FFCP PHASE1:Hg19::chr17:10560619..10560631,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000188!2.26e-17!9;CL:0000594!2.73e-08!3;CL:0000680!8.54e-07!57;CL:0000056!8.54e-07!57;CL:0000355!8.54e-07!57 | |ontology_enrichment_celltype=CL:0000188!2.26e-17!9;CL:0000594!2.73e-08!3;CL:0000680!8.54e-07!57;CL:0000056!8.54e-07!57;CL:0000355!8.54e-07!57 | ||
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|ontology_enrichment_development_v019=CL:0000355;2.28e-07;58 | |ontology_enrichment_development_v019=CL:0000355;2.28e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@MYH3 | |short_description=p1@MYH3 | ||
}} | }} |
Revision as of 11:01, 20 November 2012
Short description: | p1@MYH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MYH3_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 0bp_to_NM_002470_5end |
EntrezGene: | MYH3 |
HGNC: | 7573 |
UniProt: | P11055 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 4.98e-34 | 9 |
skeletal muscle satellite cell | 3.69e-15 | 3 |
muscle precursor cell | 1.74e-09 | 58 |
myoblast | 1.74e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.74e-09 | 58 |
adipocyte of omentum tissue | 3.76e-07 | 3 |
muscle cell | 5.56e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 8.24e-16 | 64 |
musculature | 8.24e-16 | 64 |
musculature of body | 8.24e-16 | 64 |
skeletal muscle tissue | 2.69e-14 | 62 |
striated muscle tissue | 2.69e-14 | 62 |
myotome | 2.69e-14 | 62 |
somite | 4.55e-12 | 71 |
presomitic mesoderm | 4.55e-12 | 71 |
presumptive segmental plate | 4.55e-12 | 71 |
dermomyotome | 4.55e-12 | 71 |
trunk paraxial mesoderm | 4.55e-12 | 71 |
paraxial mesoderm | 7.42e-12 | 72 |
presumptive paraxial mesoderm | 7.42e-12 | 72 |
dense mesenchyme tissue | 1.20e-11 | 73 |
trunk mesenchyme | 2.89e-11 | 122 |
throat | 7.73e-11 | 2 |
open tracheal system trachea | 9.41e-11 | 2 |
epithelial vesicle | 1.07e-10 | 78 |
trunk | 1.64e-10 | 199 |
multilaminar epithelium | 7.38e-10 | 83 |
omentum | 1.44e-07 | 6 |
peritoneum | 1.44e-07 | 6 |
abdominal cavity | 1.44e-07 | 6 |
visceral peritoneum | 1.44e-07 | 6 |
mesenchyme | 1.46e-07 | 160 |
entire embryonic mesenchyme | 1.46e-07 | 160 |
unilaminar epithelium | 1.73e-07 | 148 |
musculoskeletal system | 6.21e-07 | 167 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.