FFCP PHASE1:Hg19::chr10:101691199..101691208,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23268|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30373|TSSclassifier=N|UniProt=|association_with_transcript=-446bp_to_ENST00000543621,uc001kqh.2_5end|coexpression_cluster_id=C221|description=CAGE_peak_11_at_DNMBP_5end|id=chr10:101691199..101691208,-|ontology_enrichment_celltype=CL:0000066!2.00e-09!254|ontology_enrichment_celltype_v019=CL:0000322;4.27e-34;3!CL:0002202;2.19e-12;9!CL:0002632;2.19e-12;9!CL:0002368;5.28e-09;13|ontology_enrichment_celltype_v019_2=CL:0000322,4.27e-34,3;CL:0002202,2.19e-12,9;CL:0002632,2.19e-12,9;CL:0002368,5.28e-09,13|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:4929!5.20e-10!2;DOID:305!1.24e-07!106;DOID:0050687!4.37e-07!143;DOID:1324!7.97e-07!15|ontology_enrichment_disease_v019=DOID:3910;2.74e-50;2!DOID:3908;4.21e-21;5!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16|ontology_enrichment_disease_v019_2=DOID:3910,2.74e-50,2;DOID:3908,4.21e-21,5;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16|ontology_enrichment_uberon=UBERON:0004119!1.81e-08!169;UBERON:0000925!1.81e-08!169;UBERON:0006595!1.81e-08!169;UBERON:0005911!5.10e-08!82;UBERON:0001007!8.05e-08!155;UBERON:0001555!8.05e-08!155;UBERON:0007026!8.05e-08!155;UBERON:0000058!3.96e-07!26;UBERON:0002108!4.17e-07!14;UBERON:0000160!8.19e-07!27|ontology_enrichment_uberon_v019=UBERON:0004903;2.74e-50;2!UBERON:0002173;2.74e-50;2!UBERON:0002186;2.74e-50;2!UBERON:0004821;4.27e-34;3!UBERON:0007499;4.27e-34;3!UBERON:0003215;4.27e-34;3!UBERON:0010368;4.27e-34;3!UBERON:0009911;4.27e-34;3!UBERON:0002299;4.27e-34;3!UBERON:0006524;4.27e-34;3!UBERON:0008874;4.27e-34;3!UBERON:0002169;4.27e-34;3!UBERON:0004894;4.27e-34;3!UBERON:0009856;5.56e-26;4!UBERON:0000058;2.73e-11;10!UBERON:0007196;5.55e-08;15!UBERON:0001558;5.55e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.74e-50,2;UBERON:0002173,2.74e-50,2;UBERON:0002186,2.74e-50,2;UBERON:0004821,4.27e-34,3;UBERON:0003215,4.27e-34,3;UBERON:0010368,4.27e-34,3;UBERON:0009911,4.27e-34,3;UBERON:0002299,4.27e-34,3;UBERON:0006524,4.27e-34,3;UBERON:0008874,4.27e-34,3;UBERON:0002169,4.27e-34,3;UBERON:0004894,4.27e-34,3;UBERON:0007196,5.55e-08,15;UBERON:0001558,5.55e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5351313765475,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0.432164393964449,3.72757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0.118193840883968,0,0,0.157115589916002,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.617393264863557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0.718601616852695,0,0,0,0,0,0|short_description=p11@DNMBP}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23268 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30373 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-446bp_to_ENST00000543621,uc001kqh.2_5end | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_11_at_DNMBP_5end | |||
|id=chr10:101691199..101691208,- | |||
|ontology_enrichment_celltype=CL:0000066!2.00e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0000322;4.27e-34;3!CL:0002202;2.19e-12;9!CL:0002632;2.19e-12;9!CL:0002368;5.28e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,4.27e-34,3;CL:0002202,2.19e-12,9;CL:0002632,2.19e-12,9;CL:0002368,5.28e-09,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!5.20e-10!2;DOID:305!1.24e-07!106;DOID:0050687!4.37e-07!143;DOID:1324!7.97e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.74e-50;2!DOID:3908;4.21e-21;5!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.74e-50,2;DOID:3908,4.21e-21,5;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.81e-08!169;UBERON:0000925!1.81e-08!169;UBERON:0006595!1.81e-08!169;UBERON:0005911!5.10e-08!82;UBERON:0001007!8.05e-08!155;UBERON:0001555!8.05e-08!155;UBERON:0007026!8.05e-08!155;UBERON:0000058!3.96e-07!26;UBERON:0002108!4.17e-07!14;UBERON:0000160!8.19e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.74e-50;2!UBERON:0002173;2.74e-50;2!UBERON:0002186;2.74e-50;2!UBERON:0004821;4.27e-34;3!UBERON:0007499;4.27e-34;3!UBERON:0003215;4.27e-34;3!UBERON:0010368;4.27e-34;3!UBERON:0009911;4.27e-34;3!UBERON:0002299;4.27e-34;3!UBERON:0006524;4.27e-34;3!UBERON:0008874;4.27e-34;3!UBERON:0002169;4.27e-34;3!UBERON:0004894;4.27e-34;3!UBERON:0009856;5.56e-26;4!UBERON:0000058;2.73e-11;10!UBERON:0007196;5.55e-08;15!UBERON:0001558;5.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.74e-50,2;UBERON:0002173,2.74e-50,2;UBERON:0002186,2.74e-50,2;UBERON:0004821,4.27e-34,3;UBERON:0003215,4.27e-34,3;UBERON:0010368,4.27e-34,3;UBERON:0009911,4.27e-34,3;UBERON:0002299,4.27e-34,3;UBERON:0006524,4.27e-34,3;UBERON:0008874,4.27e-34,3;UBERON:0002169,4.27e-34,3;UBERON:0004894,4.27e-34,3;UBERON:0007196,5.55e-08,15;UBERON:0001558,5.55e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5351313765475,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0.432164393964449,3.72757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0.118193840883968,0,0,0.157115589916002,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.617393264863557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0.718601616852695,0,0,0,0,0,0 | |||
|short_description=p11@DNMBP | |||
}} |
Revision as of 11:16, 10 September 2013
Short description: | p11@DNMBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_DNMBP_5end |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | -446bp_to_ENST00000543621, uc001kqh.2_5end |
EntrezGene: | DNMBP |
HGNC: | 30373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 4.27e-34 | 3 |
epithelial cell of tracheobronchial tree | 2.19e-12 | 9 |
epithelial cell of lower respiratory tract | 2.19e-12 | 9 |
respiratory epithelial cell | 5.28e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.74e-50 | 2 |
alveolar duct | 2.74e-50 | 2 |
bronchiole | 2.74e-50 | 2 |
pulmonary alveolus epithelium | 4.27e-34 | 3 |
alveolus | 4.27e-34 | 3 |
pulmonary lobule | 4.27e-34 | 3 |
lobule | 4.27e-34 | 3 |
alveolus of lung | 4.27e-34 | 3 |
alveolar system | 4.27e-34 | 3 |
pulmonary acinus | 4.27e-34 | 3 |
alveolar sac | 4.27e-34 | 3 |
alveolar wall | 4.27e-34 | 3 |
tracheobronchial tree | 5.55e-08 | 15 |
lower respiratory tract | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.74e-50 | 2 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.