FFCP PHASE1:Mm9::chr10:79479646..79479650,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr10:79479646..79479650,+ | |id=chr10:79479646..79479650,+ | ||
|ontology_enrichment_celltype=CL:0000988!5.54e-13!32;CL:0002032!5.54e-13!32;CL:0000037!5.54e-13!32;CL:0000566!5.54e-13!32;CL:0000837!5.54e-13!32;CL:0002031!4.61e-11!25;CL:0002320!1.51e-08!46;CL:0000134!1.51e-08!46;CL:0000838!1.74e-08!12;CL:0000738!8.86e-08!17;CL:0002087!8.86e-08!17;CL:0000542!1.32e-07!13;CL:0000051!1.32e-07!13;CL:0000084!1.81e-07!11;CL:0000827!1.81e-07!11;CL:0000049!8.83e-07!19 | |ontology_enrichment_celltype=CL:0000988!5.54e-13!32;CL:0002032!5.54e-13!32;CL:0000037!5.54e-13!32;CL:0000566!5.54e-13!32;CL:0000837!5.54e-13!32;CL:0002031!4.61e-11!25;CL:0002320!1.51e-08!46;CL:0000134!1.51e-08!46;CL:0000838!1.74e-08!12;CL:0000738!8.86e-08!17;CL:0002087!8.86e-08!17;CL:0000542!1.32e-07!13;CL:0000051!1.32e-07!13;CL:0000084!1.81e-07!11;CL:0000827!1.81e-07!11;CL:0000049!8.83e-07!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.85e-12,25;CL:0000838,1.61e-11,12;CL:0000988,5.61e-11,32;CL:0002032,5.61e-11,32;CL:0000037,5.61e-11,32;CL:0000837,5.61e-11,32;CL:0000542,1.47e-10,13;CL:0000051,1.47e-10,13;CL:0000738,2.74e-10,17;CL:0002087,2.74e-10,17;CL:0000084,2.45e-09,11;CL:0000827,2.45e-09,11;CL:0000791,2.16e-08,9;CL:0000789,2.16e-08,9;CL:0002420,2.16e-08,9;CL:0002419,2.16e-08,9;CL:0000790,2.16e-08,9;CL:0002320,6.40e-07,46;CL:0000134,6.40e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.33e-26!48;UBERON:0002390!2.88e-23!45;UBERON:0003061!2.88e-23!45;UBERON:0002405!6.53e-19!70;UBERON:0004177!1.76e-16!29;UBERON:0002370!3.56e-12!23;UBERON:0000974!3.56e-12!23;UBERON:0004807!3.56e-12!23;UBERON:0005058!3.56e-12!23;UBERON:0003351!3.56e-12!23;UBERON:0009113!3.56e-12!23;UBERON:0003295!3.56e-12!23;UBERON:0009722!3.56e-12!23;UBERON:0005562!3.56e-12!23;UBERON:0007690!3.56e-12!23;UBERON:0006562!2.04e-11!24;UBERON:0003408!2.04e-11!24;UBERON:0001557!2.04e-11!24;UBERON:0001042!2.04e-11!24;UBERON:0008814!2.04e-11!24;UBERON:0009145!2.04e-11!24;UBERON:0003081!2.77e-10!88;UBERON:0005057!3.39e-10!51;UBERON:0000072!1.69e-09!27;UBERON:0002384!1.51e-08!46;UBERON:0000065!4.61e-08!41;UBERON:0001004!1.04e-07!42;UBERON:0002371!1.65e-07!16 | |ontology_enrichment_uberon=UBERON:0002193!6.33e-26!48;UBERON:0002390!2.88e-23!45;UBERON:0003061!2.88e-23!45;UBERON:0002405!6.53e-19!70;UBERON:0004177!1.76e-16!29;UBERON:0002370!3.56e-12!23;UBERON:0000974!3.56e-12!23;UBERON:0004807!3.56e-12!23;UBERON:0005058!3.56e-12!23;UBERON:0003351!3.56e-12!23;UBERON:0009113!3.56e-12!23;UBERON:0003295!3.56e-12!23;UBERON:0009722!3.56e-12!23;UBERON:0005562!3.56e-12!23;UBERON:0007690!3.56e-12!23;UBERON:0006562!2.04e-11!24;UBERON:0003408!2.04e-11!24;UBERON:0001557!2.04e-11!24;UBERON:0001042!2.04e-11!24;UBERON:0008814!2.04e-11!24;UBERON:0009145!2.04e-11!24;UBERON:0003081!2.77e-10!88;UBERON:0005057!3.39e-10!51;UBERON:0000072!1.69e-09!27;UBERON:0002384!1.51e-08!46;UBERON:0000065!4.61e-08!41;UBERON:0001004!1.04e-07!42;UBERON:0002371!1.65e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.06e-14,48;UBERON:0002405,5.06e-14,48;UBERON:0002390,1.14e-11,45;UBERON:0003061,1.14e-11,45;UBERON:0002370,3.03e-11,23;UBERON:0000974,3.03e-11,23;UBERON:0004807,3.03e-11,23;UBERON:0005058,3.03e-11,23;UBERON:0003351,3.03e-11,23;UBERON:0009113,3.03e-11,23;UBERON:0003295,3.03e-11,23;UBERON:0009722,3.03e-11,23;UBERON:0005562,3.03e-11,23;UBERON:0007690,3.03e-11,23;UBERON:0006562,1.07e-10,24;UBERON:0003408,1.07e-10,24;UBERON:0001557,1.07e-10,24;UBERON:0001042,1.07e-10,24;UBERON:0008814,1.07e-10,24;UBERON:0009145,1.07e-10,24;UBERON:0004177,2.92e-10,29;UBERON:0005057,2.92e-10,29;UBERON:0000072,2.65e-09,27;UBERON:0000077,3.85e-08,35;UBERON:0002384,6.40e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,0.985521055061667,0.234064526321993,0,0,2.73921167889929,2.09808965805594,0.666219523631325,0.404950534779652,0.699561878128147,1.26184866143295,1.7824876368746,1.69755860719212,0,0.297872853602656,1.04479915655574,0.47997726838022,1.14704640533585,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,3.34825304589526,1.5626706890476,0.523523743973798,5.88231488031014,4.09827290975067,3.39857247121808,0,0,0,0,0,0,0,0,0,2.34895648480831,1.45072428402269,5.71359458542189,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,0,0.11981512450592,0.599902730993408,1.01656181658452,0,0,0,0,0,0,0,0.101839363850316,0.746441823660558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0.162135226775035,0,1.43768206527355,1.11642284300551,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,1.03610989119537,0.433947175744535,3.01582567878545,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,0,1.02522528478712,0.206386867963223,0.740778109478847,0.565105371014073,0.410082683163076,0.686334519619568,0.509935289981566,0.69975726161829,0.967399816630967,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.410843828659309,0.25984164595559,0.537080087002444,0.79472541912506,1.32214994471966,1.77227432609493,1.41353029927407,1.600342939755,2.21817607301049,1.46186821109629,2.69393156592922,3.74006086981021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,2.1950964985068,0.985521055061667,0.234064526321993,0,0,2.73921167889929,2.09808965805594,0.666219523631325,0.404950534779652,0.699561878128147,1.26184866143295,1.7824876368746,1.69755860719212,0,0.297872853602656,1.04479915655574,0.47997726838022,1.14704640533585,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,3.34825304589526,1.5626706890476,0.523523743973798,5.88231488031014,4.09827290975067,3.39857247121808,0,0,0,0,0,0,0,0,0,2.34895648480831,1.45072428402269,5.71359458542189,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,0,0.11981512450592,0.599902730993408,1.01656181658452,0,0,0,0,0,0,0,0.101839363850316,0.746441823660558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0.162135226775035,0,1.43768206527355,1.11642284300551,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,1.03610989119537,0.433947175744535,3.01582567878545,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,0,1.02522528478712,0.206386867963223,0.740778109478847,0.565105371014073,0.410082683163076,0.686334519619568,0.509935289981566,0.69975726161829,0.967399816630967,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.410843828659309,0.25984164595559,0.537080087002444,0.79472541912506,1.32214994471966,1.77227432609493,1.41353029927407,1.600342939755,2.21817607301049,1.46186821109629,2.69393156592922,3.74006086981021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p6@Hmha1 | |short_description=p6@Hmha1 | ||
}} | }} |
Revision as of 15:29, 14 November 2012
Short description: | p6@Hmha1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Hmha1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -10bp_to_ENSMUST00000105373, uc007gbf.2_5end |
EntrezGene: | Hmha1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.85e-12 | 25 |
lymphoid lineage restricted progenitor cell | 1.61e-11 | 12 |
hematopoietic cell | 5.61e-11 | 32 |
hematopoietic oligopotent progenitor cell | 5.61e-11 | 32 |
hematopoietic stem cell | 5.61e-11 | 32 |
hematopoietic multipotent progenitor cell | 5.61e-11 | 32 |
lymphocyte | 1.47e-10 | 13 |
common lymphoid progenitor | 1.47e-10 | 13 |
leukocyte | 2.74e-10 | 17 |
nongranular leukocyte | 2.74e-10 | 17 |
T cell | 2.45e-09 | 11 |
pro-T cell | 2.45e-09 | 11 |
mature alpha-beta T cell | 2.16e-08 | 9 |
alpha-beta T cell | 2.16e-08 | 9 |
immature T cell | 2.16e-08 | 9 |
mature T cell | 2.16e-08 | 9 |
immature alpha-beta T cell | 2.16e-08 | 9 |
connective tissue cell | 6.40e-07 | 46 |
mesenchymal cell | 6.40e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.06e-14 | 48 |
immune system | 5.06e-14 | 48 |
hematopoietic system | 1.14e-11 | 45 |
blood island | 1.14e-11 | 45 |
thymus | 3.03e-11 | 23 |
neck | 3.03e-11 | 23 |
respiratory system epithelium | 3.03e-11 | 23 |
hemolymphoid system gland | 3.03e-11 | 23 |
pharyngeal epithelium | 3.03e-11 | 23 |
thymic region | 3.03e-11 | 23 |
pharyngeal gland | 3.03e-11 | 23 |
entire pharyngeal arch endoderm | 3.03e-11 | 23 |
thymus primordium | 3.03e-11 | 23 |
early pharyngeal endoderm | 3.03e-11 | 23 |
pharynx | 1.07e-10 | 24 |
gland of gut | 1.07e-10 | 24 |
upper respiratory tract | 1.07e-10 | 24 |
chordate pharynx | 1.07e-10 | 24 |
pharyngeal arch system | 1.07e-10 | 24 |
pharyngeal region of foregut | 1.07e-10 | 24 |
hemopoietic organ | 2.92e-10 | 29 |
immune organ | 2.92e-10 | 29 |
segment of respiratory tract | 2.65e-09 | 27 |
mixed endoderm/mesoderm-derived structure | 3.85e-08 | 35 |
connective tissue | 6.40e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.