FFCP PHASE1:Mm9::chr11:51981619..51981639,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:51981619..51981639,- | |id=chr11:51981619..51981639,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.74e-10,3;CL:0002202,5.74e-10,3;CL:0000069,5.74e-10,3;CL:0002632,5.74e-10,3;CL:0002368,5.74e-10,3;CL:0000307,5.74e-10,3;CL:0000377,5.74e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.29e-11!98;UBERON:0005178!7.98e-11!17;UBERON:0005181!7.98e-11!17;UBERON:0002224!7.98e-11!17;UBERON:0000915!7.98e-11!17;UBERON:0008947!7.98e-11!17;UBERON:0003258!7.98e-11!17;UBERON:0009569!1.35e-10!66;UBERON:0005177!1.87e-10!85;UBERON:0000466!2.22e-10!79;UBERON:0003104!2.29e-09!131;UBERON:0009142!2.29e-09!131;UBERON:0000464!5.06e-09!57;UBERON:0002048!1.56e-08!14;UBERON:0000117!1.56e-08!14;UBERON:0000171!1.56e-08!14;UBERON:0000170!1.56e-08!14;UBERON:0005597!1.56e-08!14;UBERON:0000118!1.56e-08!14;UBERON:0004119!6.72e-08!130;UBERON:0000925!6.72e-08!130;UBERON:0006595!6.72e-08!130;UBERON:0000077!8.74e-08!97;UBERON:0004921!2.02e-07!126;UBERON:0004185!2.02e-07!126;UBERON:0001007!3.56e-07!128;UBERON:0001555!3.56e-07!128;UBERON:0007026!3.56e-07!128;UBERON:0005157!6.46e-07!27 | |ontology_enrichment_uberon=UBERON:0002100!1.29e-11!98;UBERON:0005178!7.98e-11!17;UBERON:0005181!7.98e-11!17;UBERON:0002224!7.98e-11!17;UBERON:0000915!7.98e-11!17;UBERON:0008947!7.98e-11!17;UBERON:0003258!7.98e-11!17;UBERON:0009569!1.35e-10!66;UBERON:0005177!1.87e-10!85;UBERON:0000466!2.22e-10!79;UBERON:0003104!2.29e-09!131;UBERON:0009142!2.29e-09!131;UBERON:0000464!5.06e-09!57;UBERON:0002048!1.56e-08!14;UBERON:0000117!1.56e-08!14;UBERON:0000171!1.56e-08!14;UBERON:0000170!1.56e-08!14;UBERON:0005597!1.56e-08!14;UBERON:0000118!1.56e-08!14;UBERON:0004119!6.72e-08!130;UBERON:0000925!6.72e-08!130;UBERON:0006595!6.72e-08!130;UBERON:0000077!8.74e-08!97;UBERON:0004921!2.02e-07!126;UBERON:0004185!2.02e-07!126;UBERON:0001007!3.56e-07!128;UBERON:0001555!3.56e-07!128;UBERON:0007026!3.56e-07!128;UBERON:0005157!6.46e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.74e-20,17;UBERON:0005181,3.74e-20,17;UBERON:0002224,3.74e-20,17;UBERON:0000915,3.74e-20,17;UBERON:0008947,3.74e-20,17;UBERON:0003258,3.74e-20,17;UBERON:0002048,4.38e-13,14;UBERON:0000117,4.38e-13,14;UBERON:0000171,4.38e-13,14;UBERON:0000170,4.38e-13,14;UBERON:0005597,4.38e-13,14;UBERON:0000118,4.38e-13,14;UBERON:0000310,9.12e-11,6;UBERON:0001443,9.12e-11,6;UBERON:0005153,1.65e-10,17;UBERON:0004119,4.06e-10,118;UBERON:0000925,4.06e-10,118;UBERON:0006595,4.06e-10,118;UBERON:0003126,5.74e-10,3;UBERON:0001005,5.74e-10,3;UBERON:0007196,5.74e-10,3;UBERON:0001558,5.74e-10,3;UBERON:0004921,1.28e-09,114;UBERON:0001007,2.33e-09,116;UBERON:0001555,2.33e-09,116;UBERON:0007026,2.33e-09,116;UBERON:0001041,2.94e-09,80;UBERON:0005157,1.05e-08,20;UBERON:0000945,6.08e-08,16;UBERON:0010039,6.08e-08,16;UBERON:0009569,5.88e-07,66;UBERON:0000065,6.20e-07,41 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,1.46837401729345,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0,0,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,1.97180787687353,0,0,0,12.3399893376392,7.09407623330276,8.08839112023653,0.11418387971906,0.776813650941515,0.742210695324124,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0,1.02182822083437,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0,0,1.42575109390443,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.340182495756639,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0.540186184383045,0.473489471170421,0,0.308534225774757,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.438599962275997,0.658650345873152,0.134206418760372,0,0.102904612379284,0,0.264450566663544,1.91959425481711,2.32236671860439,1.9330119198314,1.4117846723634,0.889512175379481,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0,0.648414149624083,0.796565093017469,0.379335801906163,0.342745537829186,0,0.814605311381257,0.581857461502877,0.561086559122548,0.316182685621286,0.147610147979602,0,0,0.592905254174298,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0.896987067609561,0,1.47802552133284,1.51593129416388,1.95557971730431,1.18821560042632,0.938760993154008,1.00503754465089,0.714130922658041,0.780534591431195,1.10344600874334,1.10732344824387,0.318909537314974,0.327726629431476,1.03610989119537,1.01254341007058,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0.425820255624806,0.35613120733451,1.46598263418218,0.824850614862677,0,0.728341908464944,0,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,0,2.38307724027652,0.18006109403131,0.258717367565509,0.214337035031592,0.709360934569094,0.356737635204141,0.164549020602121,0,1.40803024838226,0.847328283455281,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,0,0,3.50857675537478,2.40752885580625,0,0.136694227721025,0,0,0,0.138199973804424,0,5.21954389408873,2.84647253977588,3.88819226958485,2.09088296014469,0.218362563746178,0.404593039154462,1.07449492442937,0.523511883968059,0.518459893167171,0,0,0.299033092087958,0,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.228620419965,0,0.194915761479505,0,0.233753804363138,0.680191150845634,0.443971906748129,0.179427713218951,0.167884616364078,0.772758376128762,1.31377732815827,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0,0,0,0,0.618105171716683,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.658765662907314,0.507687647350059,0.365855945745545,0,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,1.46837401729345,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0,0,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,1.97180787687353,0,0,0,12.3399893376392,7.09407623330276,8.08839112023653,0.11418387971906,0.776813650941515,0.742210695324124,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0,1.02182822083437,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0,0,1.42575109390443,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.340182495756639,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0.540186184383045,0.473489471170421,0,0.308534225774757,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.438599962275997,0.658650345873152,0.134206418760372,0,0.102904612379284,0,0.264450566663544,1.91959425481711,2.32236671860439,1.9330119198314,1.4117846723634,0.889512175379481,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0,0.648414149624083,0.796565093017469,0.379335801906163,0.342745537829186,0,0.814605311381257,0.581857461502877,0.561086559122548,0.316182685621286,0.147610147979602,0,0,0.592905254174298,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0.896987067609561,0,1.47802552133284,1.51593129416388,1.95557971730431,1.18821560042632,0.938760993154008,1.00503754465089,0.714130922658041,0.780534591431195,1.10344600874334,1.10732344824387,0.318909537314974,0.327726629431476,1.03610989119537,1.01254341007058,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0.425820255624806,0.35613120733451,1.46598263418218,0.824850614862677,0,0.728341908464944,0,0.754420319023592,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,0,2.38307724027652,0.18006109403131,0.258717367565509,0.214337035031592,0.709360934569094,0.356737635204141,0.164549020602121,0,1.40803024838226,0.847328283455281,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,0,0,3.50857675537478,2.40752885580625,0,0.136694227721025,0,0,0,0.138199973804424,0,5.21954389408873,2.84647253977588,3.88819226958485,2.09088296014469,0.218362563746178,0.404593039154462,1.07449492442937,0.523511883968059,0.518459893167171,0,0,0.299033092087958,0,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.228620419965,0,0.194915761479505,0,0.233753804363138,0.680191150845634,0.443971906748129,0.179427713218951,0.167884616364078,0.772758376128762,1.31377732815827,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0,0,0,0,0.618105171716683,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.658765662907314,0.507687647350059,0.365855945745545,0,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:51981619..51981639,- | |short_description=p@chr11:51981619..51981639,- | ||
}} | }} |
Revision as of 23:03, 14 November 2012
Short description: | p@chr11:51981619..51981639, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:51981619..51981639, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.74e-10 | 3 |
epithelial cell of tracheobronchial tree | 5.74e-10 | 3 |
branched duct epithelial cell | 5.74e-10 | 3 |
epithelial cell of lower respiratory tract | 5.74e-10 | 3 |
respiratory epithelial cell | 5.74e-10 | 3 |
tracheal epithelial cell | 5.74e-10 | 3 |
tracheoblast | 5.74e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 3.74e-20 | 17 |
thoracic segment organ | 3.74e-20 | 17 |
thoracic cavity | 3.74e-20 | 17 |
thoracic segment of trunk | 3.74e-20 | 17 |
respiratory primordium | 3.74e-20 | 17 |
endoderm of foregut | 3.74e-20 | 17 |
lung | 4.38e-13 | 14 |
respiratory tube | 4.38e-13 | 14 |
respiration organ | 4.38e-13 | 14 |
pair of lungs | 4.38e-13 | 14 |
lung primordium | 4.38e-13 | 14 |
lung bud | 4.38e-13 | 14 |
breast | 9.12e-11 | 6 |
chest | 9.12e-11 | 6 |
epithelial bud | 1.65e-10 | 17 |
endoderm-derived structure | 4.06e-10 | 118 |
endoderm | 4.06e-10 | 118 |
presumptive endoderm | 4.06e-10 | 118 |
trachea | 5.74e-10 | 3 |
respiratory airway | 5.74e-10 | 3 |
tracheobronchial tree | 5.74e-10 | 3 |
lower respiratory tract | 5.74e-10 | 3 |
subdivision of digestive tract | 1.28e-09 | 114 |
digestive system | 2.33e-09 | 116 |
digestive tract | 2.33e-09 | 116 |
primitive gut | 2.33e-09 | 116 |
foregut | 2.94e-09 | 80 |
epithelial fold | 1.05e-08 | 20 |
stomach | 6.08e-08 | 16 |
food storage organ | 6.08e-08 | 16 |
subdivision of trunk | 5.88e-07 | 66 |
respiratory tract | 6.20e-07 | 41 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.