FFCP PHASE1:Mm9::chr13:89367072..89367078,+: Difference between revisions
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|id=chr13:89367072..89367078,+ | |id=chr13:89367072..89367078,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.77e-16!75;UBERON:0001016!6.77e-16!75;UBERON:0002346!2.39e-15!71;UBERON:0003075!2.39e-15!71;UBERON:0007284!2.39e-15!71;UBERON:0001017!3.09e-15!73;UBERON:0005743!3.09e-15!73;UBERON:0000033!3.88e-15!63;UBERON:0003056!4.35e-15!49;UBERON:0000955!2.62e-14!50;UBERON:0006238!2.62e-14!50;UBERON:0001049!2.97e-14!52;UBERON:0005068!2.97e-14!52;UBERON:0006241!2.97e-14!52;UBERON:0007135!2.97e-14!52;UBERON:0002616!1.46e-13!49;UBERON:0004121!1.02e-12!102;UBERON:0000924!1.02e-12!102;UBERON:0006601!1.02e-12!102;UBERON:0003080!2.89e-12!40;UBERON:0002780!1.45e-11!39;UBERON:0001890!1.45e-11!39;UBERON:0006240!1.45e-11!39;UBERON:0002020!1.79e-09!34;UBERON:0002791!1.27e-08!29;UBERON:0003528!1.27e-08!29;UBERON:0001893!1.27e-08!29;UBERON:0000153!1.72e-07!94;UBERON:0007811!3.10e-07!86;UBERON:0000956!9.17e-07!21;UBERON:0001869!9.17e-07!21;UBERON:0000203!9.17e-07!21 | |ontology_enrichment_uberon=UBERON:0000073!6.77e-16!75;UBERON:0001016!6.77e-16!75;UBERON:0002346!2.39e-15!71;UBERON:0003075!2.39e-15!71;UBERON:0007284!2.39e-15!71;UBERON:0001017!3.09e-15!73;UBERON:0005743!3.09e-15!73;UBERON:0000033!3.88e-15!63;UBERON:0003056!4.35e-15!49;UBERON:0000955!2.62e-14!50;UBERON:0006238!2.62e-14!50;UBERON:0001049!2.97e-14!52;UBERON:0005068!2.97e-14!52;UBERON:0006241!2.97e-14!52;UBERON:0007135!2.97e-14!52;UBERON:0002616!1.46e-13!49;UBERON:0004121!1.02e-12!102;UBERON:0000924!1.02e-12!102;UBERON:0006601!1.02e-12!102;UBERON:0003080!2.89e-12!40;UBERON:0002780!1.45e-11!39;UBERON:0001890!1.45e-11!39;UBERON:0006240!1.45e-11!39;UBERON:0002020!1.79e-09!34;UBERON:0002791!1.27e-08!29;UBERON:0003528!1.27e-08!29;UBERON:0001893!1.27e-08!29;UBERON:0000153!1.72e-07!94;UBERON:0007811!3.10e-07!86;UBERON:0000956!9.17e-07!21;UBERON:0001869!9.17e-07!21;UBERON:0000203!9.17e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.22e-30,10;UBERON:0000411,2.22e-30,10;UBERON:0001950,2.22e-30,10;UBERON:0002619,1.07e-17,17;UBERON:0001017,1.24e-15,73;UBERON:0000073,1.31e-15,54;UBERON:0001016,3.51e-15,75;UBERON:0002020,2.39e-14,34;UBERON:0000956,3.10e-14,21;UBERON:0001869,3.10e-14,21;UBERON:0000203,3.10e-14,21;UBERON:0001049,1.54e-13,52;UBERON:0005068,1.54e-13,52;UBERON:0006241,1.54e-13,52;UBERON:0007135,1.54e-13,52;UBERON:0003528,2.56e-13,29;UBERON:0002791,2.56e-13,29;UBERON:0001893,2.56e-13,29;UBERON:0002346,6.28e-13,64;UBERON:0003075,6.28e-13,64;UBERON:0007284,6.28e-13,64;UBERON:0002616,1.32e-12,46;UBERON:0000955,2.59e-12,47;UBERON:0006238,2.59e-12,47;UBERON:0002780,3.11e-12,39;UBERON:0001890,3.11e-12,39;UBERON:0006240,3.11e-12,39;UBERON:0003080,6.65e-12,40;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0010371,3.62e-11,73;UBERON:0003056,1.54e-09,49;UBERON:0010314,1.43e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,0,0,0,0.191690942036473,0,0,0.766124028511126,1.38245879930619,0.131886287730194,0,0.52091337055676,0.558365998002762,0,2.29197371665215,2.35702868378934,0.711858403995515,0.372798891650601,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0.748953197024114,0.457500602818626,0.125654352112864,0.521472960576829,0.511430914660661,0.83115217823824,1.1356888414743,0,0.124406970610093,0,0.210441855886474,0.390361328888111,0,0.180062129805349,0.452114453507145,0.272145996605311,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0.928946687441754,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0.472905432318573,0.8858587585951,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.80275294993896,1.05490517932983,0,0,0,1.17131623288992,0.430846795465598,0,0.222798674082394,0,0.404810701674894,1.46127928955656,0,0.963963949265421,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,2.23409137046794,1.37016503954128,1.5107877947794,0,0,1.35942722695261,2.07104124700728,0.103787347584177,0,0.512200817262403,0,0.419226325255965,0.367687016900028,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.34461281373368,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.354951612318675,0.476872379894642,0,0.188218760830661,0.338458431566706,0.548783918618318,0,0.271608227691724,0,0,0.394017929502254,0.818462086339379,0.154936841185966,0,0,0.233931608445408,0,0,0.220591419119515,0 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| ||
|short_description=p@chr13:89367072..89367078,+ | |short_description=p@chr13:89367072..89367078,+ | ||
}} | }} |
Revision as of 11:27, 14 November 2012
Short description: | p@chr13:89367072..89367078, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:89367072..89367078, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.22e-30 | 10 |
visual cortex | 2.22e-30 | 10 |
neocortex | 2.22e-30 | 10 |
regional part of cerebral cortex | 1.07e-17 | 17 |
central nervous system | 1.24e-15 | 73 |
regional part of nervous system | 1.31e-15 | 54 |
nervous system | 3.51e-15 | 75 |
gray matter | 2.39e-14 | 34 |
cerebral cortex | 3.10e-14 | 21 |
cerebral hemisphere | 3.10e-14 | 21 |
pallium | 3.10e-14 | 21 |
neural tube | 1.54e-13 | 52 |
neural rod | 1.54e-13 | 52 |
future spinal cord | 1.54e-13 | 52 |
neural keel | 1.54e-13 | 52 |
brain grey matter | 2.56e-13 | 29 |
regional part of telencephalon | 2.56e-13 | 29 |
telencephalon | 2.56e-13 | 29 |
neurectoderm | 6.28e-13 | 64 |
neural plate | 6.28e-13 | 64 |
presumptive neural plate | 6.28e-13 | 64 |
regional part of brain | 1.32e-12 | 46 |
brain | 2.59e-12 | 47 |
future brain | 2.59e-12 | 47 |
regional part of forebrain | 3.11e-12 | 39 |
forebrain | 3.11e-12 | 39 |
future forebrain | 3.11e-12 | 39 |
anterior neural tube | 6.65e-12 | 40 |
ectoderm-derived structure | 1.10e-11 | 95 |
ectoderm | 1.10e-11 | 95 |
presumptive ectoderm | 1.10e-11 | 95 |
ecto-epithelium | 3.62e-11 | 73 |
pre-chordal neural plate | 1.54e-09 | 49 |
structure with developmental contribution from neural crest | 1.43e-08 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.