FFCP PHASE1:Mm9::chrX:96086252..96086330,-: Difference between revisions
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|id=chrX:96086252..96086330,- | |id=chrX:96086252..96086330,- | ||
|ontology_enrichment_celltype=CL:0000117!3.61e-07!23;CL:0000337!3.61e-07!23 | |ontology_enrichment_celltype=CL:0000117!3.61e-07!23;CL:0000337!3.61e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.37e-07,23;CL:0000337,3.37e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.95e-13!63;UBERON:0004121!2.99e-13!102;UBERON:0000924!2.99e-13!102;UBERON:0006601!2.99e-13!102;UBERON:0003056!1.61e-11!49;UBERON:0002346!3.00e-11!71;UBERON:0003075!3.00e-11!71;UBERON:0007284!3.00e-11!71;UBERON:0000468!3.88e-11!333;UBERON:0001049!1.38e-10!52;UBERON:0005068!1.38e-10!52;UBERON:0006241!1.38e-10!52;UBERON:0007135!1.38e-10!52;UBERON:0001017!8.35e-10!73;UBERON:0005743!8.35e-10!73;UBERON:0000955!1.33e-09!50;UBERON:0006238!1.33e-09!50;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0002616!3.41e-09!49;UBERON:0003080!1.91e-08!40;UBERON:0002780!6.60e-08!39;UBERON:0001890!6.60e-08!39;UBERON:0006240!6.60e-08!39;UBERON:0000922!1.01e-07!328;UBERON:0002020!4.34e-07!34 | |ontology_enrichment_uberon=UBERON:0000033!2.95e-13!63;UBERON:0004121!2.99e-13!102;UBERON:0000924!2.99e-13!102;UBERON:0006601!2.99e-13!102;UBERON:0003056!1.61e-11!49;UBERON:0002346!3.00e-11!71;UBERON:0003075!3.00e-11!71;UBERON:0007284!3.00e-11!71;UBERON:0000468!3.88e-11!333;UBERON:0001049!1.38e-10!52;UBERON:0005068!1.38e-10!52;UBERON:0006241!1.38e-10!52;UBERON:0007135!1.38e-10!52;UBERON:0001017!8.35e-10!73;UBERON:0005743!8.35e-10!73;UBERON:0000955!1.33e-09!50;UBERON:0006238!1.33e-09!50;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0002616!3.41e-09!49;UBERON:0003080!1.91e-08!40;UBERON:0002780!6.60e-08!39;UBERON:0001890!6.60e-08!39;UBERON:0006240!6.60e-08!39;UBERON:0000922!1.01e-07!328;UBERON:0002020!4.34e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.56e-16,73;UBERON:0004121,1.00e-14,95;UBERON:0000924,1.00e-14,95;UBERON:0006601,1.00e-14,95;UBERON:0002346,3.66e-13,64;UBERON:0003075,3.66e-13,64;UBERON:0007284,3.66e-13,64;UBERON:0003056,2.03e-11,49;UBERON:0001049,1.84e-10,52;UBERON:0005068,1.84e-10,52;UBERON:0006241,1.84e-10,52;UBERON:0007135,1.84e-10,52;UBERON:0000073,3.39e-10,54;UBERON:0001017,1.29e-09,73;UBERON:0000955,2.15e-09,47;UBERON:0006238,2.15e-09,47;UBERON:0001016,2.16e-09,75;UBERON:0002616,5.55e-09,46;UBERON:0010314,1.19e-08,92;UBERON:0003080,2.42e-08,40;UBERON:0002780,8.35e-08,39;UBERON:0001890,8.35e-08,39;UBERON:0006240,8.35e-08,39;UBERON:0000922,1.76e-07,320;UBERON:0002020,5.54e-07,34 | |||
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| ||
|short_description=p1@Ophn1 | |short_description=p1@Ophn1 | ||
}} | }} |
Revision as of 05:48, 14 November 2012
Short description: | p1@Ophn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ophn1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000033560, ENSMUST00000142267, ENSMUST00000147805, NM_052976, uc009tuy.1, uc009tuz.1, uc009tvb.1, uc012hmn.1_5end |
EntrezGene: | Ophn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.37e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.37e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.56e-16 | 73 |
ectoderm-derived structure | 1.00e-14 | 95 |
ectoderm | 1.00e-14 | 95 |
presumptive ectoderm | 1.00e-14 | 95 |
neurectoderm | 3.66e-13 | 64 |
neural plate | 3.66e-13 | 64 |
presumptive neural plate | 3.66e-13 | 64 |
pre-chordal neural plate | 2.03e-11 | 49 |
neural tube | 1.84e-10 | 52 |
neural rod | 1.84e-10 | 52 |
future spinal cord | 1.84e-10 | 52 |
neural keel | 1.84e-10 | 52 |
regional part of nervous system | 3.39e-10 | 54 |
central nervous system | 1.29e-09 | 73 |
brain | 2.15e-09 | 47 |
future brain | 2.15e-09 | 47 |
nervous system | 2.16e-09 | 75 |
regional part of brain | 5.55e-09 | 46 |
structure with developmental contribution from neural crest | 1.19e-08 | 92 |
anterior neural tube | 2.42e-08 | 40 |
regional part of forebrain | 8.35e-08 | 39 |
forebrain | 8.35e-08 | 39 |
future forebrain | 8.35e-08 | 39 |
embryo | 1.76e-07 | 320 |
gray matter | 5.54e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.