FFCP PHASE1:Hg19::chr3:196366546..196366553,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!3.52e-41!172;CL:0000566!3.52e-41!172;CL:0000988!1.19e-40!182;CL:0002032!3.06e-37!165;CL:0000837!3.06e-37!165;CL:0000738!1.81e-22!140;CL:0000763!5.77e-22!112;CL:0000049!5.77e-22!112;CL:0002087!2.55e-21!119;CL:0002031!1.88e-20!124;CL:0000542!4.84e-14!53;CL:0000051!4.84e-14!53;CL:0000838!3.31e-13!52;CL:0000134!7.84e-10!358;CL:0002320!3.34e-09!365;CL:0000219!5.22e-09!390;CL:0000839!6.62e-09!70;CL:0000451!7.41e-08!10;CL:0000084!1.41e-07!25;CL:0000827!1.41e-07!25;CL:0002194!1.68e-07!63;CL:0000576!1.68e-07!63;CL:0000040!1.68e-07!63;CL:0000559!1.68e-07!63;CL:0000557!2.88e-07!71;CL:0002009!4.51e-07!65 | |ontology_enrichment_celltype=CL:0000037!3.52e-41!172;CL:0000566!3.52e-41!172;CL:0000988!1.19e-40!182;CL:0002032!3.06e-37!165;CL:0000837!3.06e-37!165;CL:0000738!1.81e-22!140;CL:0000763!5.77e-22!112;CL:0000049!5.77e-22!112;CL:0002087!2.55e-21!119;CL:0002031!1.88e-20!124;CL:0000542!4.84e-14!53;CL:0000051!4.84e-14!53;CL:0000838!3.31e-13!52;CL:0000134!7.84e-10!358;CL:0002320!3.34e-09!365;CL:0000219!5.22e-09!390;CL:0000839!6.62e-09!70;CL:0000451!7.41e-08!10;CL:0000084!1.41e-07!25;CL:0000827!1.41e-07!25;CL:0002194!1.68e-07!63;CL:0000576!1.68e-07!63;CL:0000040!1.68e-07!63;CL:0000559!1.68e-07!63;CL:0000557!2.88e-07!71;CL:0002009!4.51e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000990;1.78e-15;8!CL:0000451;1.25e-12;10!CL:0000235;5.25e-09;6!CL:0000840;5.25e-09;5 | |ontology_enrichment_celltype_v019=CL:0000990;1.78e-15;8!CL:0000451;1.25e-12;10!CL:0000235;5.25e-09;6!CL:0000840;5.25e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.24e-23,168;CL:0002032,1.87e-22,161;CL:0000837,1.87e-22,161;CL:0000988,9.42e-22,177;CL:0000763,7.59e-19,108;CL:0000049,7.59e-19,108;CL:0000990,1.42e-15,8;CL:0000451,1.04e-12,10;CL:0000840,5.05e-09,5;CL:0001029,5.05e-09,5;CL:0000235,6.31e-09,6;CL:0000134,5.20e-08,354;CL:0002320,9.64e-08,361;CL:0000738,2.29e-07,136;CL:0000219,8.48e-07,386 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!7.56e-33!51;DOID:0060083!7.56e-33!51;DOID:1240!1.10e-32!39;DOID:8692!2.90e-25!31;DOID:1036!4.61e-09!8;DOID:0050686!7.32e-07!137 | |ontology_enrichment_disease=DOID:2531!7.56e-33!51;DOID:0060083!7.56e-33!51;DOID:1240!1.10e-32!39;DOID:8692!2.90e-25!31;DOID:1036!4.61e-09!8;DOID:0050686!7.32e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.69e-28;31!DOID:1240;5.72e-28;39!DOID:2531;1.30e-20;51!DOID:0060083;1.30e-20;51!DOID:1036;4.03e-12;8!DOID:630;5.94e-07;1!DOID:0050177;5.94e-07;1!DOID:0050427;5.94e-07;1 | |ontology_enrichment_disease_v019=DOID:8692;1.69e-28;31!DOID:1240;5.72e-28;39!DOID:2531;1.30e-20;51!DOID:0060083;1.30e-20;51!DOID:1036;4.03e-12;8!DOID:630;5.94e-07;1!DOID:0050177;5.94e-07;1!DOID:0050427;5.94e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,5.12e-40,39;DOID:2531,1.19e-33,51;DOID:0060083,1.19e-33,51;DOID:8692,2.28e-29,31;DOID:1036,3.50e-12,8;DOID:0050686,2.75e-11,137;DOID:630,5.78e-07,1;DOID:0050177,5.78e-07,1;DOID:0050427,5.78e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.19e-14!102;UBERON:0003061!2.19e-14!102;UBERON:0002193!5.66e-12!112;UBERON:0002384!1.00e-09!375;UBERON:0004177!2.61e-08!7;UBERON:0000178!4.34e-07!15;UBERON:0000179!4.34e-07!15;UBERON:0000463!4.34e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.19e-14!102;UBERON:0003061!2.19e-14!102;UBERON:0002193!5.66e-12!112;UBERON:0002384!1.00e-09!375;UBERON:0004177!2.61e-08!7;UBERON:0000178!4.34e-07!15;UBERON:0000179!4.34e-07!15;UBERON:0000463!4.34e-07!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.50e-08,371 | |||
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| ||
|short_description=p4@LRRC33 | |short_description=p4@LRRC33 | ||
}} | }} |
Revision as of 04:31, 19 November 2012
Short description: | p4@LRRC33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LRRC33_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000328557_5end |
EntrezGene: | LRRC33 |
HGNC: | 24613 |
UniProt: | Q86YC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.24e-23 | 168 |
hematopoietic oligopotent progenitor cell | 1.87e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-22 | 161 |
hematopoietic cell | 9.42e-22 | 177 |
myeloid cell | 7.59e-19 | 108 |
common myeloid progenitor | 7.59e-19 | 108 |
conventional dendritic cell | 1.42e-15 | 8 |
dendritic cell | 1.04e-12 | 10 |
immature conventional dendritic cell | 5.05e-09 | 5 |
common dendritic progenitor | 5.05e-09 | 5 |
macrophage | 6.31e-09 | 6 |
mesenchymal cell | 5.20e-08 | 354 |
connective tissue cell | 9.64e-08 | 361 |
leukocyte | 2.29e-07 | 136 |
motile cell | 8.48e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.50e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.12e-40 | 39 |
hematologic cancer | 1.19e-33 | 51 |
immune system cancer | 1.19e-33 | 51 |
myeloid leukemia | 2.28e-29 | 31 |
chronic leukemia | 3.50e-12 | 8 |
organ system cancer | 2.75e-11 | 137 |
genetic disease | 5.78e-07 | 1 |
monogenic disease | 5.78e-07 | 1 |
xeroderma pigmentosum | 5.78e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.