FFCP PHASE1:Hg19::chr10:126684635..126684641,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:126684635..126684641,+|id=chr10:126684635..126684641,+|ontology_enrichment_celltype=CL:0000037!1.51e-08!172;CL:0000566!1.51e-08!172;CL:0002087!4.66e-08!119;CL:0002032!8.07e-08!165;CL:0000837!8.07e-08!165;CL:0000988!1.06e-07!182;CL:0000738!1.96e-07!140;CL:0002031!3.03e-07!124|ontology_enrichment_celltype_v019=CL:0000511;5.74e-09;1!CL:0002625;5.74e-09;1!CL:0000216;5.74e-09;1!CL:0000625;8.99e-07;11|ontology_enrichment_celltype_v019_2=CL:0000511,3.31e-09,1;CL:0002625,3.31e-09,1;CL:0000216,3.31e-09,1|ontology_enrichment_development_v019=UBERON:0005425;2.21e-09;1|ontology_enrichment_disease=DOID:162!2.24e-19!235;DOID:14566!1.51e-18!239;DOID:0050687!1.82e-12!143;DOID:0050686!5.82e-10!137;DOID:305!5.07e-08!106|ontology_enrichment_disease_v019=DOID:3307;3.56e-17;2|ontology_enrichment_disease_v019_2=DOID:3307,3.57e-17,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000941;2.21e-09;1!UBERON:0001389;2.21e-09;1!UBERON:0000026;2.21e-09;1!UBERON:0008784;2.21e-09;1!UBERON:0001785;2.21e-09;1!UBERON:0002464;2.21e-09;1!UBERON:0004904;2.21e-09;1!UBERON:0006058;2.21e-09;1!UBERON:0003663;2.21e-09;1!UBERON:0004256;2.21e-09;1!UBERON:0001021;2.21e-09;1!UBERON:0004708;2.21e-09;1!UBERON:0002101;2.21e-09;1!UBERON:0004709;2.21e-09;1!UBERON:0002529;2.21e-09;1!UBERON:0010538;2.21e-09;1!UBERON:0003661;2.21e-09;1!UBERON:0010890;2.21e-09;1!UBERON:0002471;2.21e-09;1!UBERON:0001383;2.21e-09;1!UBERON:0010758;2.21e-09;1!UBERON:0010707;2.21e-09;1!UBERON:0000978;2.21e-09;1!UBERON:0002103;2.21e-09;1!UBERON:0001665;2.21e-09;1!UBERON:0003823;2.21e-09;1!UBERON:0000154;2.21e-09;1!UBERON:0010709;2.21e-09;1!UBERON:0001136;5.74e-09;1!UBERON:0001343;5.74e-09;1!UBERON:0004910;5.74e-09;1!UBERON:0004813;5.74e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.89e-09,1;UBERON:0001785,1.89e-09,1;UBERON:0002464,1.89e-09,1;UBERON:0004904,1.89e-09,1;UBERON:0001021,1.89e-09,1;UBERON:0003902,1.89e-09,1;UBERON:0005425,1.89e-09,1;UBERON:0005418,2.04e-09,1;UBERON:0001389,2.04e-09,1;UBERON:0000026,2.04e-09,1;UBERON:0008784,2.04e-09,1;UBERON:0006058,2.04e-09,1;UBERON:0003663,2.04e-09,1;UBERON:0004256,2.04e-09,1;UBERON:0004708,2.04e-09,1;UBERON:0002101,2.04e-09,1;UBERON:0004709,2.04e-09,1;UBERON:0002529,2.04e-09,1;UBERON:0010538,2.04e-09,1;UBERON:0003661,2.04e-09,1;UBERON:0010890,2.04e-09,1;UBERON:0002471,2.04e-09,1;UBERON:0001383,2.04e-09,1;UBERON:0004357,2.04e-09,1;UBERON:0004347,2.04e-09,1;UBERON:0005420,2.04e-09,1;UBERON:0005732,2.04e-09,1;UBERON:0010758,2.04e-09,1;UBERON:0010707,2.04e-09,1;UBERON:0000978,2.04e-09,1;UBERON:0002103,2.04e-09,1;UBERON:0001665,2.04e-09,1;UBERON:0003823,2.04e-09,1;UBERON:0000154,2.04e-09,1;UBERON:0010709,2.04e-09,1;UBERON:0005733,2.04e-09,1;UBERON:0005730,2.04e-09,1;UBERON:0001136,3.31e-09,1;UBERON:0001343,3.31e-09,1;UBERON:0004910,3.31e-09,1;UBERON:0005154,3.31e-09,1;UBERON:0005295,3.31e-09,1;UBERON:0004813,3.31e-09,1;UBERON:0005297,3.31e-09,1;UBERON:0005294,3.31e-09,1;UBERON:0010141,3.31e-09,1;UBERON:0005891,3.31e-09,1|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0.309632246632152,0,0,0,0.46480320348181,0.142169232487422,0.293600439334847,0.553995408531877,0.200544447470142,0,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0,0.929119112685311,0.28769239232215,0.512321413058201,1.18241114944293,0,0,0,0.564727018627814,0,0.674170453335254,0.612167784741805,0.320929027076094,1.27867425159808,0.329851300186716,0.398927315243264,0.426224750532694,0,0,1.24564449799115,0.502497330513487,0.521482918420201,0,0.605399502633369,0,0.949387162322653,0,0.212604299965044,0,0.112328631146495,0.450530678524519,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0.786839080455332,0.393010762749165,0.822405995998037,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0.25618263945135,0.650296737799391,0.328875809207352,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,1.30216690771284,0,0.451725357233318,0,0,0,0.821127996921047,1.00803371612366,1.06976078313403,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0.515281080091258,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,1.1240175325762,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:126684635..126684641,+ | |||
|id=chr10:126684635..126684641,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.51e-08!172;CL:0000566!1.51e-08!172;CL:0002087!4.66e-08!119;CL:0002032!8.07e-08!165;CL:0000837!8.07e-08!165;CL:0000988!1.06e-07!182;CL:0000738!1.96e-07!140;CL:0002031!3.03e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.74e-09;1!CL:0002625;5.74e-09;1!CL:0000216;5.74e-09;1!CL:0000625;8.99e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.31e-09,1;CL:0002625,3.31e-09,1;CL:0000216,3.31e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.21e-09;1 | |||
|ontology_enrichment_disease=DOID:162!2.24e-19!235;DOID:14566!1.51e-18!239;DOID:0050687!1.82e-12!143;DOID:0050686!5.82e-10!137;DOID:305!5.07e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3307;3.56e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.57e-17,2 | |||
|ontology_enrichment_uberon= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.89e-09,1;UBERON:0001785,1.89e-09,1;UBERON:0002464,1.89e-09,1;UBERON:0004904,1.89e-09,1;UBERON:0001021,1.89e-09,1;UBERON:0003902,1.89e-09,1;UBERON:0005425,1.89e-09,1;UBERON:0005418,2.04e-09,1;UBERON:0001389,2.04e-09,1;UBERON:0000026,2.04e-09,1;UBERON:0008784,2.04e-09,1;UBERON:0006058,2.04e-09,1;UBERON:0003663,2.04e-09,1;UBERON:0004256,2.04e-09,1;UBERON:0004708,2.04e-09,1;UBERON:0002101,2.04e-09,1;UBERON:0004709,2.04e-09,1;UBERON:0002529,2.04e-09,1;UBERON:0010538,2.04e-09,1;UBERON:0003661,2.04e-09,1;UBERON:0010890,2.04e-09,1;UBERON:0002471,2.04e-09,1;UBERON:0001383,2.04e-09,1;UBERON:0004357,2.04e-09,1;UBERON:0004347,2.04e-09,1;UBERON:0005420,2.04e-09,1;UBERON:0005732,2.04e-09,1;UBERON:0010758,2.04e-09,1;UBERON:0010707,2.04e-09,1;UBERON:0000978,2.04e-09,1;UBERON:0002103,2.04e-09,1;UBERON:0001665,2.04e-09,1;UBERON:0003823,2.04e-09,1;UBERON:0000154,2.04e-09,1;UBERON:0010709,2.04e-09,1;UBERON:0005733,2.04e-09,1;UBERON:0005730,2.04e-09,1;UBERON:0001136,3.31e-09,1;UBERON:0001343,3.31e-09,1;UBERON:0004910,3.31e-09,1;UBERON:0005154,3.31e-09,1;UBERON:0005295,3.31e-09,1;UBERON:0004813,3.31e-09,1;UBERON:0005297,3.31e-09,1;UBERON:0005294,3.31e-09,1;UBERON:0010141,3.31e-09,1;UBERON:0005891,3.31e-09,1 | |||
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| |||
|short_description=p@chr10:126684635..126684641,+ | |||
}} |
Revision as of 12:14, 10 September 2013
Short description: | p@chr10:126684635..126684641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126684635..126684641, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.31e-09 | 1 |
seminiferous tubule epithelial cell | 3.31e-09 | 1 |
Sertoli cell | 3.31e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.57e-17 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.