FFCP PHASE1:Mm9::chr19:44355454..44355460,+: Difference between revisions
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|id=chr19:44355454..44355460,+ | |id=chr19:44355454..44355460,+ | ||
|ontology_enrichment_celltype=CL:0000838!9.74e-16!12;CL:0000542!2.44e-14!13;CL:0000051!2.44e-14!13;CL:0000084!3.92e-14!11;CL:0000827!3.92e-14!11;CL:0000738!1.15e-12!17;CL:0002087!1.15e-12!17;CL:0000988!2.95e-11!32;CL:0002032!2.95e-11!32;CL:0000037!2.95e-11!32;CL:0000566!2.95e-11!32;CL:0000837!2.95e-11!32;CL:0000791!1.17e-10!9;CL:0000789!1.17e-10!9;CL:0002420!1.17e-10!9;CL:0002419!1.17e-10!9;CL:0000790!1.17e-10!9;CL:0002320!7.51e-09!46;CL:0000134!7.51e-09!46;CL:0000624!7.92e-09!8;CL:0002031!9.15e-08!25;CL:0000219!6.54e-07!54 | |ontology_enrichment_celltype=CL:0000838!9.74e-16!12;CL:0000542!2.44e-14!13;CL:0000051!2.44e-14!13;CL:0000084!3.92e-14!11;CL:0000827!3.92e-14!11;CL:0000738!1.15e-12!17;CL:0002087!1.15e-12!17;CL:0000988!2.95e-11!32;CL:0002032!2.95e-11!32;CL:0000037!2.95e-11!32;CL:0000566!2.95e-11!32;CL:0000837!2.95e-11!32;CL:0000791!1.17e-10!9;CL:0000789!1.17e-10!9;CL:0002420!1.17e-10!9;CL:0002419!1.17e-10!9;CL:0000790!1.17e-10!9;CL:0002320!7.51e-09!46;CL:0000134!7.51e-09!46;CL:0000624!7.92e-09!8;CL:0002031!9.15e-08!25;CL:0000219!6.54e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.23e-24,11;CL:0000827,4.23e-24,11;CL:0000838,4.39e-22,12;CL:0000791,1.15e-20,9;CL:0000789,1.15e-20,9;CL:0002420,1.15e-20,9;CL:0002419,1.15e-20,9;CL:0000790,1.15e-20,9;CL:0000542,2.23e-20,13;CL:0000051,2.23e-20,13;CL:0000738,1.50e-15,17;CL:0002087,1.50e-15,17;CL:0000624,5.05e-15,8;CL:0000988,2.32e-14,32;CL:0002032,2.32e-14,32;CL:0000037,2.32e-14,32;CL:0000837,2.32e-14,32;CL:0002031,1.66e-10,25;CL:0002320,8.41e-10,46;CL:0000134,8.41e-10,46;CL:0000625,4.39e-09,1;CL:0000815,1.05e-08,1;CL:0000792,1.05e-08,1;CL:0000219,3.00e-08,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.86e-22!23;UBERON:0000974!2.86e-22!23;UBERON:0004807!2.86e-22!23;UBERON:0005058!2.86e-22!23;UBERON:0003351!2.86e-22!23;UBERON:0009113!2.86e-22!23;UBERON:0003295!2.86e-22!23;UBERON:0009722!2.86e-22!23;UBERON:0005562!2.86e-22!23;UBERON:0007690!2.86e-22!23;UBERON:0006562!3.84e-21!24;UBERON:0003408!3.84e-21!24;UBERON:0001557!3.84e-21!24;UBERON:0001042!3.84e-21!24;UBERON:0008814!3.84e-21!24;UBERON:0009145!3.84e-21!24;UBERON:0004177!1.20e-18!29;UBERON:0000072!2.91e-18!27;UBERON:0002390!4.70e-15!45;UBERON:0003061!4.70e-15!45;UBERON:0000063!1.54e-14!35;UBERON:0002193!9.38e-14!48;UBERON:0000065!1.88e-10!41;UBERON:0001004!4.25e-10!42;UBERON:0005057!1.06e-09!51;UBERON:0002384!7.51e-09!46;UBERON:0002405!1.16e-08!70;UBERON:0003081!4.78e-08!88;UBERON:0003929!1.11e-07!55 | |ontology_enrichment_uberon=UBERON:0002370!2.86e-22!23;UBERON:0000974!2.86e-22!23;UBERON:0004807!2.86e-22!23;UBERON:0005058!2.86e-22!23;UBERON:0003351!2.86e-22!23;UBERON:0009113!2.86e-22!23;UBERON:0003295!2.86e-22!23;UBERON:0009722!2.86e-22!23;UBERON:0005562!2.86e-22!23;UBERON:0007690!2.86e-22!23;UBERON:0006562!3.84e-21!24;UBERON:0003408!3.84e-21!24;UBERON:0001557!3.84e-21!24;UBERON:0001042!3.84e-21!24;UBERON:0008814!3.84e-21!24;UBERON:0009145!3.84e-21!24;UBERON:0004177!1.20e-18!29;UBERON:0000072!2.91e-18!27;UBERON:0002390!4.70e-15!45;UBERON:0003061!4.70e-15!45;UBERON:0000063!1.54e-14!35;UBERON:0002193!9.38e-14!48;UBERON:0000065!1.88e-10!41;UBERON:0001004!4.25e-10!42;UBERON:0005057!1.06e-09!51;UBERON:0002384!7.51e-09!46;UBERON:0002405!1.16e-08!70;UBERON:0003081!4.78e-08!88;UBERON:0003929!1.11e-07!55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.41e-10,46;UBERON:0002370,8.16e-08,23;UBERON:0000974,8.16e-08,23;UBERON:0004807,8.16e-08,23;UBERON:0005058,8.16e-08,23;UBERON:0003351,8.16e-08,23;UBERON:0009113,8.16e-08,23;UBERON:0003295,8.16e-08,23;UBERON:0009722,8.16e-08,23;UBERON:0005562,8.16e-08,23;UBERON:0007690,8.16e-08,23;UBERON:0002390,1.70e-07,45;UBERON:0003061,1.70e-07,45;UBERON:0006562,1.73e-07,24;UBERON:0003408,1.73e-07,24;UBERON:0001557,1.73e-07,24;UBERON:0001042,1.73e-07,24;UBERON:0008814,1.73e-07,24;UBERON:0009145,1.73e-07,24;UBERON:0002193,5.38e-07,48;UBERON:0002405,5.38e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0.281577444303333,0.234064526321993,0,0,1.36960583944965,1.39872643870396,0,0,0,0,0,0,0,1.48936426801328,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,2.90144856804538,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0.838705871541442,0,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,2.80885274925294,1.80143534980301,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.849892149969277,1.25956307091292,0.276399947608848,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,1.39076948346885,0.240390899039938,0.147689527174577,1.00966449948148,0.609654453239999,0.201652370273681,0.38983152295901,0.288635524920988,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0.281577444303333,0.234064526321993,0,0,1.36960583944965,1.39872643870396,0,0,0,0,0,0,0,1.48936426801328,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,2.90144856804538,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0.838705871541442,0,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,2.80885274925294,1.80143534980301,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.849892149969277,1.25956307091292,0.276399947608848,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,1.39076948346885,0.240390899039938,0.147689527174577,1.00966449948148,0.609654453239999,0.201652370273681,0.38983152295901,0.288635524920988,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr19:44355454..44355460,+ | |short_description=p@chr19:44355454..44355460,+ | ||
}} | }} |
Revision as of 14:34, 14 November 2012
Short description: | p@chr19:44355454..44355460, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:44355454..44355460, + |
Coexpression cluster: | MCL_coexpression_mm9:280 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.23e-24 | 11 |
pro-T cell | 4.23e-24 | 11 |
lymphoid lineage restricted progenitor cell | 4.39e-22 | 12 |
mature alpha-beta T cell | 1.15e-20 | 9 |
alpha-beta T cell | 1.15e-20 | 9 |
immature T cell | 1.15e-20 | 9 |
mature T cell | 1.15e-20 | 9 |
immature alpha-beta T cell | 1.15e-20 | 9 |
lymphocyte | 2.23e-20 | 13 |
common lymphoid progenitor | 2.23e-20 | 13 |
leukocyte | 1.50e-15 | 17 |
nongranular leukocyte | 1.50e-15 | 17 |
CD4-positive, alpha-beta T cell | 5.05e-15 | 8 |
hematopoietic cell | 2.32e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.32e-14 | 32 |
hematopoietic stem cell | 2.32e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.32e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 1.66e-10 | 25 |
connective tissue cell | 8.41e-10 | 46 |
mesenchymal cell | 8.41e-10 | 46 |
CD8-positive, alpha-beta T cell | 4.39e-09 | 1 |
regulatory T cell | 1.05e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.05e-08 | 1 |
motile cell | 3.00e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.41e-10 | 46 |
thymus | 8.16e-08 | 23 |
neck | 8.16e-08 | 23 |
respiratory system epithelium | 8.16e-08 | 23 |
hemolymphoid system gland | 8.16e-08 | 23 |
pharyngeal epithelium | 8.16e-08 | 23 |
thymic region | 8.16e-08 | 23 |
pharyngeal gland | 8.16e-08 | 23 |
entire pharyngeal arch endoderm | 8.16e-08 | 23 |
thymus primordium | 8.16e-08 | 23 |
early pharyngeal endoderm | 8.16e-08 | 23 |
hematopoietic system | 1.70e-07 | 45 |
blood island | 1.70e-07 | 45 |
pharynx | 1.73e-07 | 24 |
gland of gut | 1.73e-07 | 24 |
upper respiratory tract | 1.73e-07 | 24 |
chordate pharynx | 1.73e-07 | 24 |
pharyngeal arch system | 1.73e-07 | 24 |
pharyngeal region of foregut | 1.73e-07 | 24 |
hemolymphoid system | 5.38e-07 | 48 |
immune system | 5.38e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.