FFCP PHASE1:Mm9::chr11:84684198..84684213,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 8: | Line 8: | ||
|id=chr11:84684198..84684213,- | |id=chr11:84684198..84684213,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.10e-07,87;UBERON:0000926,8.24e-07,120;UBERON:0004120,8.24e-07,120;UBERON:0006603,8.24e-07,120 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,1.20985684522732,1.00179145989269,1.51091344720701,0.467225281191051,2.06597317506522,1.54867594366833,0.468129052643987,0.34243593645101,0.558405112967355,3.0816131387617,2.53519167015092,1.99865857089398,0.607425802169478,0.699561878128147,2.20823515750766,2.87940310572051,2.54633791078818,2.89147186513637,0.496454756004426,0.522399578277871,1.11994695955385,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.504060259519861,0.443461021310609,0,0,0,0,0.166234645358492,0,4.60384793810598,4.6880120671428,4.71171369576418,4.1176204162171,4.09827290975067,5.34061388334269,0.629484089877886,0.811015449756117,0.550640256485045,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,2.68452169692378,2.17608642603403,3.6970317905671,0.257259436035947,0.286533439938757,0.515672092277442,0.404632921719196,0,0,0,0,1.3498495759221,0,0,0,0,0.207379224616955,0.135005938331691,0.630974884054146,0.285650984403804,0,0.367472397644862,0,0,1.10115880999389,1.14918604276669,0.768032666281217,0,0,0,0.558365998002762,0.56276261003168,0.45839474333043,0,0.569486723196412,0,0.530083353332288,0.68014404096107,3.18850937571846,0.860423876981386,0,0.539703191637817,0,0.448026887097336,0.702222100658759,1.02258193546835,1.03914401841148,0.35333957451034,0.845060518660083,0,12.7402619853323,0,0.216491041011214,0.253359865475099,1.01104889002957,1.1418387971906,2.58937883647172,1.03909497345377,0.346970653532272,0.913396434936424,0.230615497256059,0.301445281105245,0.352766121407114,1.0053327306374,0.247194967734374,2.74738778147832,4.42305275974937,1.45590164952668,1.76673214768315,2.42437626567611,0,0,1.04723353406728,0.510914110417183,1.1981512450592,1.19980546198682,0.508280908292259,0.449371918214468,0.915001205637253,0.879580464790051,0.521472960576829,1.27857728665165,0.62336413367868,1.46017136760982,0.509196819251581,1.7416975885413,0,1.26265113531884,0,0,0.720248519221397,0.60281927134286,0.272145996605311,0.512454881139399,0.468508622798644,1.03481348295606,0,0.567318240503458,1.40760899331159,0.876782929710299,0.556094498451196,0.348252166522167,0.823128545631774,0,2.1066395619397,1.02939162845886,0.852490498186778,0,0.469052119962192,0.540186184383045,0.473489471170421,0.787056926989615,1.07986979021165,1.86027155800326,2.41446061259657,1.05088808130453,1.48103864922132,1.80584210487005,2.10778904819225,3.21639972335731,1.75640092232841,2.54992195644706,1.26173969138476,1.13195073617213,0.991256348951394,0,0.213288250535234,0.464473343720877,0.902072229254653,0.403367049246685,0.22237804384487,0.760902504450237,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,1.55971269695296,0.898819408654221,0.864552199498777,0.995706366271836,0.189667900953082,0.685491075658373,0,0,0.193952487167626,0.210407459670956,1.01178459398812,1.03327103585722,0.31399745568275,0.493588655687202,1.1858105083486,0.500535317148282,0.196558995113203,0.224862112384854,0.811440485554012,0.72353147925725,1.2731292589071,0.287696137450811,0.810676133875177,1.09824565275233,1.43768206527355,0,0.936113019343682,1.01031551178845,0.179397413521912,0.964887042726734,2.40179147216586,0.568474235311454,0.977789858652155,0.509235257325564,0.704070744865506,1.50755631697634,1.90434912708811,2.14647012643579,0.945810864637146,0.8858587585951,1.11618338060241,0.983179888294428,2.07221978239075,1.88043776155965,1.50791283939272,0.54390568381871,1.47529281905711,0.827810238914197,0.642202359951168,1.17211686592203,0.163934945376675,1.76729649043061,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0.222798674082394,1.13230612315533,0,0,0.790575555893047,0,1.13552068166615,0.534196811001766,0.162886959353576,1.15479086080775,2.65490276679926,0.242780636154981,0.604647113929502,0.377210159511796,0.885905678642318,1.22974059177571,1.03371317267288,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.428674070063185,0.709360934569094,0.713475270408282,0.329098041204242,0,0.469343416127421,0.42366414172764,0.661585194164886,1.48397627647332,0.484393280087717,1.08563264870681,0.716234064018819,1.31312719796049,0.582961673259701,0.556275906031529,2.05045056957423,0,0.925972636848558,1.31857919903284,1.6403307326523,1.83022538565218,0.509935289981566,1.39951452323658,0.552799895217695,1.90934123603023,0.474503990371703,0.813277868507395,0.86404272657441,0.836353184057875,1.31017538247707,1.48350781023303,1.32245529160537,1.57053565190418,0.777689839750757,1.24267862617385,18.6018669765783,0.299033092087958,0.165458490457098,0.194451188344048,0.516639293910924,0.337912250981556,0.469428954583016,0.39061315453185,0.629156066554265,3.62376181239009,10.9451402377989,1.26404448251271,0.202725215290164,0.308132871494482,0.129920822977795,1.43221356533985,0.993406773906324,2.04332264183947,2.21534290761866,2.3222283488074,1.37172251979,1.61321896218945,2.33898913775406,2.30908419936791,1.8700304349051,1.81384306892169,0,0.0897138566094757,0,0.579568782096571,0.563047426353546,1.09890974560359,0.428736758158132,2.00628841614145,1.6942555278512,0.920650473014354,1.14579102687879,0.343706364687375,0.685082519770642,2.2661816921691,0,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0.853668028770671,0.729320151204882,0.419226325255965,0.551530525350042,0.666740183404846,1.03017528619447,1.28367683836726,0.252697211763798,0.50695859978048,0.754505365544305,0.749132059759059,0.960377286073039,0.746661096422973,0.952587382566147,0.463537303779422,0.578727661391115,0.412085900803307,0.883193520806384,0.342869252385415,0.887379030796687,0.953744759789284,0.726732083161643,0.752875043322645,0.507687647350059,1.09756783723664,0.526139422875686,1.22223702461276,1.68342681497322,0.474540072496697,0.689531376628944,1.22769312950907,2.01417893541756,0.578719832943424,0.499621155875892,0.935726433781634,1.28922632428979,1.14772999241306,1.32354851471709,1.85494268496337 | |phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,1.20985684522732,1.00179145989269,1.51091344720701,0.467225281191051,2.06597317506522,1.54867594366833,0.468129052643987,0.34243593645101,0.558405112967355,3.0816131387617,2.53519167015092,1.99865857089398,0.607425802169478,0.699561878128147,2.20823515750766,2.87940310572051,2.54633791078818,2.89147186513637,0.496454756004426,0.522399578277871,1.11994695955385,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.504060259519861,0.443461021310609,0,0,0,0,0.166234645358492,0,4.60384793810598,4.6880120671428,4.71171369576418,4.1176204162171,4.09827290975067,5.34061388334269,0.629484089877886,0.811015449756117,0.550640256485045,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,2.68452169692378,2.17608642603403,3.6970317905671,0.257259436035947,0.286533439938757,0.515672092277442,0.404632921719196,0,0,0,0,1.3498495759221,0,0,0,0,0.207379224616955,0.135005938331691,0.630974884054146,0.285650984403804,0,0.367472397644862,0,0,1.10115880999389,1.14918604276669,0.768032666281217,0,0,0,0.558365998002762,0.56276261003168,0.45839474333043,0,0.569486723196412,0,0.530083353332288,0.68014404096107,3.18850937571846,0.860423876981386,0,0.539703191637817,0,0.448026887097336,0.702222100658759,1.02258193546835,1.03914401841148,0.35333957451034,0.845060518660083,0,12.7402619853323,0,0.216491041011214,0.253359865475099,1.01104889002957,1.1418387971906,2.58937883647172,1.03909497345377,0.346970653532272,0.913396434936424,0.230615497256059,0.301445281105245,0.352766121407114,1.0053327306374,0.247194967734374,2.74738778147832,4.42305275974937,1.45590164952668,1.76673214768315,2.42437626567611,0,0,1.04723353406728,0.510914110417183,1.1981512450592,1.19980546198682,0.508280908292259,0.449371918214468,0.915001205637253,0.879580464790051,0.521472960576829,1.27857728665165,0.62336413367868,1.46017136760982,0.509196819251581,1.7416975885413,0,1.26265113531884,0,0,0.720248519221397,0.60281927134286,0.272145996605311,0.512454881139399,0.468508622798644,1.03481348295606,0,0.567318240503458,1.40760899331159,0.876782929710299,0.556094498451196,0.348252166522167,0.823128545631774,0,2.1066395619397,1.02939162845886,0.852490498186778,0,0.469052119962192,0.540186184383045,0.473489471170421,0.787056926989615,1.07986979021165,1.86027155800326,2.41446061259657,1.05088808130453,1.48103864922132,1.80584210487005,2.10778904819225,3.21639972335731,1.75640092232841,2.54992195644706,1.26173969138476,1.13195073617213,0.991256348951394,0,0.213288250535234,0.464473343720877,0.902072229254653,0.403367049246685,0.22237804384487,0.760902504450237,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,1.55971269695296,0.898819408654221,0.864552199498777,0.995706366271836,0.189667900953082,0.685491075658373,0,0,0.193952487167626,0.210407459670956,1.01178459398812,1.03327103585722,0.31399745568275,0.493588655687202,1.1858105083486,0.500535317148282,0.196558995113203,0.224862112384854,0.811440485554012,0.72353147925725,1.2731292589071,0.287696137450811,0.810676133875177,1.09824565275233,1.43768206527355,0,0.936113019343682,1.01031551178845,0.179397413521912,0.964887042726734,2.40179147216586,0.568474235311454,0.977789858652155,0.509235257325564,0.704070744865506,1.50755631697634,1.90434912708811,2.14647012643579,0.945810864637146,0.8858587585951,1.11618338060241,0.983179888294428,2.07221978239075,1.88043776155965,1.50791283939272,0.54390568381871,1.47529281905711,0.827810238914197,0.642202359951168,1.17211686592203,0.163934945376675,1.76729649043061,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0.222798674082394,1.13230612315533,0,0,0.790575555893047,0,1.13552068166615,0.534196811001766,0.162886959353576,1.15479086080775,2.65490276679926,0.242780636154981,0.604647113929502,0.377210159511796,0.885905678642318,1.22974059177571,1.03371317267288,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.428674070063185,0.709360934569094,0.713475270408282,0.329098041204242,0,0.469343416127421,0.42366414172764,0.661585194164886,1.48397627647332,0.484393280087717,1.08563264870681,0.716234064018819,1.31312719796049,0.582961673259701,0.556275906031529,2.05045056957423,0,0.925972636848558,1.31857919903284,1.6403307326523,1.83022538565218,0.509935289981566,1.39951452323658,0.552799895217695,1.90934123603023,0.474503990371703,0.813277868507395,0.86404272657441,0.836353184057875,1.31017538247707,1.48350781023303,1.32245529160537,1.57053565190418,0.777689839750757,1.24267862617385,18.6018669765783,0.299033092087958,0.165458490457098,0.194451188344048,0.516639293910924,0.337912250981556,0.469428954583016,0.39061315453185,0.629156066554265,3.62376181239009,10.9451402377989,1.26404448251271,0.202725215290164,0.308132871494482,0.129920822977795,1.43221356533985,0.993406773906324,2.04332264183947,2.21534290761866,2.3222283488074,1.37172251979,1.61321896218945,2.33898913775406,2.30908419936791,1.8700304349051,1.81384306892169,0,0.0897138566094757,0,0.579568782096571,0.563047426353546,1.09890974560359,0.428736758158132,2.00628841614145,1.6942555278512,0.920650473014354,1.14579102687879,0.343706364687375,0.685082519770642,2.2661816921691,0,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0.853668028770671,0.729320151204882,0.419226325255965,0.551530525350042,0.666740183404846,1.03017528619447,1.28367683836726,0.252697211763798,0.50695859978048,0.754505365544305,0.749132059759059,0.960377286073039,0.746661096422973,0.952587382566147,0.463537303779422,0.578727661391115,0.412085900803307,0.883193520806384,0.342869252385415,0.887379030796687,0.953744759789284,0.726732083161643,0.752875043322645,0.507687647350059,1.09756783723664,0.526139422875686,1.22223702461276,1.68342681497322,0.474540072496697,0.689531376628944,1.22769312950907,2.01417893541756,0.578719832943424,0.499621155875892,0.935726433781634,1.28922632428979,1.14772999241306,1.32354851471709,1.85494268496337 | ||
|short_description=p5@Ggnbp2 | |short_description=p5@Ggnbp2 | ||
}} | }} | ||
Revision as of 19:43, 14 November 2012
| Short description: | p5@Ggnbp2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Ggnbp2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | 13bp_to_ENSMUST00000170741_5end |
| EntrezGene: | Ggnbp2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lateral plate mesoderm | 1.10e-07 | 87 |
| mesoderm | 8.24e-07 | 120 |
| mesoderm-derived structure | 8.24e-07 | 120 |
| presumptive mesoderm | 8.24e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
