FFCP PHASE1:Hg19::chr5:180258743..180258757,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002194!3.12e-11!63;CL:0000576!3.12e-11!63;CL:0000040!3.12e-11!63;CL:0000559!3.12e-11!63;CL:0002087!6.20e-11!119;CL:0002009!3.03e-10!65;CL:0002057!3.57e-10!42;CL:0000037!1.18e-09!172;CL:0000566!1.18e-09!172;CL:0000988!2.26e-09!182;CL:0002032!2.81e-09!165;CL:0000837!2.81e-09!165;CL:0000860!3.18e-09!45;CL:0000839!5.95e-09!70;CL:0000763!1.64e-08!112;CL:0000049!1.64e-08!112;CL:0000557!3.67e-08!71;CL:0002031!4.14e-08!124;CL:0000738!5.84e-08!140;CL:0000766!4.43e-07!76;CL:0002393!7.72e-07!9;CL:0002397!7.72e-07!9 | |ontology_enrichment_celltype=CL:0002194!3.12e-11!63;CL:0000576!3.12e-11!63;CL:0000040!3.12e-11!63;CL:0000559!3.12e-11!63;CL:0002087!6.20e-11!119;CL:0002009!3.03e-10!65;CL:0002057!3.57e-10!42;CL:0000037!1.18e-09!172;CL:0000566!1.18e-09!172;CL:0000988!2.26e-09!182;CL:0002032!2.81e-09!165;CL:0000837!2.81e-09!165;CL:0000860!3.18e-09!45;CL:0000839!5.95e-09!70;CL:0000763!1.64e-08!112;CL:0000049!1.64e-08!112;CL:0000557!3.67e-08!71;CL:0002031!4.14e-08!124;CL:0000738!5.84e-08!140;CL:0000766!4.43e-07!76;CL:0002393!7.72e-07!9;CL:0002397!7.72e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000875;4.43e-10;3!CL:0002396;4.43e-10;3!CL:0000576;1.69e-09;48!CL:0000990;4.07e-08;8!CL:0002393;4.82e-08;6!CL:0002397;4.82e-08;6!CL:0000860;1.83e-07;33!CL:0002057;1.83e-07;33 | |ontology_enrichment_celltype_v019=CL:0000875;4.43e-10;3!CL:0002396;4.43e-10;3!CL:0000576;1.69e-09;48!CL:0000990;4.07e-08;8!CL:0002393;4.82e-08;6!CL:0002397;4.82e-08;6!CL:0000860;1.83e-07;33!CL:0002057;1.83e-07;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.61e-17,42;CL:0002057,1.61e-17,42;CL:0002194,2.19e-17,59;CL:0000576,2.19e-17,59;CL:0000040,2.19e-17,59;CL:0000559,2.19e-17,59;CL:0000763,5.22e-17,108;CL:0000049,5.22e-17,108;CL:0002009,1.23e-16,61;CL:0000037,1.33e-16,168;CL:0002032,1.37e-16,161;CL:0000837,1.37e-16,161;CL:0000473,1.49e-16,48;CL:0000234,1.49e-16,48;CL:0000988,2.94e-16,177;CL:0002393,2.53e-15,9;CL:0002397,2.53e-15,9;CL:0000839,5.83e-15,66;CL:0000557,1.18e-14,67;CL:0002087,4.11e-14,115;CL:0000766,2.93e-13,72;CL:0002031,3.27e-13,120;CL:0000738,6.66e-13,136;CL:0000875,5.14e-10,3;CL:0002396,5.14e-10,3;CL:0000990,2.49e-08,8;CL:0000451,9.86e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.25e-13;42!CL:0000049;3.62e-07;108 | |ontology_enrichment_development_v019=CL:0002057;3.25e-13;42!CL:0000049;3.62e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.91e-07;2!DOID:0060058;5.42e-07;10 | |ontology_enrichment_disease_v019=DOID:3493;1.91e-07;2!DOID:0060058;5.42e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.60e-07,51;DOID:0060083,1.60e-07,51;DOID:3493,1.82e-07,2;DOID:0060058,5.89e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.93e-08!80;UBERON:0002390!2.93e-07!102;UBERON:0003061!2.93e-07!102;UBERON:0001474!6.66e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!4.93e-08!80;UBERON:0002390!2.93e-07!102;UBERON:0003061!2.93e-07!102;UBERON:0001474!6.66e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.93e-15,76;UBERON:0001474,1.39e-13,82;UBERON:0004765,5.52e-13,90;UBERON:0002390,1.45e-11,98;UBERON:0003061,1.45e-11,98;UBERON:0002405,2.81e-11,93;UBERON:0001434,4.51e-11,100;UBERON:0002193,6.21e-10,108 | |||
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| ||
|short_description=p3@LOC729678 | |short_description=p3@LOC729678 | ||
}} | }} |
Revision as of 13:43, 18 November 2012
Short description: | p3@LOC729678 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOC729678_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_uc003mml.3_5end |
EntrezGene: | LOC729678 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.61e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.61e-17 | 42 |
monopoietic cell | 2.19e-17 | 59 |
monocyte | 2.19e-17 | 59 |
monoblast | 2.19e-17 | 59 |
promonocyte | 2.19e-17 | 59 |
myeloid cell | 5.22e-17 | 108 |
common myeloid progenitor | 5.22e-17 | 108 |
macrophage dendritic cell progenitor | 1.23e-16 | 61 |
hematopoietic stem cell | 1.33e-16 | 168 |
hematopoietic oligopotent progenitor cell | 1.37e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-16 | 161 |
defensive cell | 1.49e-16 | 48 |
phagocyte | 1.49e-16 | 48 |
hematopoietic cell | 2.94e-16 | 177 |
intermediate monocyte | 2.53e-15 | 9 |
CD14-positive, CD16-positive monocyte | 2.53e-15 | 9 |
myeloid lineage restricted progenitor cell | 5.83e-15 | 66 |
granulocyte monocyte progenitor cell | 1.18e-14 | 67 |
nongranular leukocyte | 4.11e-14 | 115 |
myeloid leukocyte | 2.93e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 3.27e-13 | 120 |
leukocyte | 6.66e-13 | 136 |
non-classical monocyte | 5.14e-10 | 3 |
CD14-low, CD16-positive monocyte | 5.14e-10 | 3 |
conventional dendritic cell | 2.49e-08 | 8 |
dendritic cell | 9.86e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.93e-15 | 76 |
bone element | 1.39e-13 | 82 |
skeletal element | 5.52e-13 | 90 |
hematopoietic system | 1.45e-11 | 98 |
blood island | 1.45e-11 | 98 |
immune system | 2.81e-11 | 93 |
skeletal system | 4.51e-11 | 100 |
hemolymphoid system | 6.21e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.60e-07 | 51 |
immune system cancer | 1.60e-07 | 51 |
signet ring cell adenocarcinoma | 1.82e-07 | 2 |
lymphoma | 5.89e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.