FFCP PHASE1:Hg19::chr10:114144143..114144177,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C6|description=CAGE_peak_at_chr10:114144143..114144177,+|id=chr10:114144143..114144177,+|ontology_enrichment_celltype=CL:0002057!1.06e-68!42;CL:0000860!9.03e-64!45;CL:0000766!2.16e-45!76;CL:0002194!2.80e-43!63;CL:0000576!2.80e-43!63;CL:0000040!2.80e-43!63;CL:0000559!2.80e-43!63;CL:0002009!8.29e-42!65;CL:0000839!1.71e-38!70;CL:0000557!6.95e-38!71;CL:0000763!1.74e-31!112;CL:0000049!1.74e-31!112;CL:0000738!2.55e-30!140;CL:0002087!4.39e-29!119;CL:0000037!2.43e-25!172;CL:0000566!2.43e-25!172;CL:0000988!1.32e-23!182;CL:0002031!1.99e-23!124;CL:0002032!6.06e-23!165;CL:0000837!6.06e-23!165;CL:0000767!4.95e-17!3;CL:0002393!7.60e-15!9;CL:0002397!7.60e-15!9;CL:0000134!7.78e-09!358;CL:0002320!1.53e-08!365;CL:0000842!8.00e-08!3;CL:0000219!1.68e-07!390;CL:0000034!2.92e-07!444;CL:0000048!6.07e-07!430;CL:0000723!9.35e-07!436|ontology_enrichment_celltype_v019=CL:0000860;3.80e-35;33!CL:0002057;3.80e-35;33!CL:0000767;3.60e-33;3!CL:0000473;2.16e-26;39!CL:0000234;2.16e-26;39!CL:0000576;2.16e-23;48!CL:0000766;1.32e-22;69!CL:0002393;1.90e-17;6!CL:0002397;1.90e-17;6!CL:0000094;7.31e-13;8!CL:0000763;1.32e-11;100!CL:0002087;2.70e-10;104!CL:0000081;1.65e-09;11|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-49,42;CL:0002057,1.21e-49,42;CL:0000473,3.20e-43,48;CL:0000234,3.20e-43,48;CL:0000766,1.74e-41,72;CL:0002194,3.17e-34,59;CL:0000576,3.17e-34,59;CL:0000040,3.17e-34,59;CL:0000559,3.17e-34,59;CL:0000767,4.03e-33,3;CL:0002009,4.60e-33,61;CL:0000839,1.84e-30,66;CL:0000557,5.49e-30,67;CL:0000763,4.02e-27,108;CL:0000049,4.02e-27,108;CL:0000738,3.76e-21,136;CL:0002032,1.48e-17,161;CL:0000837,1.48e-17,161;CL:0002087,8.47e-17,115;CL:0000037,9.72e-17,168;CL:0002031,5.04e-16,120;CL:0000988,8.81e-16,177;CL:0000094,7.61e-13,8;CL:0002393,8.77e-12,9;CL:0002397,8.77e-12,9;CL:0000081,1.70e-09,11;CL:0000134,9.68e-07,354|ontology_enrichment_development_v019=CL:0002057;8.61e-34;42!CL:0000049;3.95e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.35e-33!80;UBERON:0001474!1.93e-30!86;UBERON:0002390!1.13e-29!102;UBERON:0003061!1.13e-29!102;UBERON:0002193!1.50e-26!112;UBERON:0004765!3.46e-25!101;UBERON:0001434!3.46e-25!101;UBERON:0002405!1.65e-21!115;UBERON:0002204!1.45e-14!167;UBERON:0003081!1.98e-13!216;UBERON:0002384!3.87e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.87e-26,76;UBERON:0001474,3.10e-24,82;UBERON:0004765,6.12e-22,90;UBERON:0002405,3.53e-21,93;UBERON:0002390,5.16e-20,98;UBERON:0003061,5.16e-20,98;UBERON:0001434,1.40e-19,100;UBERON:0002193,5.30e-18,108;UBERON:0002204,5.54e-11,167;UBERON:0003081,1.11e-08,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,3.83829398097213,1.70297735647684,0,0,0,0,0,0,1.10799081706375,5.21415563422368,13.6716848550987,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0,0,0.709446689665756,4.48169384957604,3.87290810150296,4.06279459783025,0,0,0.224723484445085,3.06083892370903,0.962787081228281,1.91801137739712,0,0,0.426224750532694,3.48251086354301,4.53908179752912,3.73693349397345,0,0,0,1.81619850790011,1.84138817993782,11.7091083353127,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:114144143..114144177,+ | |||
|id=chr10:114144143..114144177,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-68!42;CL:0000860!9.03e-64!45;CL:0000766!2.16e-45!76;CL:0002194!2.80e-43!63;CL:0000576!2.80e-43!63;CL:0000040!2.80e-43!63;CL:0000559!2.80e-43!63;CL:0002009!8.29e-42!65;CL:0000839!1.71e-38!70;CL:0000557!6.95e-38!71;CL:0000763!1.74e-31!112;CL:0000049!1.74e-31!112;CL:0000738!2.55e-30!140;CL:0002087!4.39e-29!119;CL:0000037!2.43e-25!172;CL:0000566!2.43e-25!172;CL:0000988!1.32e-23!182;CL:0002031!1.99e-23!124;CL:0002032!6.06e-23!165;CL:0000837!6.06e-23!165;CL:0000767!4.95e-17!3;CL:0002393!7.60e-15!9;CL:0002397!7.60e-15!9;CL:0000134!7.78e-09!358;CL:0002320!1.53e-08!365;CL:0000842!8.00e-08!3;CL:0000219!1.68e-07!390;CL:0000034!2.92e-07!444;CL:0000048!6.07e-07!430;CL:0000723!9.35e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.80e-35;33!CL:0002057;3.80e-35;33!CL:0000767;3.60e-33;3!CL:0000473;2.16e-26;39!CL:0000234;2.16e-26;39!CL:0000576;2.16e-23;48!CL:0000766;1.32e-22;69!CL:0002393;1.90e-17;6!CL:0002397;1.90e-17;6!CL:0000094;7.31e-13;8!CL:0000763;1.32e-11;100!CL:0002087;2.70e-10;104!CL:0000081;1.65e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-49,42;CL:0002057,1.21e-49,42;CL:0000473,3.20e-43,48;CL:0000234,3.20e-43,48;CL:0000766,1.74e-41,72;CL:0002194,3.17e-34,59;CL:0000576,3.17e-34,59;CL:0000040,3.17e-34,59;CL:0000559,3.17e-34,59;CL:0000767,4.03e-33,3;CL:0002009,4.60e-33,61;CL:0000839,1.84e-30,66;CL:0000557,5.49e-30,67;CL:0000763,4.02e-27,108;CL:0000049,4.02e-27,108;CL:0000738,3.76e-21,136;CL:0002032,1.48e-17,161;CL:0000837,1.48e-17,161;CL:0002087,8.47e-17,115;CL:0000037,9.72e-17,168;CL:0002031,5.04e-16,120;CL:0000988,8.81e-16,177;CL:0000094,7.61e-13,8;CL:0002393,8.77e-12,9;CL:0002397,8.77e-12,9;CL:0000081,1.70e-09,11;CL:0000134,9.68e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;8.61e-34;42!CL:0000049;3.95e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.35e-33!80;UBERON:0001474!1.93e-30!86;UBERON:0002390!1.13e-29!102;UBERON:0003061!1.13e-29!102;UBERON:0002193!1.50e-26!112;UBERON:0004765!3.46e-25!101;UBERON:0001434!3.46e-25!101;UBERON:0002405!1.65e-21!115;UBERON:0002204!1.45e-14!167;UBERON:0003081!1.98e-13!216;UBERON:0002384!3.87e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.87e-26,76;UBERON:0001474,3.10e-24,82;UBERON:0004765,6.12e-22,90;UBERON:0002405,3.53e-21,93;UBERON:0002390,5.16e-20,98;UBERON:0003061,5.16e-20,98;UBERON:0001434,1.40e-19,100;UBERON:0002193,5.30e-18,108;UBERON:0002204,5.54e-11,167;UBERON:0003081,1.11e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,3.83829398097213,1.70297735647684,0,0,0,0,0,0,1.10799081706375,5.21415563422368,13.6716848550987,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0,0,0.709446689665756,4.48169384957604,3.87290810150296,4.06279459783025,0,0,0.224723484445085,3.06083892370903,0.962787081228281,1.91801137739712,0,0,0.426224750532694,3.48251086354301,4.53908179752912,3.73693349397345,0,0,0,1.81619850790011,1.84138817993782,11.7091083353127,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:114144143..114144177,+ | |||
}} |
Revision as of 11:47, 10 September 2013
Short description: | p@chr10:114144143..114144177, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:114144143..114144177, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.21e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-49 | 42 |
defensive cell | 3.20e-43 | 48 |
phagocyte | 3.20e-43 | 48 |
myeloid leukocyte | 1.74e-41 | 72 |
monopoietic cell | 3.17e-34 | 59 |
monocyte | 3.17e-34 | 59 |
monoblast | 3.17e-34 | 59 |
promonocyte | 3.17e-34 | 59 |
basophil | 4.03e-33 | 3 |
macrophage dendritic cell progenitor | 4.60e-33 | 61 |
myeloid lineage restricted progenitor cell | 1.84e-30 | 66 |
granulocyte monocyte progenitor cell | 5.49e-30 | 67 |
myeloid cell | 4.02e-27 | 108 |
common myeloid progenitor | 4.02e-27 | 108 |
leukocyte | 3.76e-21 | 136 |
hematopoietic oligopotent progenitor cell | 1.48e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.48e-17 | 161 |
nongranular leukocyte | 8.47e-17 | 115 |
hematopoietic stem cell | 9.72e-17 | 168 |
hematopoietic lineage restricted progenitor cell | 5.04e-16 | 120 |
hematopoietic cell | 8.81e-16 | 177 |
granulocyte | 7.61e-13 | 8 |
intermediate monocyte | 8.77e-12 | 9 |
CD14-positive, CD16-positive monocyte | 8.77e-12 | 9 |
blood cell | 1.70e-09 | 11 |
mesenchymal cell | 9.68e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.87e-26 | 76 |
bone element | 3.10e-24 | 82 |
skeletal element | 6.12e-22 | 90 |
immune system | 3.53e-21 | 93 |
hematopoietic system | 5.16e-20 | 98 |
blood island | 5.16e-20 | 98 |
skeletal system | 1.40e-19 | 100 |
hemolymphoid system | 5.30e-18 | 108 |
musculoskeletal system | 5.54e-11 | 167 |
lateral plate mesoderm | 1.11e-08 | 203 |
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