!3.29e-12!23;UBERON:0003295!3.29e-12!23;UBERON:0009722!3.29e-12!23;UBERON:0005562!3.29e-12!23;UBERON:0007690!3.29e-12!23;UBERON:0003408!2.08e-11!24;UBERON:0006562!2.46e-11!24;UBERON:0001557!2.46e-11!24;UBERON:0001042!2.46e-11!24;UBERON:0008814!2.46e-11!24;UBERON:0009145!2.46e-11!24;UBERON:0002390!1.28e-09!45;UBERON:0003061!1.28e-09!45;UBERON:0000065!4.70e-09!41;UBERON:0001004!1.22e-08!42;UBERON:0002193!1.40e-08!48;UBERON:0000072!3.64e-08!27;UBERON:0005057!8.60e-08!51;UBERON:0001048!6.45e-07!147 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.88e-13,29;UBERON:0005057,2.88e-13,29;UBERON:0002370,3.29e-12,23;UBERON:0000974,3.29e-12,23;UBERON:0004807,3.29e-12,23;UBERON:0005058,3.29e-12,23;UBERON:0003351,3.29e-12,23;UBERON:0009113,3.29e-12,23;UBERON:0003295,3.29e-12,23;UBERON:0009722,3.29e-12,23;UBERON:0005562,3.29e-12,23;UBERON:0007690,3.29e-12,23;UBERON:0003408,2.08e-11,24;UBERON:0006562,2.46e-11,24;UBERON:0001557,2.46e-11,24;UBERON:0001042,2.46e-11,24;UBERON:0008814,2.46e-11,24;UBERON:0009145,2.46e-11,24;UBERON:0000077,4.71e-11,35;UBERON:0000153,4.74e-11,43;UBERON:0007811,1.05e-09,36;UBERON:0002390,1.28e-09,45;UBERON:0003061,1.28e-09,45;UBERON:0000065,4.70e-09,41;UBERON:0001004,1.22e-08,42;UBERON:0002193,1.40e-08,48;UBERON:0002405,1.40e-08,48;UBERON:0000072,3.64e-08,27 | |||
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| ||
|short_description=p1@Sf1 | |short_description=p1@Sf1 | ||
}} | }} |
Revision as of 05:32, 14 November 2012
Short description: | p1@Sf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sf1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000113485, ENSMUST00000113487, ENSMUST00000131083_5end |
EntrezGene: | Sf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.03e-07 | 9 |
alpha-beta T cell | 5.03e-07 | 9 |
immature T cell | 5.03e-07 | 9 |
mature T cell | 5.03e-07 | 9 |
immature alpha-beta T cell | 5.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.88e-13 | 29 |
immune organ | 2.88e-13 | 29 |
thymus | 3.29e-12 | 23 |
neck | 3.29e-12 | 23 |
respiratory system epithelium | 3.29e-12 | 23 |
hemolymphoid system gland | 3.29e-12 | 23 |
pharyngeal epithelium | 3.29e-12 | 23 |
thymic region | 3.29e-12 | 23 |
pharyngeal gland | 3.29e-12 | 23 |
entire pharyngeal arch endoderm | 3.29e-12 | 23 |
thymus primordium | 3.29e-12 | 23 |
early pharyngeal endoderm | 3.29e-12 | 23 |
gland of gut | 2.08e-11 | 24 |
pharynx | 2.46e-11 | 24 |
upper respiratory tract | 2.46e-11 | 24 |
chordate pharynx | 2.46e-11 | 24 |
pharyngeal arch system | 2.46e-11 | 24 |
pharyngeal region of foregut | 2.46e-11 | 24 |
mixed endoderm/mesoderm-derived structure | 4.71e-11 | 35 |
anterior region of body | 4.74e-11 | 43 |
craniocervical region | 1.05e-09 | 36 |
hematopoietic system | 1.28e-09 | 45 |
blood island | 1.28e-09 | 45 |
respiratory tract | 4.70e-09 | 41 |
respiratory system | 1.22e-08 | 42 |
hemolymphoid system | 1.40e-08 | 48 |
immune system | 1.40e-08 | 48 |
segment of respiratory tract | 3.64e-08 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.