FFCP PHASE1:Hg19::chr10:105428550..105428555,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9644|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=23664|TSSclassifier=S|UniProt=|association_with_transcript=-118bp_to_uc010qqs.1_5end|coexpression_cluster_id=C2033|description=CAGE_peak_25_at_SH3PXD2A_5end|id=chr10:105428550..105428555,-|ontology_enrichment_celltype=CL:0000136!1.17e-17!15;CL:0002334!1.76e-12!12;CL:0000048!2.11e-09!430;CL:0000723!4.86e-09!436;CL:0000034!1.42e-08!444;CL:0002579!1.49e-08!3;CL:0000134!1.78e-08!358;CL:0002580!1.80e-08!3;CL:0002615!2.08e-08!3;CL:0000057!3.94e-08!75;CL:0002320!4.88e-08!365;CL:0002620!8.42e-08!23;CL:0002541!2.89e-07!3;CL:0000219!5.13e-07!390|ontology_enrichment_celltype_v019=CL:0002579;4.52e-36;3!CL:0002334;2.72e-35;12!CL:0002615;3.19e-35;3!CL:0000136;7.02e-32;13!CL:0002580;5.51e-17;3!CL:0002616;1.61e-13;1!CL:0002581;2.62e-13;1!CL:0002617;4.17e-07;2|ontology_enrichment_celltype_v019_2=CL:0002579,5.42e-36,3;CL:0002334,2.73e-35,12;CL:0002615,2.85e-35,3;CL:0000136,1.39e-27,15;CL:0002580,5.30e-17,3;CL:0002616,1.61e-13,1;CL:0002581,2.32e-13,1;CL:0002617,3.93e-07,2;CL:0000057,4.86e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3369;6.05e-13;1!DOID:3571;6.05e-13;1!DOID:3350;4.17e-07;2|ontology_enrichment_disease_v019_2=DOID:3369,3.33e-13,1;DOID:3571,4.23e-13,1;DOID:3350,3.48e-07,2|ontology_enrichment_uberon=UBERON:0003688!2.82e-15!6;UBERON:0002358!2.82e-15!6;UBERON:0003684!2.82e-15!6;UBERON:0001178!2.82e-15!6;UBERON:0002384!1.65e-08!375;UBERON:0000476!2.89e-07!3;UBERON:0000920!2.89e-07!3;UBERON:0004457!3.82e-07!12;UBERON:0000042!3.82e-07!12|ontology_enrichment_uberon_v019=UBERON:0003688;1.80e-69;6!UBERON:0002358;1.80e-69;6!UBERON:0003684;1.80e-69;6!UBERON:0001178;1.80e-69;6!UBERON:0004457;2.70e-46;9!UBERON:0000042;2.70e-46;9!UBERON:0005406;4.94e-25;2!UBERON:0000310;2.79e-11;10!UBERON:0001443;2.63e-10;11!UBERON:0004458;1.37e-08;48!UBERON:0002323;5.40e-08;45!UBERON:0002553;7.23e-07;52!UBERON:0004923;9.22e-07;55|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.92e-69,6;UBERON:0002358,1.92e-69,6;UBERON:0003684,1.92e-69,6;UBERON:0001178,1.92e-69,6;UBERON:0004457,1.12e-34,12;UBERON:0000042,1.12e-34,12;UBERON:0005406,4.38e-25,2;UBERON:0002323,7.60e-12,46;UBERON:0000310,2.65e-11,10;UBERON:0004458,4.40e-11,49;UBERON:0001443,2.51e-10,11;UBERON:0003886,5.33e-10,54;UBERON:0009569,3.19e-09,112;UBERON:0002417,5.85e-09,60;UBERON:0000916,5.85e-09,60;UBERON:0002553,8.84e-09,61;UBERON:0004923,4.74e-08,66|phase1_expression=0.54503513781167,1.2846031433459,1.9733616573436,1.0007329835313,1.34088328328186,4.36169262050184,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0,0,0.900273288253207,0.103052529238439,0,0,0.675105328965065,0.876933046450788,0.504867548488229,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,3.47350930946288,2.455391572609,0.841980283299221,1.28139149255701,3.07024349440022,2.0911009748669,2.96836132889982,0,0.355123450626254,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.275673144969061,0,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0.23056390438806,0,0.108647371922008,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0.166211681900156,0.451191321234361,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,1.08803560673895,0,0.30634557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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9644 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23664 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-118bp_to_uc010qqs.1_5end | |||
|coexpression_cluster_id=C2033 | |||
|description=CAGE_peak_25_at_SH3PXD2A_5end | |||
|id=chr10:105428550..105428555,- | |||
|ontology_enrichment_celltype=CL:0000136!1.17e-17!15;CL:0002334!1.76e-12!12;CL:0000048!2.11e-09!430;CL:0000723!4.86e-09!436;CL:0000034!1.42e-08!444;CL:0002579!1.49e-08!3;CL:0000134!1.78e-08!358;CL:0002580!1.80e-08!3;CL:0002615!2.08e-08!3;CL:0000057!3.94e-08!75;CL:0002320!4.88e-08!365;CL:0002620!8.42e-08!23;CL:0002541!2.89e-07!3;CL:0000219!5.13e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002579;4.52e-36;3!CL:0002334;2.72e-35;12!CL:0002615;3.19e-35;3!CL:0000136;7.02e-32;13!CL:0002580;5.51e-17;3!CL:0002616;1.61e-13;1!CL:0002581;2.62e-13;1!CL:0002617;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,5.42e-36,3;CL:0002334,2.73e-35,12;CL:0002615,2.85e-35,3;CL:0000136,1.39e-27,15;CL:0002580,5.30e-17,3;CL:0002616,1.61e-13,1;CL:0002581,2.32e-13,1;CL:0002617,3.93e-07,2;CL:0000057,4.86e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;6.05e-13;1!DOID:3571;6.05e-13;1!DOID:3350;4.17e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.33e-13,1;DOID:3571,4.23e-13,1;DOID:3350,3.48e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.82e-15!6;UBERON:0002358!2.82e-15!6;UBERON:0003684!2.82e-15!6;UBERON:0001178!2.82e-15!6;UBERON:0002384!1.65e-08!375;UBERON:0000476!2.89e-07!3;UBERON:0000920!2.89e-07!3;UBERON:0004457!3.82e-07!12;UBERON:0000042!3.82e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.80e-69;6!UBERON:0002358;1.80e-69;6!UBERON:0003684;1.80e-69;6!UBERON:0001178;1.80e-69;6!UBERON:0004457;2.70e-46;9!UBERON:0000042;2.70e-46;9!UBERON:0005406;4.94e-25;2!UBERON:0000310;2.79e-11;10!UBERON:0001443;2.63e-10;11!UBERON:0004458;1.37e-08;48!UBERON:0002323;5.40e-08;45!UBERON:0002553;7.23e-07;52!UBERON:0004923;9.22e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.92e-69,6;UBERON:0002358,1.92e-69,6;UBERON:0003684,1.92e-69,6;UBERON:0001178,1.92e-69,6;UBERON:0004457,1.12e-34,12;UBERON:0000042,1.12e-34,12;UBERON:0005406,4.38e-25,2;UBERON:0002323,7.60e-12,46;UBERON:0000310,2.65e-11,10;UBERON:0004458,4.40e-11,49;UBERON:0001443,2.51e-10,11;UBERON:0003886,5.33e-10,54;UBERON:0009569,3.19e-09,112;UBERON:0002417,5.85e-09,60;UBERON:0000916,5.85e-09,60;UBERON:0002553,8.84e-09,61;UBERON:0004923,4.74e-08,66 | |||
|phase1_expression=0.54503513781167,1.2846031433459,1.9733616573436,1.0007329835313,1.34088328328186,4.36169262050184,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0,0,0.900273288253207,0.103052529238439,0,0,0.675105328965065,0.876933046450788,0.504867548488229,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,3.47350930946288,2.455391572609,0.841980283299221,1.28139149255701,3.07024349440022,2.0911009748669,2.96836132889982,0,0.355123450626254,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.275673144969061,0,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0.23056390438806,0,0.108647371922008,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0.166211681900156,0.451191321234361,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,1.08803560673895,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.466311601748341,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0,0.107410557042488,0,1.19428766609585,0,0,0.336749488765919,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p25@SH3PXD2A | |||
}} |
Revision as of 11:32, 10 September 2013
Short description: | p25@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_SH3PXD2A_5end |
Coexpression cluster: | C2033_Preadipocyte_Adipocyte_hepatic_Mesenchymal_Ewing_skeletal_Fibroblast |
Association with transcript: | -118bp_to_uc010qqs.1_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 5.42e-36 | 3 |
preadipocyte | 2.73e-35 | 12 |
adipocyte of omentum tissue | 2.85e-35 | 3 |
fat cell | 1.39e-27 | 15 |
preadipocyte of the breast | 5.30e-17 | 3 |
perirenal adipocyte cell | 1.61e-13 | 1 |
perirenal preadipocyte | 2.32e-13 | 1 |
adipocyte of breast | 3.93e-07 | 2 |
fibroblast | 4.86e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.92e-69 | 6 |
peritoneum | 1.92e-69 | 6 |
abdominal cavity | 1.92e-69 | 6 |
visceral peritoneum | 1.92e-69 | 6 |
cavity lining | 1.12e-34 | 12 |
serous membrane | 1.12e-34 | 12 |
perirenal fat | 4.38e-25 | 2 |
body cavity | 7.60e-12 | 46 |
breast | 2.65e-11 | 10 |
body cavity or lining | 4.40e-11 | 49 |
chest | 2.51e-10 | 11 |
body cavity precursor | 5.33e-10 | 54 |
subdivision of trunk | 3.19e-09 | 112 |
abdominal segment of trunk | 5.85e-09 | 60 |
abdomen | 5.85e-09 | 60 |
anatomical cavity | 8.84e-09 | 61 |
organ component layer | 4.74e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.33e-13 | 1 |
liver cancer | 4.23e-13 | 1 |
mesenchymal cell neoplasm | 3.48e-07 | 2 |
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