FFCP PHASE1:Hg19::chr1:75600979..75601005,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0002556!6.16e-25!6;CL:0002552!3.68e-19!5;CL:0000057!1.88e-12!75;CL:0002580!4.67e-09!3 | |ontology_enrichment_celltype=CL:0002556!6.16e-25!6;CL:0002552!3.68e-19!5;CL:0000057!1.88e-12!75;CL:0002580!4.67e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002556;4.59e-23;6!CL:0002580;2.89e-12;3!CL:0002552;7.01e-08;5 | |ontology_enrichment_celltype_v019=CL:0002556;4.59e-23;6!CL:0002580;2.89e-12;3!CL:0002552;7.01e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002556,4.34e-23,6;CL:0002580,3.24e-12,3;CL:0002552,6.55e-08,5;CL:0000057,1.66e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5662!5.14e-07!1 | |ontology_enrichment_disease=DOID:5662!5.14e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!6.16e-25!6;UBERON:0003672!6.16e-25!6;UBERON:0003129!7.15e-19!11;UBERON:0000075!6.94e-16!13;UBERON:0005944!6.94e-16!13;UBERON:0004288!6.94e-16!13;UBERON:0003089!6.94e-16!13;UBERON:0000165!9.97e-16!28;UBERON:0000930!9.97e-16!28;UBERON:0001828!4.94e-12!8;UBERON:0001444!1.54e-08!48;UBERON:0000078!3.76e-08!18;UBERON:0001282!1.55e-07!1;UBERON:0009842!1.55e-07!1;UBERON:0003704!1.55e-07!1;UBERON:0001171!1.55e-07!1;UBERON:0001172!1.55e-07!1;UBERON:0000153!8.40e-07!129;UBERON:0007811!8.40e-07!129 | |ontology_enrichment_uberon=UBERON:0001758!6.16e-25!6;UBERON:0003672!6.16e-25!6;UBERON:0003129!7.15e-19!11;UBERON:0000075!6.94e-16!13;UBERON:0005944!6.94e-16!13;UBERON:0004288!6.94e-16!13;UBERON:0003089!6.94e-16!13;UBERON:0000165!9.97e-16!28;UBERON:0000930!9.97e-16!28;UBERON:0001828!4.94e-12!8;UBERON:0001444!1.54e-08!48;UBERON:0000078!3.76e-08!18;UBERON:0001282!1.55e-07!1;UBERON:0009842!1.55e-07!1;UBERON:0003704!1.55e-07!1;UBERON:0001171!1.55e-07!1;UBERON:0001172!1.55e-07!1;UBERON:0000153!8.40e-07!129;UBERON:0007811!8.40e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.18e-34;1!UBERON:0009842;2.18e-34;1!UBERON:0003704;2.18e-34;1!UBERON:0001171;2.18e-34;1!UBERON:0001172;2.18e-34;1!UBERON:0001758;4.59e-23;6!UBERON:0003672;4.59e-23;6!UBERON:0003129;6.18e-20;7!UBERON:0011137;4.38e-13;11!UBERON:0010323;4.38e-13;11!UBERON:0001280;1.96e-12;3!UBERON:0004647;1.96e-12;3!UBERON:0000165;2.17e-11;28!UBERON:0002394;1.17e-09;4!UBERON:0003928;1.17e-09;4!UBERON:0000075;2.60e-09;16 | |ontology_enrichment_uberon_v019=UBERON:0001282;2.18e-34;1!UBERON:0009842;2.18e-34;1!UBERON:0003704;2.18e-34;1!UBERON:0001171;2.18e-34;1!UBERON:0001172;2.18e-34;1!UBERON:0001758;4.59e-23;6!UBERON:0003672;4.59e-23;6!UBERON:0003129;6.18e-20;7!UBERON:0011137;4.38e-13;11!UBERON:0010323;4.38e-13;11!UBERON:0001280;1.96e-12;3!UBERON:0004647;1.96e-12;3!UBERON:0000165;2.17e-11;28!UBERON:0002394;1.17e-09;4!UBERON:0003928;1.17e-09;4!UBERON:0000075;2.60e-09;16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.58e-34,1;UBERON:0009842,2.58e-34,1;UBERON:0003704,2.58e-34,1;UBERON:0001171,2.58e-34,1;UBERON:0001172,2.58e-34,1;UBERON:0001758,4.34e-23,6;UBERON:0003672,4.34e-23,6;UBERON:0003129,5.89e-20,7;UBERON:0010323,4.25e-13,11;UBERON:0001280,2.07e-12,3;UBERON:0004647,2.07e-12,3;UBERON:0005171,2.07e-12,3;UBERON:0000165,4.80e-11,29;UBERON:0000930,4.80e-11,29;UBERON:0011137,1.64e-10,14;UBERON:0000075,2.55e-09,16;UBERON:0002394,7.58e-07,6;UBERON:0003928,7.58e-07,6;UBERON:0001444,8.07e-07,49 | |||
|phase1_expression=0.908391896352783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619412741790207,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.368502951935304,0.723280468230358,0,1.7308685049499,0,0,0.673344455816265,0.500474079487857,0.554128230968366,0,5.51678032438235,2.55404700141215,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,0.920771839728375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46921868065606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0.801652215796681,0.18378979906969,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.908391896352783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619412741790207,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.368502951935304,0.723280468230358,0,1.7308685049499,0,0,0.673344455816265,0.500474079487857,0.554128230968366,0,5.51678032438235,2.55404700141215,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,0.920771839728375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46921868065606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0.801652215796681,0.18378979906969,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:75600979..75601005,+ | |short_description=p@chr1:75600979..75601005,+ | ||
}} | }} |
Revision as of 17:38, 17 November 2012
Short description: | p@chr1:75600979..75601005, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:75600979..75601005, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 4.34e-23 | 6 |
preadipocyte of the breast | 3.24e-12 | 3 |
fibroblast of gingiva | 6.55e-08 | 5 |
fibroblast | 1.66e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.58e-34 | 1 |
acinus | 2.58e-34 | 1 |
intrahepatic bile duct | 2.58e-34 | 1 |
portal lobule | 2.58e-34 | 1 |
hepatic acinus | 2.58e-34 | 1 |
periodontium | 4.34e-23 | 6 |
dentition | 4.34e-23 | 6 |
skull | 5.89e-20 | 7 |
cranial skeletal system | 4.25e-13 | 11 |
liver parenchyma | 2.07e-12 | 3 |
liver lobule | 2.07e-12 | 3 |
hepatic duct | 2.07e-12 | 3 |
mouth | 4.80e-11 | 29 |
stomodeum | 4.80e-11 | 29 |
axial skeletal system | 1.64e-10 | 14 |
subdivision of skeletal system | 2.55e-09 | 16 |
bile duct | 7.58e-07 | 6 |
digestive system duct | 7.58e-07 | 6 |
subdivision of head | 8.07e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.