FFCP PHASE1:Hg19::chr11:64107705..64107718,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=283234 | |EntrezGene=283234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26757 | |HGNC=26757 | ||
|TSSclassifier=S | |||
|UniProt=A6NC98 | |UniProt=A6NC98 | ||
|association_with_transcript=10bp_to_ENST00000356786,ENST00000463837,uc001nzy.2,uc009ypo.1_5end | |association_with_transcript=10bp_to_ENST00000356786,ENST00000463837,uc001nzy.2,uc009ypo.1_5end | ||
Revision as of 06:57, 6 July 2013
| Short description: | p2@CCDC88B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_CCDC88B_5end |
| Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
| Association with transcript: | 10bp_to_ENST00000356786, ENST00000463837, uc001nzy.2, uc009ypo.1_5end |
| EntrezGene: | CCDC88B |
| HGNC: | 26757 |
| UniProt: | A6NC98 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CCDC88B |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 2.86e-100 | 168 |
| hematopoietic cell | 9.43e-98 | 177 |
| leukocyte | 6.07e-97 | 136 |
| hematopoietic oligopotent progenitor cell | 8.40e-95 | 161 |
| hematopoietic multipotent progenitor cell | 8.40e-95 | 161 |
| nongranular leukocyte | 9.72e-77 | 115 |
| hematopoietic lineage restricted progenitor cell | 7.49e-75 | 120 |
| myeloid cell | 8.40e-47 | 108 |
| common myeloid progenitor | 8.40e-47 | 108 |
| lymphocyte | 1.47e-43 | 53 |
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 2.52e-48 | 98 |
| blood island | 2.52e-48 | 98 |
| hemolymphoid system | 1.76e-44 | 108 |
| immune system | 1.06e-30 | 93 |
| bone marrow | 2.04e-28 | 76 |
| bone element | 4.66e-25 | 82 |
| connective tissue | 6.72e-23 | 371 |
| skeletal element | 2.61e-21 | 90 |
| skeletal system | 1.59e-17 | 100 |
| blood | 1.88e-16 | 15 |
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 5.01e-11 | 51 |
| immune system cancer | 5.01e-11 | 51 |
| leukemia | 8.86e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
