FFCP PHASE1:Hg19::chr9:130524452..130524471,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000115!2.36e-23!35;CL:0002139!1.40e-21!24;CL:0000071!1.43e-20!18;CL:0002546!1.43e-20!18;CL:0002078!3.84e-17!44;CL:1000413!7.36e-13!9;CL:0000213!1.01e-11!57;CL:0000215!1.01e-11!57;CL:0002544!4.95e-08!6;CL:0002543!5.76e-08!6 | |ontology_enrichment_celltype=CL:0000115!2.36e-23!35;CL:0002139!1.40e-21!24;CL:0000071!1.43e-20!18;CL:0002546!1.43e-20!18;CL:0002078!3.84e-17!44;CL:1000413!7.36e-13!9;CL:0000213!1.01e-11!57;CL:0000215!1.01e-11!57;CL:0002544!4.95e-08!6;CL:0002543!5.76e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000115;3.37e-15;36!CL:0002139;2.46e-13;24!CL:0002262;5.82e-12;2!CL:1000398;5.82e-12;2!CL:0002078;6.25e-11;45!CL:0000071;1.79e-10;18!CL:0002543;6.04e-09;6 | |ontology_enrichment_celltype_v019=CL:0000115;3.37e-15;36!CL:0002139;2.46e-13;24!CL:0002262;5.82e-12;2!CL:1000398;5.82e-12;2!CL:0002078;6.25e-11;45!CL:0000071;1.79e-10;18!CL:0002543;6.04e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.28e-19,36;CL:0002078,9.88e-15,45;CL:0002139,4.16e-13,24;CL:0002262,5.53e-12,2;CL:1000398,5.53e-12,2;CL:0000213,6.59e-11,58;CL:0000215,6.59e-11,58;CL:0000071,2.42e-10,18;CL:0002546,2.42e-10,18;CL:0002543,8.58e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.66e-13;4!UBERON:0007284;2.66e-13;4!UBERON:0004872;9.71e-13;7!CL:0002546;1.79e-10;18!UBERON:0004140;5.40e-07;1 | |ontology_enrichment_development_v019=UBERON:0005062;2.66e-13;4!UBERON:0007284;2.66e-13;4!UBERON:0004872;9.71e-13;7!CL:0002546;1.79e-10;18!UBERON:0004140;5.40e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.40e-12;2!DOID:178;5.40e-07;1!DOID:326;5.40e-07;1!DOID:3978;5.40e-07;1!DOID:3394;5.40e-07;1!DOID:5844;5.40e-07;1 | |ontology_enrichment_disease_v019=DOID:114;1.40e-12;2!DOID:178;5.40e-07;1!DOID:326;5.40e-07;1!DOID:3978;5.40e-07;1!DOID:3394;5.40e-07;1!DOID:5844;5.40e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:114,1.71e-12,2;DOID:178,6.60e-07,1;DOID:326,6.60e-07,1;DOID:3978,6.60e-07,1;DOID:3394,6.60e-07,1;DOID:5844,6.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.98e-60!115;UBERON:0001986!1.43e-20!18;UBERON:0004638!1.43e-20!18;UBERON:0004852!1.43e-20!18;UBERON:0004111!1.03e-19!241;UBERON:0000025!9.71e-18!194;UBERON:0000477!1.10e-16!286;UBERON:0000487!4.71e-16!22;UBERON:0001049!6.35e-14!57;UBERON:0005068!6.35e-14!57;UBERON:0006241!6.35e-14!57;UBERON:0007135!6.35e-14!57;UBERON:0006914!1.26e-13!25;UBERON:0003915!7.36e-13!9;UBERON:0004700!7.36e-13!9;UBERON:0001917!7.36e-13!9;UBERON:0003080!5.94e-12!42;UBERON:0003075!9.76e-12!86;UBERON:0007284!9.76e-12!86;UBERON:0002616!6.20e-11!59;UBERON:0002346!7.34e-11!90;UBERON:0000055!7.59e-11!69;UBERON:0002780!8.42e-11!41;UBERON:0001890!8.42e-11!41;UBERON:0006240!8.42e-11!41;UBERON:0004872!1.20e-10!84;UBERON:0001981!7.58e-10!60;UBERON:0007500!7.58e-10!60;UBERON:0004537!7.58e-10!60;UBERON:0006965!7.58e-10!60;UBERON:0000483!1.26e-09!309;UBERON:0001893!1.39e-09!34;UBERON:0000119!2.22e-09!312;UBERON:0005743!2.95e-09!86;UBERON:0001869!3.75e-09!32;UBERON:0000955!4.01e-09!69;UBERON:0006238!4.01e-09!69;UBERON:0001017!4.15e-09!82;UBERON:0002791!9.05e-09!33;UBERON:0002049!1.25e-08!79;UBERON:0007798!1.25e-08!79;UBERON:0002020!1.85e-08!34;UBERON:0003528!1.85e-08!34;UBERON:0000467!2.66e-08!625;UBERON:0001009!2.79e-08!113;UBERON:0000480!3.00e-08!626;UBERON:0000468!3.39e-08!659;UBERON:0003103!7.85e-08!69;UBERON:0000073!9.63e-08!94;UBERON:0001016!9.63e-08!94;UBERON:0003056!1.19e-07!61;UBERON:0003978!1.96e-07!3;UBERON:0009751!1.96e-07!3;UBERON:0000946!1.96e-07!3;UBERON:0002523!1.96e-07!3;UBERON:0005983!1.96e-07!3;UBERON:0002165!1.96e-07!3;UBERON:0002062!1.96e-07!3;UBERON:0007280!1.96e-07!3;UBERON:0001638!2.69e-07!9;UBERON:0003920!2.69e-07!9;UBERON:0004582!2.69e-07!9;UBERON:0004151!4.47e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!4.98e-60!115;UBERON:0001986!1.43e-20!18;UBERON:0004638!1.43e-20!18;UBERON:0004852!1.43e-20!18;UBERON:0004111!1.03e-19!241;UBERON:0000025!9.71e-18!194;UBERON:0000477!1.10e-16!286;UBERON:0000487!4.71e-16!22;UBERON:0001049!6.35e-14!57;UBERON:0005068!6.35e-14!57;UBERON:0006241!6.35e-14!57;UBERON:0007135!6.35e-14!57;UBERON:0006914!1.26e-13!25;UBERON:0003915!7.36e-13!9;UBERON:0004700!7.36e-13!9;UBERON:0001917!7.36e-13!9;UBERON:0003080!5.94e-12!42;UBERON:0003075!9.76e-12!86;UBERON:0007284!9.76e-12!86;UBERON:0002616!6.20e-11!59;UBERON:0002346!7.34e-11!90;UBERON:0000055!7.59e-11!69;UBERON:0002780!8.42e-11!41;UBERON:0001890!8.42e-11!41;UBERON:0006240!8.42e-11!41;UBERON:0004872!1.20e-10!84;UBERON:0001981!7.58e-10!60;UBERON:0007500!7.58e-10!60;UBERON:0004537!7.58e-10!60;UBERON:0006965!7.58e-10!60;UBERON:0000483!1.26e-09!309;UBERON:0001893!1.39e-09!34;UBERON:0000119!2.22e-09!312;UBERON:0005743!2.95e-09!86;UBERON:0001869!3.75e-09!32;UBERON:0000955!4.01e-09!69;UBERON:0006238!4.01e-09!69;UBERON:0001017!4.15e-09!82;UBERON:0002791!9.05e-09!33;UBERON:0002049!1.25e-08!79;UBERON:0007798!1.25e-08!79;UBERON:0002020!1.85e-08!34;UBERON:0003528!1.85e-08!34;UBERON:0000467!2.66e-08!625;UBERON:0001009!2.79e-08!113;UBERON:0000480!3.00e-08!626;UBERON:0000468!3.39e-08!659;UBERON:0003103!7.85e-08!69;UBERON:0000073!9.63e-08!94;UBERON:0001016!9.63e-08!94;UBERON:0003056!1.19e-07!61;UBERON:0003978!1.96e-07!3;UBERON:0009751!1.96e-07!3;UBERON:0000946!1.96e-07!3;UBERON:0002523!1.96e-07!3;UBERON:0005983!1.96e-07!3;UBERON:0002165!1.96e-07!3;UBERON:0002062!1.96e-07!3;UBERON:0007280!1.96e-07!3;UBERON:0001638!2.69e-07!9;UBERON:0003920!2.69e-07!9;UBERON:0004582!2.69e-07!9;UBERON:0004151!4.47e-07!3 | ||
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|short_description=p12@SH2D3C | |short_description=p12@SH2D3C | ||
}} | }} |
Revision as of 22:25, 15 November 2012
Short description: | p12@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SH2D3C_5end |
Coexpression cluster: | C2448_lung_heart_adipose_uterus_spleen_penis_diaphragm |
Association with transcript: | 0bp_to_ENST00000464239_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.28e-19 | 36 |
meso-epithelial cell | 9.88e-15 | 45 |
endothelial cell of vascular tree | 4.16e-13 | 24 |
endothelial cell of sinusoid | 5.53e-12 | 2 |
endothelial cell of hepatic sinusoid | 5.53e-12 | 2 |
lining cell | 6.59e-11 | 58 |
barrier cell | 6.59e-11 | 58 |
blood vessel endothelial cell | 2.42e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.42e-10 | 18 |
vein endothelial cell | 8.58e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.71e-12 | 2 |
vascular disease | 6.60e-07 | 1 |
ischemia | 6.60e-07 | 1 |
extrinsic cardiomyopathy | 6.60e-07 | 1 |
myocardial ischemia | 6.60e-07 | 1 |
myocardial infarction | 6.60e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.