FFCP PHASE1:Mm9::chr16:7217777..7217805,+: Difference between revisions
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|id=chr16:7217777..7217805,+ | |id=chr16:7217777..7217805,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!5.67e-13!10;UBERON:0000411!5.67e-13!10;UBERON:0001950!5.67e-13!10;UBERON:0002020!7.51e-12!34;UBERON:0001049!1.86e-10!52;UBERON:0005068!1.86e-10!52;UBERON:0006241!1.86e-10!52;UBERON:0007135!1.86e-10!52;UBERON:0001017!6.89e-10!73;UBERON:0005743!6.89e-10!73;UBERON:0000073!2.36e-09!75;UBERON:0001016!2.36e-09!75;UBERON:0002619!3.16e-09!17;UBERON:0000955!1.22e-08!50;UBERON:0006238!1.22e-08!50;UBERON:0000956!3.43e-08!21;UBERON:0001869!3.43e-08!21;UBERON:0000203!3.43e-08!21;UBERON:0002791!4.57e-08!29;UBERON:0003528!4.57e-08!29;UBERON:0001893!4.57e-08!29;UBERON:0002346!5.78e-08!71;UBERON:0003075!5.78e-08!71;UBERON:0007284!5.78e-08!71;UBERON:0000033!6.33e-08!63;UBERON:0002616!6.79e-08!49;UBERON:0003056!1.73e-07!49;UBERON:0003080!3.86e-07!40 | |ontology_enrichment_uberon=UBERON:0002021!5.67e-13!10;UBERON:0000411!5.67e-13!10;UBERON:0001950!5.67e-13!10;UBERON:0002020!7.51e-12!34;UBERON:0001049!1.86e-10!52;UBERON:0005068!1.86e-10!52;UBERON:0006241!1.86e-10!52;UBERON:0007135!1.86e-10!52;UBERON:0001017!6.89e-10!73;UBERON:0005743!6.89e-10!73;UBERON:0000073!2.36e-09!75;UBERON:0001016!2.36e-09!75;UBERON:0002619!3.16e-09!17;UBERON:0000955!1.22e-08!50;UBERON:0006238!1.22e-08!50;UBERON:0000956!3.43e-08!21;UBERON:0001869!3.43e-08!21;UBERON:0000203!3.43e-08!21;UBERON:0002791!4.57e-08!29;UBERON:0003528!4.57e-08!29;UBERON:0001893!4.57e-08!29;UBERON:0002346!5.78e-08!71;UBERON:0003075!5.78e-08!71;UBERON:0007284!5.78e-08!71;UBERON:0000033!6.33e-08!63;UBERON:0002616!6.79e-08!49;UBERON:0003056!1.73e-07!49;UBERON:0003080!3.86e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.24e-34,10;UBERON:0000411,3.24e-34,10;UBERON:0001950,3.24e-34,10;UBERON:0002619,8.50e-24,17;UBERON:0002020,1.48e-23,34;UBERON:0000956,1.26e-22,21;UBERON:0001869,1.26e-22,21;UBERON:0000203,1.26e-22,21;UBERON:0000073,2.23e-22,54;UBERON:0003528,1.23e-21,29;UBERON:0002791,1.23e-21,29;UBERON:0001893,1.23e-21,29;UBERON:0002780,2.19e-20,39;UBERON:0001890,2.19e-20,39;UBERON:0006240,2.19e-20,39;UBERON:0003080,8.48e-20,40;UBERON:0001017,1.88e-19,73;UBERON:0000955,7.89e-19,47;UBERON:0006238,7.89e-19,47;UBERON:0001016,7.95e-19,75;UBERON:0001049,1.57e-18,52;UBERON:0005068,1.57e-18,52;UBERON:0006241,1.57e-18,52;UBERON:0007135,1.57e-18,52;UBERON:0002616,8.36e-17,46;UBERON:0003056,1.40e-15,49;UBERON:0002346,2.12e-14,64;UBERON:0003075,2.12e-14,64;UBERON:0007284,2.12e-14,64;UBERON:0004121,5.24e-14,95;UBERON:0000924,5.24e-14,95;UBERON:0006601,5.24e-14,95;UBERON:0010371,3.44e-12,73;UBERON:0010314,6.06e-09,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.441737081903227,0,0,0,0,8.17198963745201,3.68655679814984,0,0,0,0,0,1.06958773443767,0.589257170947335,1.13897344639282,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,25.6200337578431,0.879580464790051,9.73416193076748,6.64860189058859,3.53239675751252,7.13861557498134,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,92.9481572653442,0.205809224758569,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,34.0600595407115,0.141940085208269,0,0,0.329940245945071,1.32745138339963,0.971122544619926,1.51161778482376,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,6.44455331110048,6.87474616127276,3.95262319390481,13.7016503954128,10.5755145634558,15.5255175053315,9.90706647093285,9.06284817968409,6.21312374102184,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0.581385666529314,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.441737081903227,0,0,0,0,8.17198963745201,3.68655679814984,0,0,0,0,0,1.06958773443767,0.589257170947335,1.13897344639282,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,25.6200337578431,0.879580464790051,9.73416193076748,6.64860189058859,3.53239675751252,7.13861557498134,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0,0,92.9481572653442,0.205809224758569,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,34.0600595407115,0.141940085208269,0,0,0.329940245945071,1.32745138339963,0.971122544619926,1.51161778482376,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,6.44455331110048,6.87474616127276,3.95262319390481,13.7016503954128,10.5755145634558,15.5255175053315,9.90706647093285,9.06284817968409,6.21312374102184,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0.581385666529314,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr16:7217777..7217805,+ | |short_description=p@chr16:7217777..7217805,+ | ||
}} | }} |
Revision as of 23:26, 14 November 2012
Short description: | p@chr16:7217777..7217805, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:7217777..7217805, + |
Coexpression cluster: | MCL_coexpression_mm9:223 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.24e-34 | 10 |
visual cortex | 3.24e-34 | 10 |
neocortex | 3.24e-34 | 10 |
regional part of cerebral cortex | 8.50e-24 | 17 |
gray matter | 1.48e-23 | 34 |
cerebral cortex | 1.26e-22 | 21 |
cerebral hemisphere | 1.26e-22 | 21 |
pallium | 1.26e-22 | 21 |
regional part of nervous system | 2.23e-22 | 54 |
brain grey matter | 1.23e-21 | 29 |
regional part of telencephalon | 1.23e-21 | 29 |
telencephalon | 1.23e-21 | 29 |
regional part of forebrain | 2.19e-20 | 39 |
forebrain | 2.19e-20 | 39 |
future forebrain | 2.19e-20 | 39 |
anterior neural tube | 8.48e-20 | 40 |
central nervous system | 1.88e-19 | 73 |
brain | 7.89e-19 | 47 |
future brain | 7.89e-19 | 47 |
nervous system | 7.95e-19 | 75 |
neural tube | 1.57e-18 | 52 |
neural rod | 1.57e-18 | 52 |
future spinal cord | 1.57e-18 | 52 |
neural keel | 1.57e-18 | 52 |
regional part of brain | 8.36e-17 | 46 |
pre-chordal neural plate | 1.40e-15 | 49 |
neurectoderm | 2.12e-14 | 64 |
neural plate | 2.12e-14 | 64 |
presumptive neural plate | 2.12e-14 | 64 |
ectoderm-derived structure | 5.24e-14 | 95 |
ectoderm | 5.24e-14 | 95 |
presumptive ectoderm | 5.24e-14 | 95 |
ecto-epithelium | 3.44e-12 | 73 |
structure with developmental contribution from neural crest | 6.06e-09 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.