FFCP PHASE1:Hg19::chr4:88928828..88928841,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002334!2.27e-10!12;CL:0000136!1.58e-09!15 | |ontology_enrichment_celltype=CL:0002334!2.27e-10!12;CL:0000136!1.58e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.29e-25;12!CL:0002615;7.18e-20;3!CL:0002579;7.41e-20;3!CL:0002580;5.76e-19;3!CL:0000136;3.92e-17;13!CL:0002617;1.82e-13;2!CL:0000197;9.25e-10;6!CL:0000098;9.25e-10;6!CL:0002167;9.25e-10;6!CL:0002616;6.59e-08;1!CL:0002581;8.26e-08;1!CL:1000306;8.19e-07;4!CL:0002547;8.19e-07;4 | |ontology_enrichment_celltype_v019=CL:0002334;8.29e-25;12!CL:0002615;7.18e-20;3!CL:0002579;7.41e-20;3!CL:0002580;5.76e-19;3!CL:0000136;3.92e-17;13!CL:0002617;1.82e-13;2!CL:0000197;9.25e-10;6!CL:0000098;9.25e-10;6!CL:0002167;9.25e-10;6!CL:0002616;6.59e-08;1!CL:0002581;8.26e-08;1!CL:1000306;8.19e-07;4!CL:0002547;8.19e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.92e-25,12;CL:0002579,6.97e-20,3;CL:0002615,7.42e-20,3;CL:0000136,1.31e-19,15;CL:0002580,3.32e-19,3;CL:0002617,2.06e-13,2;CL:0000197,8.72e-10,6;CL:0000098,8.72e-10,6;CL:0002167,8.72e-10,6;CL:0002616,6.59e-08,1;CL:0002581,8.54e-08,1;CL:1000306,9.78e-07,4;CL:0002547,9.78e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.19e-07;4!UBERON:0007284;8.19e-07;4 | |ontology_enrichment_development_v019=UBERON:0005062;8.19e-07;4!UBERON:0007284;8.19e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;1.72e-07;1!DOID:4235;3.20e-07;1 | |ontology_enrichment_disease_v019=DOID:2513;1.72e-07;1!DOID:4235;3.20e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,1.51e-07,1;DOID:4235,2.50e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.19e-09!6;UBERON:0002358!1.19e-09!6;UBERON:0003684!1.19e-09!6;UBERON:0001178!1.19e-09!6 | |ontology_enrichment_uberon=UBERON:0003688!1.19e-09!6;UBERON:0002358!1.19e-09!6;UBERON:0003684!1.19e-09!6;UBERON:0001178!1.19e-09!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.36e-38;6!UBERON:0002358;6.36e-38;6!UBERON:0003684;6.36e-38;6!UBERON:0001178;6.36e-38;6!UBERON:0004457;3.99e-25;9!UBERON:0000042;3.99e-25;9!UBERON:0000310;2.98e-15;10!UBERON:0005406;5.00e-14;2!UBERON:0001443;7.55e-14;11!UBERON:0003978;8.23e-09;3!UBERON:0000946;8.23e-09;3!UBERON:0006834;3.20e-07;1!UBERON:0002135;3.20e-07;1!UBERON:0002146;3.20e-07;1!UBERON:0005623;3.20e-07;1!UBERON:0004797;8.19e-07;4!UBERON:0000415;8.19e-07;4!UBERON:0007240;8.19e-07;4!UBERON:0005742;8.19e-07;4!UBERON:0005734;8.19e-07;4!UBERON:0004664;8.19e-07;4!UBERON:0004663;8.19e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0003688;6.36e-38;6!UBERON:0002358;6.36e-38;6!UBERON:0003684;6.36e-38;6!UBERON:0001178;6.36e-38;6!UBERON:0004457;3.99e-25;9!UBERON:0000042;3.99e-25;9!UBERON:0000310;2.98e-15;10!UBERON:0005406;5.00e-14;2!UBERON:0001443;7.55e-14;11!UBERON:0003978;8.23e-09;3!UBERON:0000946;8.23e-09;3!UBERON:0006834;3.20e-07;1!UBERON:0002135;3.20e-07;1!UBERON:0002146;3.20e-07;1!UBERON:0005623;3.20e-07;1!UBERON:0004797;8.19e-07;4!UBERON:0000415;8.19e-07;4!UBERON:0007240;8.19e-07;4!UBERON:0005742;8.19e-07;4!UBERON:0005734;8.19e-07;4!UBERON:0004664;8.19e-07;4!UBERON:0004663;8.19e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.18e-38,6;UBERON:0002358,6.18e-38,6;UBERON:0003684,6.18e-38,6;UBERON:0001178,6.18e-38,6;UBERON:0004457,1.02e-18,12;UBERON:0000042,1.02e-18,12;UBERON:0000310,2.42e-15,10;UBERON:0005406,5.17e-14,2;UBERON:0001443,6.25e-14,11;UBERON:0004797,1.30e-13,7;UBERON:0004923,4.95e-11,66;UBERON:0003978,7.91e-09,3;UBERON:0009751,7.91e-09,3;UBERON:0000946,7.91e-09,3;UBERON:0002523,7.91e-09,3;UBERON:0005983,7.91e-09,3;UBERON:0002165,7.91e-09,3;UBERON:0002062,7.91e-09,3;UBERON:0007280,7.91e-09,3;UBERON:0002146,2.21e-07,1;UBERON:0005623,2.21e-07,1;UBERON:0006834,2.66e-07,1;UBERON:0002135,4.34e-07,1;UBERON:0000415,9.78e-07,4;UBERON:0007240,9.78e-07,4;UBERON:0005742,9.78e-07,4;UBERON:0005734,9.78e-07,4;UBERON:0004664,9.78e-07,4;UBERON:0004663,9.78e-07,4 | |||
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| ||
|short_description=p3@PKD2 | |short_description=p3@PKD2 | ||
}} | }} |
Revision as of 02:41, 19 November 2012
Short description: | p3@PKD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PKD2_5end |
Coexpression cluster: | C470_Adipocyte_Preadipocyte_Smooth_Fibroblast_aorta_normal_Mesenchymal |
Association with transcript: | 8bp_to_ENST00000237596, uc003hre.2_5end |
EntrezGene: | PKD2 |
HGNC: | 9009 |
UniProt: | Q13563 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.92e-25 | 12 |
omentum preadipocyte | 6.97e-20 | 3 |
adipocyte of omentum tissue | 7.42e-20 | 3 |
fat cell | 1.31e-19 | 15 |
preadipocyte of the breast | 3.32e-19 | 3 |
adipocyte of breast | 2.06e-13 | 2 |
receptor cell | 8.72e-10 | 6 |
sensory epithelial cell | 8.72e-10 | 6 |
olfactory epithelial cell | 8.72e-10 | 6 |
perirenal adipocyte cell | 6.59e-08 | 1 |
perirenal preadipocyte | 8.54e-08 | 1 |
fibroblast of tunica adventitia of artery | 9.78e-07 | 4 |
fibroblast of the aortic adventitia | 9.78e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.18e-38 | 6 |
peritoneum | 6.18e-38 | 6 |
abdominal cavity | 6.18e-38 | 6 |
visceral peritoneum | 6.18e-38 | 6 |
cavity lining | 1.02e-18 | 12 |
serous membrane | 1.02e-18 | 12 |
breast | 2.42e-15 | 10 |
perirenal fat | 5.17e-14 | 2 |
chest | 6.25e-14 | 11 |
blood vessel layer | 1.30e-13 | 7 |
organ component layer | 4.95e-11 | 66 |
valve | 7.91e-09 | 3 |
cardiac mesenchyme | 7.91e-09 | 3 |
cardial valve | 7.91e-09 | 3 |
tunica intima | 7.91e-09 | 3 |
heart layer | 7.91e-09 | 3 |
endocardium | 7.91e-09 | 3 |
endocardial cushion | 7.91e-09 | 3 |
presumptive endocardium | 7.91e-09 | 3 |
pulmonary valve | 2.21e-07 | 1 |
semi-lunar valve | 2.21e-07 | 1 |
uterus or analog | 2.66e-07 | 1 |
mitral valve | 4.34e-07 | 1 |
artery wall | 9.78e-07 | 4 |
tunica adventitia of artery | 9.78e-07 | 4 |
adventitia | 9.78e-07 | 4 |
tunica adventitia of blood vessel | 9.78e-07 | 4 |
aorta tunica adventitia | 9.78e-07 | 4 |
aorta wall | 9.78e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.51e-07 | 1 |
spindle cell sarcoma | 2.50e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.