FFCP PHASE1:Mm9::chr8:74763951..74764080,+: Difference between revisions
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|id=chr8:74763951..74764080,+ | |id=chr8:74763951..74764080,+ | ||
|ontology_enrichment_celltype=CL:0002319!6.89e-13!43;CL:0000221!3.69e-12!44;CL:0000133!3.69e-12!44;CL:0000117!1.25e-11!23;CL:0000337!1.25e-11!23;CL:0000055!7.02e-09!50;CL:0000540!2.64e-08!33;CL:0000047!2.64e-08!33;CL:0000031!2.64e-08!33;CL:0000404!2.64e-08!33;CL:0000034!4.57e-08!97;CL:0000723!6.40e-08!91;CL:0000048!6.40e-08!91 | |ontology_enrichment_celltype=CL:0002319!6.89e-13!43;CL:0000221!3.69e-12!44;CL:0000133!3.69e-12!44;CL:0000117!1.25e-11!23;CL:0000337!1.25e-11!23;CL:0000055!7.02e-09!50;CL:0000540!2.64e-08!33;CL:0000047!2.64e-08!33;CL:0000031!2.64e-08!33;CL:0000404!2.64e-08!33;CL:0000034!4.57e-08!97;CL:0000723!6.40e-08!91;CL:0000048!6.40e-08!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.89e-13,43;CL:0000221,3.69e-12,44;CL:0000133,3.69e-12,44;CL:0000117,1.25e-11,23;CL:0000337,1.25e-11,23;CL:0000540,2.64e-08,33;CL:0000047,2.64e-08,33;CL:0000031,2.64e-08,33;CL:0000404,2.64e-08,33;CL:0000034,4.57e-08,97;CL:0000723,6.40e-08,91;CL:0000048,6.40e-08,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.31e-14!75;UBERON:0001016!1.31e-14!75;UBERON:0001017!9.05e-14!73;UBERON:0005743!9.05e-14!73;UBERON:0001049!3.98e-12!52;UBERON:0005068!3.98e-12!52;UBERON:0006241!3.98e-12!52;UBERON:0007135!3.98e-12!52;UBERON:0002020!2.03e-10!34;UBERON:0002616!1.18e-09!49;UBERON:0000955!1.81e-09!50;UBERON:0006238!1.81e-09!50;UBERON:0002346!6.12e-09!71;UBERON:0003075!6.12e-09!71;UBERON:0007284!6.12e-09!71;UBERON:0003080!2.53e-08!40;UBERON:0002780!5.18e-08!39;UBERON:0001890!5.18e-08!39;UBERON:0006240!5.18e-08!39;UBERON:0002791!6.40e-08!29;UBERON:0003528!6.40e-08!29;UBERON:0001893!6.40e-08!29;UBERON:0004121!7.62e-08!102;UBERON:0000924!7.62e-08!102;UBERON:0006601!7.62e-08!102;UBERON:0003056!1.11e-07!49;UBERON:0007811!3.24e-07!86;UBERON:0000033!6.44e-07!63 | |ontology_enrichment_uberon=UBERON:0000073!1.31e-14!75;UBERON:0001016!1.31e-14!75;UBERON:0001017!9.05e-14!73;UBERON:0005743!9.05e-14!73;UBERON:0001049!3.98e-12!52;UBERON:0005068!3.98e-12!52;UBERON:0006241!3.98e-12!52;UBERON:0007135!3.98e-12!52;UBERON:0002020!2.03e-10!34;UBERON:0002616!1.18e-09!49;UBERON:0000955!1.81e-09!50;UBERON:0006238!1.81e-09!50;UBERON:0002346!6.12e-09!71;UBERON:0003075!6.12e-09!71;UBERON:0007284!6.12e-09!71;UBERON:0003080!2.53e-08!40;UBERON:0002780!5.18e-08!39;UBERON:0001890!5.18e-08!39;UBERON:0006240!5.18e-08!39;UBERON:0002791!6.40e-08!29;UBERON:0003528!6.40e-08!29;UBERON:0001893!6.40e-08!29;UBERON:0004121!7.62e-08!102;UBERON:0000924!7.62e-08!102;UBERON:0006601!7.62e-08!102;UBERON:0003056!1.11e-07!49;UBERON:0007811!3.24e-07!86;UBERON:0000033!6.44e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.31e-14,75;UBERON:0001017,9.05e-14,73;UBERON:0001049,3.98e-12,52;UBERON:0005068,3.98e-12,52;UBERON:0006241,3.98e-12,52;UBERON:0007135,3.98e-12,52;UBERON:0000073,4.42e-12,54;UBERON:0002346,4.56e-11,64;UBERON:0003075,4.56e-11,64;UBERON:0007284,4.56e-11,64;UBERON:0002020,2.03e-10,34;UBERON:0002616,1.90e-09,46;UBERON:0004121,2.52e-09,95;UBERON:0000924,2.52e-09,95;UBERON:0006601,2.52e-09,95;UBERON:0000955,2.97e-09,47;UBERON:0006238,2.97e-09,47;UBERON:0003080,2.53e-08,40;UBERON:0010314,3.32e-08,92;UBERON:0002780,5.18e-08,39;UBERON:0001890,5.18e-08,39;UBERON:0006240,5.18e-08,39;UBERON:0003528,6.40e-08,29;UBERON:0002791,6.40e-08,29;UBERON:0001893,6.40e-08,29;UBERON:0003056,1.11e-07,49;UBERON:0010371,5.92e-07,73 | |||
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| ||
|short_description=p1@Ap1m1 | |short_description=p1@Ap1m1 | ||
}} | }} |
Revision as of 07:36, 14 November 2012
Short description: | p1@Ap1m1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ap1m1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1410 |
Association with transcript: | 0bp_to_ENSMUST00000145213, NM_007456, uc009mfp.1_5end |
EntrezGene: | Ap1m1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.89e-13 | 43 |
ectodermal cell | 3.69e-12 | 44 |
neurectodermal cell | 3.69e-12 | 44 |
CNS neuron (sensu Vertebrata) | 1.25e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.25e-11 | 23 |
neuron | 2.64e-08 | 33 |
neuronal stem cell | 2.64e-08 | 33 |
neuroblast | 2.64e-08 | 33 |
electrically signaling cell | 2.64e-08 | 33 |
stem cell | 4.57e-08 | 97 |
somatic stem cell | 6.40e-08 | 91 |
multi fate stem cell | 6.40e-08 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.31e-14 | 75 |
central nervous system | 9.05e-14 | 73 |
neural tube | 3.98e-12 | 52 |
neural rod | 3.98e-12 | 52 |
future spinal cord | 3.98e-12 | 52 |
neural keel | 3.98e-12 | 52 |
regional part of nervous system | 4.42e-12 | 54 |
neurectoderm | 4.56e-11 | 64 |
neural plate | 4.56e-11 | 64 |
presumptive neural plate | 4.56e-11 | 64 |
gray matter | 2.03e-10 | 34 |
regional part of brain | 1.90e-09 | 46 |
ectoderm-derived structure | 2.52e-09 | 95 |
ectoderm | 2.52e-09 | 95 |
presumptive ectoderm | 2.52e-09 | 95 |
brain | 2.97e-09 | 47 |
future brain | 2.97e-09 | 47 |
anterior neural tube | 2.53e-08 | 40 |
structure with developmental contribution from neural crest | 3.32e-08 | 92 |
regional part of forebrain | 5.18e-08 | 39 |
forebrain | 5.18e-08 | 39 |
future forebrain | 5.18e-08 | 39 |
brain grey matter | 6.40e-08 | 29 |
regional part of telencephalon | 6.40e-08 | 29 |
telencephalon | 6.40e-08 | 29 |
pre-chordal neural plate | 1.11e-07 | 49 |
ecto-epithelium | 5.92e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.