FFCP PHASE1:Hg19::chr13:111629545..111629550,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;6.76e-18;3!CL:0002178;1.03e-17;3!CL:0002076;1.50e-11;42!CL:0002251;5.85e-11;20!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | |ontology_enrichment_celltype_v019=CL:0000322;6.76e-18;3!CL:0002178;1.03e-17;3!CL:0002076;1.50e-11;42!CL:0002251;5.85e-11;20!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.76e-18,3;CL:0002178,9.46e-18,3;CL:0002076,1.56e-11,42;CL:0002251,5.70e-11,20;CL:0000223,1.35e-08,58;CL:0002202,7.48e-07,9;CL:0002632,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!3.51e-18!8;DOID:0050686!1.14e-14!137;DOID:3493!1.77e-13!2;DOID:162!7.30e-12!235;DOID:14566!1.66e-11!239;DOID:2531!5.94e-08!51;DOID:0060083!5.94e-08!51;DOID:0060085!3.62e-07!1;DOID:3165!3.62e-07!1;DOID:0060121!3.62e-07!1;DOID:2438!3.62e-07!1;DOID:4418!3.62e-07!1;DOID:1749!4.31e-07!14;DOID:305!4.67e-07!106 | |ontology_enrichment_disease=DOID:1036!3.51e-18!8;DOID:0050686!1.14e-14!137;DOID:3493!1.77e-13!2;DOID:162!7.30e-12!235;DOID:14566!1.66e-11!239;DOID:2531!5.94e-08!51;DOID:0060083!5.94e-08!51;DOID:0060085!3.62e-07!1;DOID:3165!3.62e-07!1;DOID:0060121!3.62e-07!1;DOID:2438!3.62e-07!1;DOID:4418!3.62e-07!1;DOID:1749!4.31e-07!14;DOID:305!4.67e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3910;4.32e-26;2!DOID:3493;8.10e-26;2!DOID:3908;2.66e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:1036;1.75e-07;8!DOID:3905;7.48e-07;9 | |ontology_enrichment_disease_v019=DOID:3910;4.32e-26;2!DOID:3493;8.10e-26;2!DOID:3908;2.66e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:1036;1.75e-07;8!DOID:3905;7.48e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,4.32e-26,2;DOID:3493,7.14e-26,2;DOID:3908,2.66e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:1036,1.80e-07,8;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0004913!2.52e-07!1;UBERON:0003703!2.52e-07!1;UBERON:0001174!2.52e-07!1;UBERON:0004914!2.52e-07!1;UBERON:0003343!6.40e-07!4;UBERON:0004785!6.40e-07!4 | |ontology_enrichment_uberon=UBERON:0004913!2.52e-07!1;UBERON:0003703!2.52e-07!1;UBERON:0001174!2.52e-07!1;UBERON:0004914!2.52e-07!1;UBERON:0003343!6.40e-07!4;UBERON:0004785!6.40e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.32e-26;2!UBERON:0002173;4.32e-26;2!UBERON:0002186;4.32e-26;2!UBERON:0004821;6.76e-18;3!UBERON:0007499;6.76e-18;3!UBERON:0003215;6.76e-18;3!UBERON:0010368;6.76e-18;3!UBERON:0009911;6.76e-18;3!UBERON:0002299;6.76e-18;3!UBERON:0006524;6.76e-18;3!UBERON:0008874;6.76e-18;3!UBERON:0002169;6.76e-18;3!UBERON:0004894;6.76e-18;3!UBERON:0009856;8.82e-14;4!UBERON:0003343;1.00e-13;4!UBERON:0004785;1.00e-13;4!UBERON:0000945;3.42e-11;5!UBERON:0010039;3.42e-11;5!UBERON:0000974;1.32e-09;6 | |ontology_enrichment_uberon_v019=UBERON:0004903;4.32e-26;2!UBERON:0002173;4.32e-26;2!UBERON:0002186;4.32e-26;2!UBERON:0004821;6.76e-18;3!UBERON:0007499;6.76e-18;3!UBERON:0003215;6.76e-18;3!UBERON:0010368;6.76e-18;3!UBERON:0009911;6.76e-18;3!UBERON:0002299;6.76e-18;3!UBERON:0006524;6.76e-18;3!UBERON:0008874;6.76e-18;3!UBERON:0002169;6.76e-18;3!UBERON:0004894;6.76e-18;3!UBERON:0009856;8.82e-14;4!UBERON:0003343;1.00e-13;4!UBERON:0004785;1.00e-13;4!UBERON:0000945;3.42e-11;5!UBERON:0010039;3.42e-11;5!UBERON:0000974;1.32e-09;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.32e-26,2;UBERON:0002173,4.32e-26,2;UBERON:0002186,4.32e-26,2;UBERON:0004821,6.76e-18,3;UBERON:0003215,6.76e-18,3;UBERON:0010368,6.76e-18,3;UBERON:0009911,6.76e-18,3;UBERON:0002299,6.76e-18,3;UBERON:0006524,6.76e-18,3;UBERON:0008874,6.76e-18,3;UBERON:0002169,6.76e-18,3;UBERON:0004894,6.76e-18,3;UBERON:0003343,1.00e-13,4;UBERON:0004785,1.00e-13,4;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8 | |||
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|short_description=p@chr13:111629545..111629550,+ | |short_description=p@chr13:111629545..111629550,+ | ||
}} | }} |
Revision as of 20:11, 15 November 2012
Short description: | p@chr13:111629545..111629550, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:111629545..111629550, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.76e-18 | 3 |
epithelial cell of stomach | 9.46e-18 | 3 |
endo-epithelial cell | 1.56e-11 | 42 |
epithelial cell of alimentary canal | 5.70e-11 | 20 |
endodermal cell | 1.35e-08 | 58 |
epithelial cell of tracheobronchial tree | 7.48e-07 | 9 |
epithelial cell of lower respiratory tract | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.32e-26 | 2 |
alveolar duct | 4.32e-26 | 2 |
bronchiole | 4.32e-26 | 2 |
pulmonary alveolus epithelium | 6.76e-18 | 3 |
alveolus | 6.76e-18 | 3 |
pulmonary lobule | 6.76e-18 | 3 |
lobule | 6.76e-18 | 3 |
alveolus of lung | 6.76e-18 | 3 |
alveolar system | 6.76e-18 | 3 |
pulmonary acinus | 6.76e-18 | 3 |
alveolar sac | 6.76e-18 | 3 |
alveolar wall | 6.76e-18 | 3 |
mucosa of oral region | 1.00e-13 | 4 |
respiratory system mucosa | 1.00e-13 | 4 |
stomach | 1.69e-07 | 8 |
food storage organ | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.32e-26 | 2 |
signet ring cell adenocarcinoma | 7.14e-26 | 2 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
chronic leukemia | 1.80e-07 | 8 |
lung carcinoma | 7.48e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.