FFCP PHASE1:Mm9::chrX:34529652..34529669,-: Difference between revisions
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|id=chrX:34529652..34529669,- | |id=chrX:34529652..34529669,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.20e-07,23;CL:0000337,5.20e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.97e-14!71;UBERON:0003075!2.97e-14!71;UBERON:0007284!2.97e-14!71;UBERON:0000033!7.11e-10!63;UBERON:0000153!9.67e-10!94;UBERON:0001049!2.20e-09!52;UBERON:0005068!2.20e-09!52;UBERON:0006241!2.20e-09!52;UBERON:0007135!2.20e-09!52;UBERON:0004121!1.08e-08!102;UBERON:0000924!1.08e-08!102;UBERON:0006601!1.08e-08!102;UBERON:0003056!1.58e-08!49;UBERON:0007811!2.97e-08!86;UBERON:0002616!7.43e-08!49;UBERON:0001017!7.51e-08!73;UBERON:0005743!7.51e-08!73;UBERON:0000955!1.32e-07!50;UBERON:0006238!1.32e-07!50;UBERON:0000073!1.76e-07!75;UBERON:0001016!1.76e-07!75 | |ontology_enrichment_uberon=UBERON:0002346!2.97e-14!71;UBERON:0003075!2.97e-14!71;UBERON:0007284!2.97e-14!71;UBERON:0000033!7.11e-10!63;UBERON:0000153!9.67e-10!94;UBERON:0001049!2.20e-09!52;UBERON:0005068!2.20e-09!52;UBERON:0006241!2.20e-09!52;UBERON:0007135!2.20e-09!52;UBERON:0004121!1.08e-08!102;UBERON:0000924!1.08e-08!102;UBERON:0006601!1.08e-08!102;UBERON:0003056!1.58e-08!49;UBERON:0007811!2.97e-08!86;UBERON:0002616!7.43e-08!49;UBERON:0001017!7.51e-08!73;UBERON:0005743!7.51e-08!73;UBERON:0000955!1.32e-07!50;UBERON:0006238!1.32e-07!50;UBERON:0000073!1.76e-07!75;UBERON:0001016!1.76e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.89e-20,92;UBERON:0002346,1.56e-13,64;UBERON:0003075,1.56e-13,64;UBERON:0007284,1.56e-13,64;UBERON:0010371,5.05e-12,73;UBERON:0000073,2.09e-11,54;UBERON:0001049,5.73e-11,52;UBERON:0005068,5.73e-11,52;UBERON:0006241,5.73e-11,52;UBERON:0007135,5.73e-11,52;UBERON:0001017,6.93e-11,73;UBERON:0001016,2.73e-10,75;UBERON:0004121,5.14e-10,95;UBERON:0000924,5.14e-10,95;UBERON:0006601,5.14e-10,95;UBERON:0002616,2.07e-09,46;UBERON:0000955,4.86e-09,47;UBERON:0006238,4.86e-09,47;UBERON:0003056,7.16e-09,49;UBERON:0002020,2.00e-07,34;UBERON:0003080,3.40e-07,40;UBERON:0002780,9.86e-07,39;UBERON:0001890,9.86e-07,39;UBERON:0006240,9.86e-07,39 | |||
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| ||
|short_description=p5@Sept6 | |short_description=p5@Sept6 | ||
}} | }} |
Revision as of 01:58, 15 November 2012
Short description: | p5@Sept6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sept6_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENSMUST00000053456, ENSMUST00000060474, ENSMUST00000115239_5end |
EntrezGene: | Sept6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.20e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.20e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.89e-20 | 92 |
neurectoderm | 1.56e-13 | 64 |
neural plate | 1.56e-13 | 64 |
presumptive neural plate | 1.56e-13 | 64 |
ecto-epithelium | 5.05e-12 | 73 |
regional part of nervous system | 2.09e-11 | 54 |
neural tube | 5.73e-11 | 52 |
neural rod | 5.73e-11 | 52 |
future spinal cord | 5.73e-11 | 52 |
neural keel | 5.73e-11 | 52 |
central nervous system | 6.93e-11 | 73 |
nervous system | 2.73e-10 | 75 |
ectoderm-derived structure | 5.14e-10 | 95 |
ectoderm | 5.14e-10 | 95 |
presumptive ectoderm | 5.14e-10 | 95 |
regional part of brain | 2.07e-09 | 46 |
brain | 4.86e-09 | 47 |
future brain | 4.86e-09 | 47 |
pre-chordal neural plate | 7.16e-09 | 49 |
gray matter | 2.00e-07 | 34 |
anterior neural tube | 3.40e-07 | 40 |
regional part of forebrain | 9.86e-07 | 39 |
forebrain | 9.86e-07 | 39 |
future forebrain | 9.86e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.