FFCP PHASE1:Hg19::chr10:121652124..121652136,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000542!8.66e-18!53;CL:0000051!8.66e-18!53;CL:0000037!1.26e-17!172;CL:0000566!1.26e-17!172;CL:0000838!1.94e-17!52;CL:0000988!2.05e-15!182;CL:0002032!3.69e-15!165;CL:0000837!3.69e-15!165;CL:0002087!5.79e-11!119;CL:0000738!1.03e-10!140;CL:0002031!2.78e-10!124;CL:0000791!4.19e-10!18;CL:0000789!4.19e-10!18;CL:0002420!4.19e-10!18;CL:0002419!4.19e-10!18;CL:0000790!4.19e-10!18;CL:0000084!7.35e-10!25;CL:0000827!7.35e-10!25;CL:0000236!1.06e-08!14;CL:0000945!5.05e-08!24;CL:0000826!5.05e-08!24;CL:0000625!7.76e-07!11 | |ontology_enrichment_celltype=CL:0000542!8.66e-18!53;CL:0000051!8.66e-18!53;CL:0000037!1.26e-17!172;CL:0000566!1.26e-17!172;CL:0000838!1.94e-17!52;CL:0000988!2.05e-15!182;CL:0002032!3.69e-15!165;CL:0000837!3.69e-15!165;CL:0002087!5.79e-11!119;CL:0000738!1.03e-10!140;CL:0002031!2.78e-10!124;CL:0000791!4.19e-10!18;CL:0000789!4.19e-10!18;CL:0002420!4.19e-10!18;CL:0002419!4.19e-10!18;CL:0000790!4.19e-10!18;CL:0000084!7.35e-10!25;CL:0000827!7.35e-10!25;CL:0000236!1.06e-08!14;CL:0000945!5.05e-08!24;CL:0000826!5.05e-08!24;CL:0000625!7.76e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.81e-20;18!CL:0000789;3.81e-20;18!CL:0002419;3.81e-20;18!CL:0000084;4.67e-20;25!CL:0000542;1.68e-18;53!CL:0000236;9.67e-18;13!CL:0000625;2.83e-17;11!CL:0000945;2.34e-11;24 | |ontology_enrichment_celltype_v019=CL:0000791;3.81e-20;18!CL:0000789;3.81e-20;18!CL:0002419;3.81e-20;18!CL:0000084;4.67e-20;25!CL:0000542;1.68e-18;53!CL:0000236;9.67e-18;13!CL:0000625;2.83e-17;11!CL:0000945;2.34e-11;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.34e-28,52;CL:0000542,1.44e-27,53;CL:0000051,1.44e-27,53;CL:0000791,2.28e-20,18;CL:0000789,2.28e-20,18;CL:0002420,2.28e-20,18;CL:0002419,2.28e-20,18;CL:0000790,2.28e-20,18;CL:0000084,4.18e-20,25;CL:0000827,4.18e-20,25;CL:0000625,1.79e-17,11;CL:0000236,7.35e-17,14;CL:0000037,5.95e-16,168;CL:0000988,9.30e-15,177;CL:0002032,2.82e-13,161;CL:0000837,2.82e-13,161;CL:0000945,9.19e-12,24;CL:0000826,9.19e-12,24;CL:0000738,1.62e-10,136;CL:0002087,8.41e-10,115;CL:0002031,3.39e-09,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.81e-20;18!CL:0000051;1.68e-18;53 | |ontology_enrichment_development_v019=CL:0000790;3.81e-20;18!CL:0000051;1.68e-18;53 | ||
|ontology_enrichment_disease=DOID:2531!2.96e-12!51;DOID:0060083!2.96e-12!51;DOID:1240!1.18e-11!39;DOID:8692!1.05e-09!31 | |ontology_enrichment_disease=DOID:2531!2.96e-12!51;DOID:0060083!2.96e-12!51;DOID:1240!1.18e-11!39;DOID:8692!1.05e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.21e-08;39!DOID:2531;2.00e-07;51!DOID:0060083;2.00e-07;51 | |ontology_enrichment_disease_v019=DOID:1240;2.21e-08;39!DOID:2531;2.00e-07;51!DOID:0060083;2.00e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,5.27e-10,51;DOID:0060083,5.27e-10,51;DOID:1240,9.98e-10,39;DOID:8692,8.18e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.78e-09;2!UBERON:0005058;1.78e-09;2!UBERON:0009113;1.78e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.78e-09;2!UBERON:0005058;1.78e-09;2!UBERON:0009113;1.78e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.25e-10,4;UBERON:0005058,5.25e-10,4;UBERON:0009113,5.25e-10,4;UBERON:0003295,5.25e-10,4;UBERON:0005562,5.25e-10,4;UBERON:0003351,8.70e-07,6 | |||
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| ||
|short_description=p4@SEC23IP | |short_description=p4@SEC23IP | ||
}} | }} |
Revision as of 01:55, 21 November 2012
Short description: | p4@SEC23IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SEC23IP_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_NM_007190, NR_037771_5end |
EntrezGene: | SEC23IP |
HGNC: | 17018 |
UniProt: | Q9Y6Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.34e-28 | 52 |
lymphocyte | 1.44e-27 | 53 |
common lymphoid progenitor | 1.44e-27 | 53 |
mature alpha-beta T cell | 2.28e-20 | 18 |
alpha-beta T cell | 2.28e-20 | 18 |
immature T cell | 2.28e-20 | 18 |
mature T cell | 2.28e-20 | 18 |
immature alpha-beta T cell | 2.28e-20 | 18 |
T cell | 4.18e-20 | 25 |
pro-T cell | 4.18e-20 | 25 |
CD8-positive, alpha-beta T cell | 1.79e-17 | 11 |
B cell | 7.35e-17 | 14 |
hematopoietic stem cell | 5.95e-16 | 168 |
hematopoietic cell | 9.30e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.82e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.82e-13 | 161 |
lymphocyte of B lineage | 9.19e-12 | 24 |
pro-B cell | 9.19e-12 | 24 |
leukocyte | 1.62e-10 | 136 |
nongranular leukocyte | 8.41e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.39e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.25e-10 | 4 |
hemolymphoid system gland | 5.25e-10 | 4 |
thymic region | 5.25e-10 | 4 |
pharyngeal gland | 5.25e-10 | 4 |
thymus primordium | 5.25e-10 | 4 |
pharyngeal epithelium | 8.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.27e-10 | 51 |
immune system cancer | 5.27e-10 | 51 |
leukemia | 9.98e-10 | 39 |
myeloid leukemia | 8.18e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.