FFCP PHASE1:Mm9::chr15:89354065..89354076,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr15:89354065..89354076,- | |id=chr15:89354065..89354076,- | ||
|ontology_enrichment_celltype=CL:0000117!2.37e-09!23;CL:0000337!2.37e-09!23;CL:0002614!8.71e-09!3 | |ontology_enrichment_celltype=CL:0000117!2.37e-09!23;CL:0000337!2.37e-09!23;CL:0002614!8.71e-09!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.88e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!1.72e-16!12;UBERON:0003057!1.72e-16!12;UBERON:0002298!3.52e-16!6;UBERON:0001049!5.99e-14!52;UBERON:0005068!5.99e-14!52;UBERON:0006241!5.99e-14!52;UBERON:0007135!5.99e-14!52;UBERON:0001017!6.23e-14!73;UBERON:0005743!6.23e-14!73;UBERON:0000073!2.04e-13!75;UBERON:0001016!2.04e-13!75;UBERON:0000955!1.34e-11!50;UBERON:0006238!1.34e-11!50;UBERON:0002346!2.26e-11!71;UBERON:0003075!2.26e-11!71;UBERON:0007284!2.26e-11!71;UBERON:0002950!3.11e-11!4;UBERON:0001891!3.11e-11!4;UBERON:0009616!3.11e-11!4;UBERON:0000033!9.22e-11!63;UBERON:0004121!2.02e-10!102;UBERON:0000924!2.02e-10!102;UBERON:0006601!2.02e-10!102;UBERON:0002616!2.39e-10!49;UBERON:0002240!2.63e-10!6;UBERON:0005174!2.63e-10!6;UBERON:0001137!2.63e-10!6;UBERON:0002038!8.71e-09!3;UBERON:0002308!8.71e-09!3;UBERON:0009663!8.71e-09!3;UBERON:0009661!8.71e-09!3;UBERON:0006331!8.71e-09!3;UBERON:0000125!8.71e-09!3;UBERON:0001948!5.06e-08!5;UBERON:0002315!5.06e-08!5;UBERON:0004733!8.47e-08!6;UBERON:0004732!8.47e-08!6;UBERON:0002028!8.47e-08!6;UBERON:0007277!8.47e-08!6;UBERON:0002020!8.47e-07!34 | |ontology_enrichment_uberon=UBERON:0003076!1.72e-16!12;UBERON:0003057!1.72e-16!12;UBERON:0002298!3.52e-16!6;UBERON:0001049!5.99e-14!52;UBERON:0005068!5.99e-14!52;UBERON:0006241!5.99e-14!52;UBERON:0007135!5.99e-14!52;UBERON:0001017!6.23e-14!73;UBERON:0005743!6.23e-14!73;UBERON:0000073!2.04e-13!75;UBERON:0001016!2.04e-13!75;UBERON:0000955!1.34e-11!50;UBERON:0006238!1.34e-11!50;UBERON:0002346!2.26e-11!71;UBERON:0003075!2.26e-11!71;UBERON:0007284!2.26e-11!71;UBERON:0002950!3.11e-11!4;UBERON:0001891!3.11e-11!4;UBERON:0009616!3.11e-11!4;UBERON:0000033!9.22e-11!63;UBERON:0004121!2.02e-10!102;UBERON:0000924!2.02e-10!102;UBERON:0006601!2.02e-10!102;UBERON:0002616!2.39e-10!49;UBERON:0002240!2.63e-10!6;UBERON:0005174!2.63e-10!6;UBERON:0001137!2.63e-10!6;UBERON:0002038!8.71e-09!3;UBERON:0002308!8.71e-09!3;UBERON:0009663!8.71e-09!3;UBERON:0009661!8.71e-09!3;UBERON:0006331!8.71e-09!3;UBERON:0000125!8.71e-09!3;UBERON:0001948!5.06e-08!5;UBERON:0002315!5.06e-08!5;UBERON:0004733!8.47e-08!6;UBERON:0004732!8.47e-08!6;UBERON:0002028!8.47e-08!6;UBERON:0007277!8.47e-08!6;UBERON:0002020!8.47e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,2.03e-33,6;UBERON:0004732,2.03e-33,6;UBERON:0002028,2.03e-33,6;UBERON:0007277,2.03e-33,6;UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0003076,2.99e-17,12;UBERON:0003057,2.99e-17,12;UBERON:0001896,4.02e-12,2;UBERON:0002298,4.02e-12,2;UBERON:0005290,4.02e-12,2;UBERON:0010096,4.02e-12,2;UBERON:0002038,1.88e-08,3;UBERON:0009663,1.88e-08,3;UBERON:0009661,1.88e-08,3;UBERON:0000125,1.88e-08,3;UBERON:0002308,1.88e-08,3;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.383062014255563,0.921639199537461,0,0,0,1.11673199600552,0.56276261003168,0.61119299110724,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5628351432194,4.60782754989601,0,0,0,0,0.898743836428936,0.457500602818626,0,0.347648640384553,0,0.41557608911912,0.973447578406546,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.383062014255563,0.921639199537461,0,0,0,1.11673199600552,0.56276261003168,0.61119299110724,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5628351432194,4.60782754989601,0,0,0,0,0.898743836428936,0.457500602818626,0,0.347648640384553,0,0.41557608911912,0.973447578406546,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENSMUST00000155610 | |short_description=p2@ENSMUST00000155610 | ||
}} | }} |
Revision as of 22:06, 14 November 2012
Short description: | p2@ENSMUST00000155610 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000155610_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 31bp_to_ENSMUST00000155610_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 2.03e-33 | 6 |
segmental subdivision of nervous system | 2.03e-33 | 6 |
hindbrain | 2.03e-33 | 6 |
presumptive hindbrain | 2.03e-33 | 6 |
cerebellum | 6.55e-23 | 4 |
regional part of metencephalon | 6.55e-23 | 4 |
metencephalon | 6.55e-23 | 4 |
future metencephalon | 6.55e-23 | 4 |
rhombic lip | 6.55e-23 | 4 |
posterior neural tube | 2.99e-17 | 12 |
chordal neural plate | 2.99e-17 | 12 |
medulla oblongata | 4.02e-12 | 2 |
brainstem | 4.02e-12 | 2 |
myelencephalon | 4.02e-12 | 2 |
future myelencephalon | 4.02e-12 | 2 |
substantia nigra | 1.88e-08 | 3 |
telencephalic nucleus | 1.88e-08 | 3 |
midbrain nucleus | 1.88e-08 | 3 |
neural nucleus | 1.88e-08 | 3 |
nucleus of brain | 1.88e-08 | 3 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.