FFCP PHASE1:Mm9::chr14:70477182..70477191,+: Difference between revisions
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|id=chr14:70477182..70477191,+ | |id=chr14:70477182..70477191,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.19e-08!9;CL:0000789!1.19e-08!9;CL:0002420!1.19e-08!9;CL:0002419!1.19e-08!9;CL:0000790!1.19e-08!9;CL:0000838!3.11e-08!12;CL:0000542!1.75e-07!13;CL:0000051!1.75e-07!13;CL:0000893!2.76e-07!6;CL:0002489!2.76e-07!6;CL:0000898!2.76e-07!6;CL:0000809!2.76e-07!6;CL:0000810!2.76e-07!6;CL:0000895!2.76e-07!6;CL:0000808!2.76e-07!6;CL:0000894!2.76e-07!6;CL:0000806!2.76e-07!6;CL:0000807!2.76e-07!6;CL:0000805!2.76e-07!6;CL:0002425!2.76e-07!6;CL:0002436!2.76e-07!6;CL:0002427!2.76e-07!6;CL:0002428!2.76e-07!6;CL:0002429!2.76e-07!6;CL:0002433!2.76e-07!6;CL:0002431!2.76e-07!6;CL:0002432!2.76e-07!6;CL:0000624!2.98e-07!8;CL:0000084!7.27e-07!11;CL:0000827!7.27e-07!11 | |ontology_enrichment_celltype=CL:0000791!1.19e-08!9;CL:0000789!1.19e-08!9;CL:0002420!1.19e-08!9;CL:0002419!1.19e-08!9;CL:0000790!1.19e-08!9;CL:0000838!3.11e-08!12;CL:0000542!1.75e-07!13;CL:0000051!1.75e-07!13;CL:0000893!2.76e-07!6;CL:0002489!2.76e-07!6;CL:0000898!2.76e-07!6;CL:0000809!2.76e-07!6;CL:0000810!2.76e-07!6;CL:0000895!2.76e-07!6;CL:0000808!2.76e-07!6;CL:0000894!2.76e-07!6;CL:0000806!2.76e-07!6;CL:0000807!2.76e-07!6;CL:0000805!2.76e-07!6;CL:0002425!2.76e-07!6;CL:0002436!2.76e-07!6;CL:0002427!2.76e-07!6;CL:0002428!2.76e-07!6;CL:0002429!2.76e-07!6;CL:0002433!2.76e-07!6;CL:0002431!2.76e-07!6;CL:0002432!2.76e-07!6;CL:0000624!2.98e-07!8;CL:0000084!7.27e-07!11;CL:0000827!7.27e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.12e-07,6;CL:0002489,1.12e-07,6;CL:0000898,1.12e-07,6;CL:0000809,1.12e-07,6;CL:0000810,1.12e-07,6;CL:0000895,1.12e-07,6;CL:0000808,1.12e-07,6;CL:0000894,1.12e-07,6;CL:0000806,1.12e-07,6;CL:0000807,1.12e-07,6;CL:0000805,1.12e-07,6;CL:0002425,1.12e-07,6;CL:0002436,1.12e-07,6;CL:0002427,1.12e-07,6;CL:0002428,1.12e-07,6;CL:0002429,1.12e-07,6;CL:0002433,1.12e-07,6;CL:0002431,1.12e-07,6;CL:0002432,1.12e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.52e-09!10;UBERON:0000411!3.52e-09!10;UBERON:0001950!3.52e-09!10;UBERON:0000014!3.79e-09!5;UBERON:0001003!3.79e-09!5;UBERON:0002097!3.79e-09!5;UBERON:0002199!3.79e-09!5;UBERON:0007029!3.79e-09!5;UBERON:0007376!3.79e-09!5;UBERON:0002416!3.79e-09!5;UBERON:0007383!3.79e-09!5;UBERON:0002619!1.20e-07!17;UBERON:0000956!2.49e-07!21;UBERON:0001869!2.49e-07!21;UBERON:0000203!2.49e-07!21 | |ontology_enrichment_uberon=UBERON:0002021!3.52e-09!10;UBERON:0000411!3.52e-09!10;UBERON:0001950!3.52e-09!10;UBERON:0000014!3.79e-09!5;UBERON:0001003!3.79e-09!5;UBERON:0002097!3.79e-09!5;UBERON:0002199!3.79e-09!5;UBERON:0007029!3.79e-09!5;UBERON:0007376!3.79e-09!5;UBERON:0002416!3.79e-09!5;UBERON:0007383!3.79e-09!5;UBERON:0002619!1.20e-07!17;UBERON:0000956!2.49e-07!21;UBERON:0001869!2.49e-07!21;UBERON:0000203!2.49e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.21e-16,10;UBERON:0000411,7.21e-16,10;UBERON:0001950,7.21e-16,10;UBERON:0003528,4.88e-12,29;UBERON:0002791,4.88e-12,29;UBERON:0001893,4.88e-12,29;UBERON:0000956,1.15e-11,21;UBERON:0001869,1.15e-11,21;UBERON:0000203,1.15e-11,21;UBERON:0001851,1.12e-10,1;UBERON:0005889,1.12e-10,1;UBERON:0002020,2.91e-10,34;UBERON:0002619,1.69e-09,17;UBERON:0002780,6.13e-09,39;UBERON:0001890,6.13e-09,39;UBERON:0006240,6.13e-09,39;UBERON:0003080,1.03e-08,40;UBERON:0002616,1.45e-07,46;UBERON:0000955,2.12e-07,47;UBERON:0006238,2.12e-07,47;UBERON:0003056,4.30e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,7.74337971834167,11.2350972634557,0.171217968225505,0.0797721589953364,0,0.174840804837995,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,1.83000241127451,0,1.04294592115366,1.02286182932132,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.484393280087717,0.603129249281559,0.477489376012546,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0,1.37016503954128,0,0.675022500231806,0,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,7.74337971834167,11.2350972634557,0.171217968225505,0.0797721589953364,0,0.174840804837995,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,1.83000241127451,0,1.04294592115366,1.02286182932132,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.484393280087717,0.603129249281559,0.477489376012546,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0,1.37016503954128,0,0.675022500231806,0,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p5@Egr3 | |short_description=p5@Egr3 | ||
}} | }} |
Revision as of 08:03, 14 November 2012
Short description: | p5@Egr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Egr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -60bp_to_ENSMUST00000035908, NM_018781, uc007unb.1, uc007unc.1_5end |
EntrezGene: | Egr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 1.12e-07 | 6 |
double negative thymocyte | 1.12e-07 | 6 |
naive T cell | 1.12e-07 | 6 |
double-positive, alpha-beta thymocyte | 1.12e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 1.12e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.12e-07 | 6 |
DN4 thymocyte | 1.12e-07 | 6 |
DN1 thymic pro-T cell | 1.12e-07 | 6 |
DN2 thymocyte | 1.12e-07 | 6 |
DN3 thymocyte | 1.12e-07 | 6 |
immature single positive thymocyte | 1.12e-07 | 6 |
early T lineage precursor | 1.12e-07 | 6 |
mature CD4 single-positive thymocyte | 1.12e-07 | 6 |
resting double-positive thymocyte | 1.12e-07 | 6 |
double-positive blast | 1.12e-07 | 6 |
CD69-positive double-positive thymocyte | 1.12e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.12e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.12e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.12e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 7.21e-16 | 10 |
visual cortex | 7.21e-16 | 10 |
neocortex | 7.21e-16 | 10 |
brain grey matter | 4.88e-12 | 29 |
regional part of telencephalon | 4.88e-12 | 29 |
telencephalon | 4.88e-12 | 29 |
cerebral cortex | 1.15e-11 | 21 |
cerebral hemisphere | 1.15e-11 | 21 |
pallium | 1.15e-11 | 21 |
cortex | 1.12e-10 | 1 |
zygote cortex | 1.12e-10 | 1 |
gray matter | 2.91e-10 | 34 |
regional part of cerebral cortex | 1.69e-09 | 17 |
regional part of forebrain | 6.13e-09 | 39 |
forebrain | 6.13e-09 | 39 |
future forebrain | 6.13e-09 | 39 |
anterior neural tube | 1.03e-08 | 40 |
regional part of brain | 1.45e-07 | 46 |
brain | 2.12e-07 | 47 |
future brain | 2.12e-07 | 47 |
pre-chordal neural plate | 4.30e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.