FFCP PHASE1:Hg19::chr10:101294775..101294781,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:101294775..101294781,+|id=chr10:101294775..101294781,+|ontology_enrichment_celltype=CL:0002057!6.37e-17!42;CL:0000860!3.26e-15!45;CL:0000839!3.00e-11!70;CL:0000557!6.67e-11!71;CL:0002009!1.71e-10!65;CL:0002194!7.62e-10!63;CL:0000576!7.62e-10!63;CL:0000040!7.62e-10!63;CL:0000559!7.62e-10!63;CL:0000003!1.05e-09!722;CL:0000763!1.02e-08!112;CL:0000049!1.02e-08!112;CL:0000012!5.01e-08!682;CL:0002371!7.21e-08!591;CL:0000766!8.40e-08!76;CL:0000548!1.65e-07!679;CL:0000004!1.65e-07!679;CL:0000255!1.65e-07!679;CL:0000144!2.30e-07!625;CL:0002031!3.55e-07!124|ontology_enrichment_celltype_v019=CL:0000860;1.42e-19;33!CL:0002057;1.42e-19;33!CL:0000473;9.50e-19;39!CL:0000234;9.50e-19;39!CL:0000576;4.59e-11;48!CL:0000766;3.73e-07;69|ontology_enrichment_celltype_v019_2=CL:0000473,1.71e-21,48;CL:0000234,1.71e-21,48;CL:0000860,2.40e-19,42;CL:0002057,2.40e-19,42;CL:0002194,8.69e-16,59;CL:0000576,8.69e-16,59;CL:0000040,8.69e-16,59;CL:0000559,8.69e-16,59;CL:0002009,4.67e-15,61;CL:0000839,1.98e-13,66;CL:0000557,3.92e-13,67;CL:0000766,8.80e-12,72;CL:0000763,5.11e-09,108;CL:0000049,5.11e-09,108;CL:0002087,3.45e-07,115|ontology_enrichment_development_v019=CL:0002057;8.55e-14;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.54e-10!80;UBERON:0004765!8.18e-09!101;UBERON:0001434!8.18e-09!101;UBERON:0001474!3.28e-08!86;UBERON:0002204!7.11e-08!167;UBERON:0001737!9.91e-08!9;UBERON:0002405!9.06e-07!115|ontology_enrichment_uberon_v019=UBERON:0001737;1.11e-11;9!UBERON:0001557;1.11e-11;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.89e-12,9;UBERON:0002371,7.80e-11,76;UBERON:0001474,1.36e-09,82;UBERON:0002405,1.61e-09,93;UBERON:0004765,4.45e-09,90;UBERON:0001434,1.46e-07,100;UBERON:0002193,2.57e-07,108;UBERON:0002390,4.49e-07,98;UBERON:0003061,4.49e-07,98|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0.662794751455832,4.70627602516243,3.61616716814386,3.65155045193687,1.46379839637152,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0.726991193897824,1.13362783106643,1.94067248950253,1.62700325833979,2.05583944010913,1.85823822537062,0.575384784644301,1.5369642391746,0.236482229888585,0.344745680736619,3.22742341791913,5.41705946377367,0.564727018627814,1.36453075028923,0.449446968890169,3.06083892370903,0.320929027076094,1.91801137739712,1.31940520074686,1.19678194572979,1.27867425159808,0.870627715885752,0.56738522469114,0.622822248995575,1.50749199154046,1.5644487552606,1.95469960234605,0,1.10483290796269,0.316462387440884,0.422510572623884,0.425208599930087,1.04829322754188,1.12328631146495,1.50176892841506,0.48217676009124,0.570025487482497,1.39241674039363,0.365328307529268,0,0,0.889509253863555,0.426730222566507,0,1.14950487990897,0,0,0,0.587237189370939,0,0,1.12101712596307,1.58030450865046,0.196709770113833,0,0,0.83593247695339,1.30368906653436,0.946895611469467,1.94826728407911,1.6711568532776,3.53527088969805,1.32920336750173,0.812411591295047,0.128091319725675,0.260118695119756,0.493313713811028,0,1.44901542867526,1.03800594213442,1.33770414044857,0,1.35971211237079,0.766440987203842,0.68725489096526,1.26509846009751,0,0,0.950452044448374,0.451725357233318,0.639933055772092,0,0,0,0.201606743224732,0.267440195783507,0,0,0,1.40648818027883,0,0,0,0,0,0,0,0,0,0.728590576585084,1.11235332835329,0,0,0,0,0.571994910780128,1.11437250398869,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0.805658634218294,2.28081631715554,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0.605429710579726,1.15235184896,0.234321431833797,0.936480230490962,0,0.298897361103602,0.23486899728753,0.323745888736263,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,1.43723628363248,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0.309157587715317,0,0.18611685633159,0.506328996723799,0.0974370051611986,0.252433774244115,0,1.45481451136931,0,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,1.00928340350251,1.09493207722749,0,0,0,0,0,2.12952240071719,1.85443159085912,0.964044119533928,2.31617342738027,1.96091499683166,1.66089433377768,0.943819157121151,2.5508790466295,2.69323009862473,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,1.02940686179115,0.219500570817251,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,2.88662684050547,1.27523445472584,0.3522260827074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ption=p@chr10:101294775..101294781,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:101294775..101294781,+ | |||
|id=chr10:101294775..101294781,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.37e-17!42;CL:0000860!3.26e-15!45;CL:0000839!3.00e-11!70;CL:0000557!6.67e-11!71;CL:0002009!1.71e-10!65;CL:0002194!7.62e-10!63;CL:0000576!7.62e-10!63;CL:0000040!7.62e-10!63;CL:0000559!7.62e-10!63;CL:0000003!1.05e-09!722;CL:0000763!1.02e-08!112;CL:0000049!1.02e-08!112;CL:0000012!5.01e-08!682;CL:0002371!7.21e-08!591;CL:0000766!8.40e-08!76;CL:0000548!1.65e-07!679;CL:0000004!1.65e-07!679;CL:0000255!1.65e-07!679;CL:0000144!2.30e-07!625;CL:0002031!3.55e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.42e-19;33!CL:0002057;1.42e-19;33!CL:0000473;9.50e-19;39!CL:0000234;9.50e-19;39!CL:0000576;4.59e-11;48!CL:0000766;3.73e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.71e-21,48;CL:0000234,1.71e-21,48;CL:0000860,2.40e-19,42;CL:0002057,2.40e-19,42;CL:0002194,8.69e-16,59;CL:0000576,8.69e-16,59;CL:0000040,8.69e-16,59;CL:0000559,8.69e-16,59;CL:0002009,4.67e-15,61;CL:0000839,1.98e-13,66;CL:0000557,3.92e-13,67;CL:0000766,8.80e-12,72;CL:0000763,5.11e-09,108;CL:0000049,5.11e-09,108;CL:0002087,3.45e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;8.55e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.54e-10!80;UBERON:0004765!8.18e-09!101;UBERON:0001434!8.18e-09!101;UBERON:0001474!3.28e-08!86;UBERON:0002204!7.11e-08!167;UBERON:0001737!9.91e-08!9;UBERON:0002405!9.06e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.11e-11;9!UBERON:0001557;1.11e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.89e-12,9;UBERON:0002371,7.80e-11,76;UBERON:0001474,1.36e-09,82;UBERON:0002405,1.61e-09,93;UBERON:0004765,4.45e-09,90;UBERON:0001434,1.46e-07,100;UBERON:0002193,2.57e-07,108;UBERON:0002390,4.49e-07,98;UBERON:0003061,4.49e-07,98 | |||
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| |||
|short_description=p@chr10:101294775..101294781,+ | |||
}} |
Revision as of 11:15, 10 September 2013
Short description: | p@chr10:101294775..101294781, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:101294775..101294781, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.71e-21 | 48 |
phagocyte | 1.71e-21 | 48 |
classical monocyte | 2.40e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.40e-19 | 42 |
monopoietic cell | 8.69e-16 | 59 |
monocyte | 8.69e-16 | 59 |
monoblast | 8.69e-16 | 59 |
promonocyte | 8.69e-16 | 59 |
macrophage dendritic cell progenitor | 4.67e-15 | 61 |
myeloid lineage restricted progenitor cell | 1.98e-13 | 66 |
granulocyte monocyte progenitor cell | 3.92e-13 | 67 |
myeloid leukocyte | 8.80e-12 | 72 |
myeloid cell | 5.11e-09 | 108 |
common myeloid progenitor | 5.11e-09 | 108 |
nongranular leukocyte | 3.45e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.89e-12 | 9 |
bone marrow | 7.80e-11 | 76 |
bone element | 1.36e-09 | 82 |
immune system | 1.61e-09 | 93 |
skeletal element | 4.45e-09 | 90 |
skeletal system | 1.46e-07 | 100 |
hemolymphoid system | 2.57e-07 | 108 |
hematopoietic system | 4.49e-07 | 98 |
blood island | 4.49e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.