FFCP PHASE1:Mm9::chr16:91931868..91931877,-: Difference between revisions
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|id=chr16:91931868..91931877,- | |id=chr16:91931868..91931877,- | ||
|ontology_enrichment_celltype=CL:0000117!2.15e-09!23;CL:0000337!2.15e-09!23;CL:0002319!4.25e-07!43;CL:0000221!7.55e-07!44;CL:0000133!7.55e-07!44 | |ontology_enrichment_celltype=CL:0000117!2.15e-09!23;CL:0000337!2.15e-09!23;CL:0002319!4.25e-07!43;CL:0000221!7.55e-07!44;CL:0000133!7.55e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.11e-09,23;CL:0000337,2.11e-09,23;CL:0002319,3.95e-07,43;CL:0000221,7.02e-07,44;CL:0000133,7.02e-07,44;CL:0000540,9.36e-07,33;CL:0000047,9.36e-07,33;CL:0000031,9.36e-07,33;CL:0000404,9.36e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.73e-10!75;UBERON:0001016!1.73e-10!75;UBERON:0002020!1.81e-10!34;UBERON:0001017!2.62e-10!73;UBERON:0005743!2.62e-10!73;UBERON:0001049!6.53e-09!52;UBERON:0005068!6.53e-09!52;UBERON:0006241!6.53e-09!52;UBERON:0007135!6.53e-09!52;UBERON:0002791!1.00e-08!29;UBERON:0003528!1.00e-08!29;UBERON:0001893!1.00e-08!29;UBERON:0002616!4.86e-08!49;UBERON:0000955!6.33e-08!50;UBERON:0006238!6.33e-08!50;UBERON:0000956!1.80e-07!21;UBERON:0001869!1.80e-07!21;UBERON:0000203!1.80e-07!21;UBERON:0007100!5.30e-07!18;UBERON:0000948!5.30e-07!18;UBERON:0005498!5.30e-07!18;UBERON:0004140!5.30e-07!18;UBERON:0009881!5.30e-07!18;UBERON:0004141!5.30e-07!18;UBERON:0003084!5.30e-07!18;UBERON:0007005!5.30e-07!18;UBERON:0004139!5.30e-07!18;UBERON:0004291!5.30e-07!18;UBERON:0000025!5.84e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!1.73e-10!75;UBERON:0001016!1.73e-10!75;UBERON:0002020!1.81e-10!34;UBERON:0001017!2.62e-10!73;UBERON:0005743!2.62e-10!73;UBERON:0001049!6.53e-09!52;UBERON:0005068!6.53e-09!52;UBERON:0006241!6.53e-09!52;UBERON:0007135!6.53e-09!52;UBERON:0002791!1.00e-08!29;UBERON:0003528!1.00e-08!29;UBERON:0001893!1.00e-08!29;UBERON:0002616!4.86e-08!49;UBERON:0000955!6.33e-08!50;UBERON:0006238!6.33e-08!50;UBERON:0000956!1.80e-07!21;UBERON:0001869!1.80e-07!21;UBERON:0000203!1.80e-07!21;UBERON:0007100!5.30e-07!18;UBERON:0000948!5.30e-07!18;UBERON:0005498!5.30e-07!18;UBERON:0004140!5.30e-07!18;UBERON:0009881!5.30e-07!18;UBERON:0004141!5.30e-07!18;UBERON:0003084!5.30e-07!18;UBERON:0007005!5.30e-07!18;UBERON:0004139!5.30e-07!18;UBERON:0004291!5.30e-07!18;UBERON:0000025!5.84e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.70e-10,75;UBERON:0010314,1.70e-10,92;UBERON:0002020,1.78e-10,34;UBERON:0001017,2.58e-10,73;UBERON:0000073,1.21e-09,54;UBERON:0001049,6.90e-09,52;UBERON:0005068,6.90e-09,52;UBERON:0006241,6.90e-09,52;UBERON:0007135,6.90e-09,52;UBERON:0003528,9.90e-09,29;UBERON:0002791,9.90e-09,29;UBERON:0001893,9.90e-09,29;UBERON:0000956,1.78e-07,21;UBERON:0001869,1.78e-07,21;UBERON:0000203,1.78e-07,21;UBERON:0002346,2.11e-07,64;UBERON:0003075,2.11e-07,64;UBERON:0007284,2.11e-07,64;UBERON:0007100,5.24e-07,18;UBERON:0000948,5.24e-07,18;UBERON:0005498,5.24e-07,18;UBERON:0004140,5.24e-07,18;UBERON:0009881,5.24e-07,18;UBERON:0004141,5.24e-07,18;UBERON:0003084,5.24e-07,18;UBERON:0007005,5.24e-07,18;UBERON:0004139,5.24e-07,18;UBERON:0004291,5.24e-07,18;UBERON:0000025,7.09e-07,114;UBERON:0002616,7.83e-07,46;UBERON:0000955,9.90e-07,47;UBERON:0006238,9.90e-07,47 | |||
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| ||
|short_description=p3@Atp5o | |short_description=p3@Atp5o | ||
}} | }} |
Revision as of 06:55, 14 November 2012
Short description: | p3@Atp5o |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atp5o_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_NM_138597, uc007zys.1_5end |
EntrezGene: | Atp5o |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.11e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.11e-09 | 23 |
neural cell | 3.95e-07 | 43 |
ectodermal cell | 7.02e-07 | 44 |
neurectodermal cell | 7.02e-07 | 44 |
neuron | 9.36e-07 | 33 |
neuronal stem cell | 9.36e-07 | 33 |
neuroblast | 9.36e-07 | 33 |
electrically signaling cell | 9.36e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.70e-10 | 75 |
structure with developmental contribution from neural crest | 1.70e-10 | 92 |
gray matter | 1.78e-10 | 34 |
central nervous system | 2.58e-10 | 73 |
regional part of nervous system | 1.21e-09 | 54 |
neural tube | 6.90e-09 | 52 |
neural rod | 6.90e-09 | 52 |
future spinal cord | 6.90e-09 | 52 |
neural keel | 6.90e-09 | 52 |
brain grey matter | 9.90e-09 | 29 |
regional part of telencephalon | 9.90e-09 | 29 |
telencephalon | 9.90e-09 | 29 |
cerebral cortex | 1.78e-07 | 21 |
cerebral hemisphere | 1.78e-07 | 21 |
pallium | 1.78e-07 | 21 |
neurectoderm | 2.11e-07 | 64 |
neural plate | 2.11e-07 | 64 |
presumptive neural plate | 2.11e-07 | 64 |
primary circulatory organ | 5.24e-07 | 18 |
heart | 5.24e-07 | 18 |
primitive heart tube | 5.24e-07 | 18 |
primary heart field | 5.24e-07 | 18 |
anterior lateral plate mesoderm | 5.24e-07 | 18 |
heart tube | 5.24e-07 | 18 |
heart primordium | 5.24e-07 | 18 |
cardiac mesoderm | 5.24e-07 | 18 |
cardiogenic plate | 5.24e-07 | 18 |
heart rudiment | 5.24e-07 | 18 |
tube | 7.09e-07 | 114 |
regional part of brain | 7.83e-07 | 46 |
brain | 9.90e-07 | 47 |
future brain | 9.90e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.