FFCP PHASE1:Mm9::chr4:133181902..133181924,+: Difference between revisions
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|id=chr4:133181902..133181924,+ | |id=chr4:133181902..133181924,+ | ||
|ontology_enrichment_celltype=CL:0000838!9.88e-21!12;CL:0000542!6.03e-19!13;CL:0000051!6.03e-19!13;CL:0000791!6.83e-19!9;CL:0000789!6.83e-19!9;CL:0002420!6.83e-19!9;CL:0002419!6.83e-19!9;CL:0000790!6.83e-19!9;CL:0000084!1.54e-18!11;CL:0000827!1.54e-18!11;CL:0000624!9.78e-17!8;CL:0000738!6.55e-14!17;CL:0002087!6.55e-14!17;CL:0000893!1.35e-12!6;CL:0002489!1.35e-12!6;CL:0000898!1.35e-12!6;CL:0000809!1.35e-12!6;CL:0000810!1.35e-12!6;CL:0000895!1.35e-12!6;CL:0000808!1.35e-12!6;CL:0000894!1.35e-12!6;CL:0000806!1.35e-12!6;CL:0000807!1.35e-12!6;CL:0000805!1.35e-12!6;CL:0002425!1.35e-12!6;CL:0002436!1.35e-12!6;CL:0002427!1.35e-12!6;CL:0002428!1.35e-12!6;CL:0002429!1.35e-12!6;CL:0002433!1.35e-12!6;CL:0002431!1.35e-12!6;CL:0002432!1.35e-12!6;CL:0000988!3.69e-12!32;CL:0002032!3.69e-12!32;CL:0000037!3.69e-12!32;CL:0000566!3.69e-12!32;CL:0000837!3.69e-12!32;CL:0002031!2.69e-10!25;CL:0002320!1.20e-08!46;CL:0000134!1.20e-08!46;CL:0000219!7.76e-07!54 | |ontology_enrichment_celltype=CL:0000838!9.88e-21!12;CL:0000542!6.03e-19!13;CL:0000051!6.03e-19!13;CL:0000791!6.83e-19!9;CL:0000789!6.83e-19!9;CL:0002420!6.83e-19!9;CL:0002419!6.83e-19!9;CL:0000790!6.83e-19!9;CL:0000084!1.54e-18!11;CL:0000827!1.54e-18!11;CL:0000624!9.78e-17!8;CL:0000738!6.55e-14!17;CL:0002087!6.55e-14!17;CL:0000893!1.35e-12!6;CL:0002489!1.35e-12!6;CL:0000898!1.35e-12!6;CL:0000809!1.35e-12!6;CL:0000810!1.35e-12!6;CL:0000895!1.35e-12!6;CL:0000808!1.35e-12!6;CL:0000894!1.35e-12!6;CL:0000806!1.35e-12!6;CL:0000807!1.35e-12!6;CL:0000805!1.35e-12!6;CL:0002425!1.35e-12!6;CL:0002436!1.35e-12!6;CL:0002427!1.35e-12!6;CL:0002428!1.35e-12!6;CL:0002429!1.35e-12!6;CL:0002433!1.35e-12!6;CL:0002431!1.35e-12!6;CL:0002432!1.35e-12!6;CL:0000988!3.69e-12!32;CL:0002032!3.69e-12!32;CL:0000037!3.69e-12!32;CL:0000566!3.69e-12!32;CL:0000837!3.69e-12!32;CL:0002031!2.69e-10!25;CL:0002320!1.20e-08!46;CL:0000134!1.20e-08!46;CL:0000219!7.76e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.74e-11,1;CL:0000236,5.74e-11,1;CL:0000826,5.74e-11,1;CL:0000625,1.12e-10,1;CL:0000355,1.66e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.15e-08!3;DOID:4045!2.15e-08!3 | |ontology_enrichment_disease=DOID:0060100!2.15e-08!3;DOID:4045!2.15e-08!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.54e-30,3;DOID:4045,4.54e-30,3;DOID:0050686,2.00e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!7.67e-13!23;UBERON:0000974!7.67e-13!23;UBERON:0004807!7.67e-13!23;UBERON:0005058!7.67e-13!23;UBERON:0003351!7.67e-13!23;UBERON:0009113!7.67e-13!23;UBERON:0003295!7.67e-13!23;UBERON:0009722!7.67e-13!23;UBERON:0005562!7.67e-13!23;UBERON:0007690!7.67e-13!23;UBERON:0000072!2.51e-12!27;UBERON:0006562!3.47e-12!24;UBERON:0003408!3.47e-12!24;UBERON:0001557!3.47e-12!24;UBERON:0001042!3.47e-12!24;UBERON:0008814!3.47e-12!24;UBERON:0009145!3.47e-12!24;UBERON:0004177!1.35e-09!29;UBERON:0000063!8.43e-09!35;UBERON:0002384!1.20e-08!46;UBERON:0000490!1.66e-07!66;UBERON:0002390!3.28e-07!45;UBERON:0003061!3.28e-07!45;UBERON:0000065!4.47e-07!41;UBERON:0005057!5.31e-07!51;UBERON:0001004!7.73e-07!42 | |ontology_enrichment_uberon=UBERON:0002370!7.67e-13!23;UBERON:0000974!7.67e-13!23;UBERON:0004807!7.67e-13!23;UBERON:0005058!7.67e-13!23;UBERON:0003351!7.67e-13!23;UBERON:0009113!7.67e-13!23;UBERON:0003295!7.67e-13!23;UBERON:0009722!7.67e-13!23;UBERON:0005562!7.67e-13!23;UBERON:0007690!7.67e-13!23;UBERON:0000072!2.51e-12!27;UBERON:0006562!3.47e-12!24;UBERON:0003408!3.47e-12!24;UBERON:0001557!3.47e-12!24;UBERON:0001042!3.47e-12!24;UBERON:0008814!3.47e-12!24;UBERON:0009145!3.47e-12!24;UBERON:0004177!1.35e-09!29;UBERON:0000063!8.43e-09!35;UBERON:0002384!1.20e-08!46;UBERON:0000490!1.66e-07!66;UBERON:0002390!3.28e-07!45;UBERON:0003061!3.28e-07!45;UBERON:0000065!4.47e-07!41;UBERON:0005057!5.31e-07!51;UBERON:0001004!7.73e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.66e-10,9;UBERON:0002036,1.66e-10,9;UBERON:0002385,1.66e-10,9;UBERON:0000486,1.66e-10,9;UBERON:0007503,1.66e-10,9;UBERON:0001015,1.66e-10,9;UBERON:0002329,1.66e-10,9;UBERON:0003082,1.66e-10,9;UBERON:0003059,1.66e-10,9;UBERON:0007282,1.66e-10,9;UBERON:0004290,1.66e-10,9;UBERON:0009618,1.66e-10,9;UBERON:0000383,1.62e-09,10;UBERON:0007524,1.05e-08,11;UBERON:0003077,1.05e-08,11;UBERON:0007285,1.05e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,0.422366166455,0.70219357896598,0.171217968225505,0.159544317990673,0.684802919724823,0.611942816932982,0,0,0,0.157731082679119,0,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,3.76678467663217,3.906676722619,3.14114246384279,9.41170380849623,2.04913645487534,4.85510353031154,0,0,0,0,0,0,0,0,0,2.18117387875057,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.849892149969277,1.11961161858926,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.102710957164827,0,0,0,0,0,0.302899349844443,0,0.100826185136841,0,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.903863264091034,0.422366166455,0.70219357896598,0.171217968225505,0.159544317990673,0.684802919724823,0.611942816932982,0,0,0,0.157731082679119,0,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,3.76678467663217,3.906676722619,3.14114246384279,9.41170380849623,2.04913645487534,4.85510353031154,0,0,0,0,0,0,0,0,0,2.18117387875057,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.849892149969277,1.11961161858926,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.102710957164827,0,0,0,0,0,0.302899349844443,0,0.100826185136841,0,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr4:133181902..133181924,+ | |short_description=p@chr4:133181902..133181924,+ | ||
}} | }} |
Revision as of 11:17, 14 November 2012
Short description: | p@chr4:133181902..133181924, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:133181902..133181924, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.74e-11 | 1 |
B cell | 5.74e-11 | 1 |
pro-B cell | 5.74e-11 | 1 |
CD8-positive, alpha-beta T cell | 1.12e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.66e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.66e-10 | 9 |
striated muscle tissue | 1.66e-10 | 9 |
muscle tissue | 1.66e-10 | 9 |
multilaminar epithelium | 1.66e-10 | 9 |
epithelial vesicle | 1.66e-10 | 9 |
musculature | 1.66e-10 | 9 |
somite | 1.66e-10 | 9 |
myotome | 1.66e-10 | 9 |
presomitic mesoderm | 1.66e-10 | 9 |
presumptive segmental plate | 1.66e-10 | 9 |
dermomyotome | 1.66e-10 | 9 |
trunk paraxial mesoderm | 1.66e-10 | 9 |
musculature of body | 1.62e-09 | 10 |
dense mesenchyme tissue | 1.05e-08 | 11 |
paraxial mesoderm | 1.05e-08 | 11 |
presumptive paraxial mesoderm | 1.05e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.54e-30 | 3 |
muscle cancer | 4.54e-30 | 3 |
organ system cancer | 2.00e-15 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.