FFCP PHASE1:Hg19::chr15:53082521..53082549,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000148!3.19e-08!10;CL:0000541!3.19e-08!10;CL:0002322!6.10e-08!5 | |ontology_enrichment_celltype=CL:0000148!3.19e-08!10;CL:0000541!3.19e-08!10;CL:0002322!6.10e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.23e-16;12!CL:0002322;1.06e-12;5!CL:0000123;3.54e-09;2!CL:0000242;3.54e-09;2 | |ontology_enrichment_celltype_v019=CL:0000182;2.23e-16;12!CL:0002322;1.06e-12;5!CL:0000123;3.54e-09;2!CL:0000242;3.54e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.24e-16,12;CL:0002322,1.22e-12,5;CL:0000242,3.62e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009497;4.47e-19;13!UBERON:0004161;8.21e-18;11!UBERON:0006215;8.41e-12;3!UBERON:0001041;3.13e-09;30 | |ontology_enrichment_development_v019=UBERON:0009497;4.47e-19;13!UBERON:0004161;8.21e-18;11!UBERON:0006215;8.41e-12;3!UBERON:0001041;3.13e-09;30 | ||
|ontology_enrichment_disease=DOID:305!2.84e-08!106;DOID:0050687!3.26e-07!143 | |ontology_enrichment_disease=DOID:305!2.84e-08!106;DOID:0050687!3.26e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.28e-14!57;UBERON:0005068!3.28e-14!57;UBERON:0006241!3.28e-14!57;UBERON:0007135!3.28e-14!57;UBERON:0001017!9.13e-14!82;UBERON:0005743!1.09e-13!86;UBERON:0000073!2.74e-12!94;UBERON:0001016!2.74e-12!94;UBERON:0000955!9.98e-12!69;UBERON:0006238!9.98e-12!69;UBERON:0002616!2.78e-11!59;UBERON:0002020!1.75e-10!34;UBERON:0003528!1.75e-10!34;UBERON:0001893!5.75e-10!34;UBERON:0002619!6.04e-10!22;UBERON:0001950!1.25e-09!20;UBERON:0003075!1.83e-09!86;UBERON:0007284!1.83e-09!86;UBERON:0007023!2.05e-09!115;UBERON:0002791!2.47e-09!33;UBERON:0002346!1.19e-08!90;UBERON:0001869!1.59e-08!32;UBERON:0002780!1.83e-08!41;UBERON:0001890!1.83e-08!41;UBERON:0006240!1.83e-08!41;UBERON:0009497!2.30e-08!25;UBERON:0000015!2.30e-08!25;UBERON:0002423!2.30e-08!25;UBERON:0006235!2.30e-08!25;UBERON:0004161!2.30e-08!25;UBERON:0000956!2.43e-08!25;UBERON:0000203!2.43e-08!25;UBERON:0003076!2.98e-08!15;UBERON:0003057!2.98e-08!15;UBERON:0003080!3.84e-08!42;UBERON:0002107!3.70e-07!19;UBERON:0006925!3.70e-07!19;UBERON:0008836!3.70e-07!19;UBERON:0008835!4.04e-07!22;UBERON:0003894!4.04e-07!22;UBERON:0004733!4.36e-07!12;UBERON:0002028!4.36e-07!12;UBERON:0007277!4.36e-07!12 | |ontology_enrichment_uberon=UBERON:0001049!3.28e-14!57;UBERON:0005068!3.28e-14!57;UBERON:0006241!3.28e-14!57;UBERON:0007135!3.28e-14!57;UBERON:0001017!9.13e-14!82;UBERON:0005743!1.09e-13!86;UBERON:0000073!2.74e-12!94;UBERON:0001016!2.74e-12!94;UBERON:0000955!9.98e-12!69;UBERON:0006238!9.98e-12!69;UBERON:0002616!2.78e-11!59;UBERON:0002020!1.75e-10!34;UBERON:0003528!1.75e-10!34;UBERON:0001893!5.75e-10!34;UBERON:0002619!6.04e-10!22;UBERON:0001950!1.25e-09!20;UBERON:0003075!1.83e-09!86;UBERON:0007284!1.83e-09!86;UBERON:0007023!2.05e-09!115;UBERON:0002791!2.47e-09!33;UBERON:0002346!1.19e-08!90;UBERON:0001869!1.59e-08!32;UBERON:0002780!1.83e-08!41;UBERON:0001890!1.83e-08!41;UBERON:0006240!1.83e-08!41;UBERON:0009497!2.30e-08!25;UBERON:0000015!2.30e-08!25;UBERON:0002423!2.30e-08!25;UBERON:0006235!2.30e-08!25;UBERON:0004161!2.30e-08!25;UBERON:0000956!2.43e-08!25;UBERON:0000203!2.43e-08!25;UBERON:0003076!2.98e-08!15;UBERON:0003057!2.98e-08!15;UBERON:0003080!3.84e-08!42;UBERON:0002107!3.70e-07!19;UBERON:0006925!3.70e-07!19;UBERON:0008836!3.70e-07!19;UBERON:0008835!4.04e-07!22;UBERON:0003894!4.04e-07!22;UBERON:0004733!4.36e-07!12;UBERON:0002028!4.36e-07!12;UBERON:0007277!4.36e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;6.18e-18;25!UBERON:0002107;2.02e-16;19!UBERON:0006925;2.02e-16;19!UBERON:0002680;2.94e-10;9!UBERON:0001895;2.94e-10;9!UBERON:0002365;3.82e-09;31!UBERON:0002330;3.82e-09;31!UBERON:0002148;1.44e-08;2!UBERON:0006331;1.44e-08;2!UBERON:0009662;1.44e-08;2!UBERON:0002368;5.51e-08;33!UBERON:0004733;1.26e-07;12!UBERON:0002028;1.26e-07;12!UBERON:0004732;5.13e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0002423;6.18e-18;25!UBERON:0002107;2.02e-16;19!UBERON:0006925;2.02e-16;19!UBERON:0002680;2.94e-10;9!UBERON:0001895;2.94e-10;9!UBERON:0002365;3.82e-09;31!UBERON:0002330;3.82e-09;31!UBERON:0002148;1.44e-08;2!UBERON:0006331;1.44e-08;2!UBERON:0009662;1.44e-08;2!UBERON:0002368;5.51e-08;33!UBERON:0004733;1.26e-07;12!UBERON:0002028;1.26e-07;12!UBERON:0004732;5.13e-07;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,5.45e-18,25;UBERON:0000015,5.45e-18,25;UBERON:0002423,5.45e-18,25;UBERON:0006235,5.45e-18,25;UBERON:0004161,5.45e-18,25;UBERON:0008835,4.65e-17,22;UBERON:0003894,4.65e-17,22;UBERON:0002107,2.02e-16,19;UBERON:0006925,2.02e-16,19;UBERON:0008836,2.02e-16,19;UBERON:0009854,3.17e-16,23;UBERON:0007499,9.25e-15,25;UBERON:0009856,4.11e-14,26;UBERON:0002680,2.72e-10,9;UBERON:0001895,2.72e-10,9;UBERON:0010092,2.72e-10,9;UBERON:0003929,6.09e-10,54;UBERON:0002365,2.19e-09,31;UBERON:0002330,2.19e-09,31;UBERON:0002148,1.28e-08,2;UBERON:0006331,1.28e-08,2;UBERON:0009662,1.28e-08,2;UBERON:0002368,4.06e-08,35;UBERON:0005911,1.11e-07,82;UBERON:0004733,1.19e-07,12;UBERON:0002028,1.19e-07,12;UBERON:0007277,1.19e-07,12;UBERON:0000949,2.09e-07,45;UBERON:0004732,4.86e-07,13 | |||
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| ||
|short_description=p1@ONECUT1 | |short_description=p1@ONECUT1 | ||
}} | }} |
Revision as of 14:14, 18 November 2012
Short description: | p1@ONECUT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ONECUT1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -312bp_to_ENST00000305901, NM_004498, uc002aci.1_5end |
EntrezGene: | ONECUT1 |
HGNC: | 8138 |
UniProt: | Q9UBC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.24e-16 | 12 |
embryonic stem cell | 1.22e-12 | 5 |
Merkel cell | 3.62e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 5.45e-18 | 25 |
anatomical boundary | 5.45e-18 | 25 |
hepatobiliary system | 5.45e-18 | 25 |
foregut-midgut junction | 5.45e-18 | 25 |
septum transversum | 5.45e-18 | 25 |
hepatic diverticulum | 4.65e-17 | 22 |
liver primordium | 4.65e-17 | 22 |
liver | 2.02e-16 | 19 |
digestive gland | 2.02e-16 | 19 |
liver bud | 2.02e-16 | 19 |
digestive tract diverticulum | 3.17e-16 | 23 |
epithelial sac | 9.25e-15 | 25 |
sac | 4.11e-14 | 26 |
regional part of metencephalon | 2.72e-10 | 9 |
metencephalon | 2.72e-10 | 9 |
future metencephalon | 2.72e-10 | 9 |
gut epithelium | 6.09e-10 | 54 |
exocrine gland | 2.19e-09 | 31 |
exocrine system | 2.19e-09 | 31 |
locus ceruleus | 1.28e-08 | 2 |
brainstem nucleus | 1.28e-08 | 2 |
hindbrain nucleus | 1.28e-08 | 2 |
endocrine gland | 4.06e-08 | 35 |
endo-epithelium | 1.11e-07 | 82 |
segmental subdivision of hindbrain | 1.19e-07 | 12 |
hindbrain | 1.19e-07 | 12 |
presumptive hindbrain | 1.19e-07 | 12 |
endocrine system | 2.09e-07 | 45 |
segmental subdivision of nervous system | 4.86e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.